RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 PRAM1Q96QH2 718 aa8.39□□□□□ -1.07
HMGB1P20-201ENST00000402555 SGIP1Q9BQI5 828 aa8.39□□□□□ -1.07
HMGB1P20-201ENST00000402555 TRAK1Q9UPV9 953 aa8.39□□□□□ -1.07
HMGB1P20-201ENST00000402555 SHPRHQ149N8 1683 aa8.39□□□□□ -1.07
HMGB1P20-201ENST00000402555 FMN2Q9NZ56 1722 aa8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 SOCS7O14512 581 aa8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 C7P10643 843 aa8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 TIE1P35590 1138 aa8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 VASPP50552 380 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 ATN1P54259 1190 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 XPCQ01831 940 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 SLC39A7Q92504 469 aa8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 SIN3AQ96ST3 1273 aa8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 BMP2KQ9NSY1 1161 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 POGKQ9P215 609 aa8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 METRNQ9UJH8 293 aa8.38□□□□□ -1.07
HMGB1P20-201ENST00000402555 SPATA31A6Q5VVP1 1343 aa8.37□□□□□ -1.07
HMGB1P20-201ENST00000402555 POTEAQ6S8J7 498 aa8.37□□□□□ -1.07
HMGB1P20-201ENST00000402555 SIRT1Q96EB6 747 aa8.37□□□□□ -1.07
HMGB1P20-201ENST00000402555 HIRIP3Q9BW71 556 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P20-201ENST00000402555 DLC1Q96QB1 1528 aa8.37□□□□□ -1.07
HMGB1P20-201ENST00000402555 PNPLA6Q8IY17 1366 aa8.36□□□□□ -1.07
HMGB1P20-201ENST00000402555 RGPD8O14715 1765 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P20-201ENST00000402555 FOXO3O43524 673 aa8.36□□□□□ -1.07
HMGB1P20-201ENST00000402555 NEUROD1Q13562 356 aa8.36□□□□□ -1.07
HMGB1P20-201ENST00000402555 MEX3CQ5U5Q3 659 aaKnown RBP8.36□□□□□ -1.07
HMGB1P20-201ENST00000402555 LRRC59Q96AG4 307 aaKnown RBP8.36□□□□□ -1.07
HMGB1P20-201ENST00000402555 SOS2Q07890 1332 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P20-201ENST00000402555 MINK1Q8N4C8 1332 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P20-201ENST00000402555 TRIM26Q12899 539 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P20-201ENST00000402555 NBPF1Q3BBV0 1214 aa8.35□□□□□ -1.07
HMGB1P20-201ENST00000402555 OTUD5Q96G74 571 aa8.35□□□□□ -1.07
HMGB1P20-201ENST00000402555 STAC3Q96MF2 364 aa8.35□□□□□ -1.07
HMGB1P20-201ENST00000402555 PCDHB13Q9Y5F0 798 aa8.35□□□□□ -1.07
HMGB1P20-201ENST00000402555 NPHP3Q7Z494 1330 aa8.34□□□□□ -1.07
HMGB1P20-201ENST00000402555 PXDNQ92626 1479 aa8.34□□□□□ -1.07
HMGB1P20-201ENST00000402555 L3MBTL2Q969R5 705 aa8.34□□□□□ -1.07
HMGB1P20-201ENST00000402555 ARHGEF28Q8N1W1 1705 aaKnown RBP8.34□□□□□ -1.07
HMGB1P20-201ENST00000402555 USP32Q8NFA0 1604 aa8.33□□□□□ -1.08
HMGB1P20-201ENST00000402555 TTLL13PA6NNM8 815 aa8.33□□□□□ -1.08
HMGB1P20-201ENST00000402555 ADGRB2O60241 1585 aa8.33□□□□□ -1.08
HMGB1P20-201ENST00000402555 ADAMTS2O95450 1211 aa8.33□□□□□ -1.08
HMGB1P20-201ENST00000402555 PRR36Q9H6K5 1346 aa8.32□□□□□ -1.08
HMGB1P20-201ENST00000402555 KIAA1210Q9ULL0 1709 aa8.32□□□□□ -1.08
HMGB1P20-201ENST00000402555 IFNL1Q8IU54 200 aa8.32□□□□□ -1.08
HMGB1P20-201ENST00000402555 PMFBP1Q8TBY8 1022 aa8.32□□□□□ -1.08
HMGB1P20-201ENST00000402555 C8orf37Q96NL8 207 aa8.32□□□□□ -1.08
HMGB1P20-201ENST00000402555 PHF8Q9UPP1 1060 aa8.32□□□□□ -1.08
HMGB1P20-201ENST00000402555 KIF1AQ12756 1690 aa8.32□□□□□ -1.08
HMGB1P20-201ENST00000402555 AFF2P51816 1311 aa8.31□□□□□ -1.08
HMGB1P20-201ENST00000402555 WASLO00401 505 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P20-201ENST00000402555 KRT28Q7Z3Y7 464 aa8.31□□□□□ -1.08
HMGB1P20-201ENST00000402555 ANKARQ7Z5J8 1434 aa8.3□□□□□ -1.08
HMGB1P20-201ENST00000402555 COL22A1Q8NFW1 1626 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P20-201ENST00000402555 POTEJP0CG39 1038 aa8.3□□□□□ -1.08
HMGB1P20-201ENST00000402555 DCAF8Q5TAQ9 597 aa8.3□□□□□ -1.08
HMGB1P20-201ENST00000402555 ZNF772Q68DY9 489 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P20-201ENST00000402555 SPATA31A3Q5VYP0 1347 aa8.29□□□□□ -1.08
HMGB1P20-201ENST00000402555 TULP4Q9NRJ4 1543 aa8.29□□□□□ -1.08
HMGB1P20-201ENST00000402555 POTEFA5A3E0 1075 aa8.29□□□□□ -1.08
HMGB1P20-201ENST00000402555 NBPF8Q3BBV2 869 aa8.29□□□□□ -1.08
HMGB1P20-201ENST00000402555 LMOD2Q6P5Q4 547 aa8.29□□□□□ -1.08
HMGB1P20-201ENST00000402555 NGLY1Q96IV0 654 aa8.29□□□□□ -1.08
HMGB1P20-201ENST00000402555 TRPM1Q7Z4N2 1603 aa8.29□□□□□ -1.08
HMGB1P20-201ENST00000402555 ATP7BP35670 1465 aa8.28□□□□□ -1.08
HMGB1P20-201ENST00000402555 PSME1Q06323 249 aa8.28□□□□□ -1.08
HMGB1P20-201ENST00000402555 KLHL34Q8N239 644 aa8.28□□□□□ -1.08
HMGB1P20-201ENST00000402555 CABLES1Q8TDN4 633 aa8.28□□□□□ -1.08
HMGB1P20-201ENST00000402555 NUDT16Q96DE0 195 aaKnown RBP8.28□□□□□ -1.08
HMGB1P20-201ENST00000402555 CDK19Q9BWU1 502 aa8.28□□□□□ -1.08
HMGB1P20-201ENST00000402555 TNS3Q68CZ2 1445 aa8.28□□□□□ -1.08
HMGB1P20-201ENST00000402555 CENPJQ9HC77 1338 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P20-201ENST00000402555 EIF3AQ14152 1382 aaKnown RBP8.27□□□□□ -1.09
HMGB1P20-201ENST00000402555 NGDNQ8NEJ9 315 aaKnown RBP8.27□□□□□ -1.09
HMGB1P20-201ENST00000402555 QRICH2Q9H0J4 1663 aa8.27□□□□□ -1.09
HMGB1P20-201ENST00000402555 TRPM3Q9HCF6 1732 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P20-201ENST00000402555 SBNO1A3KN83 1393 aa8.26□□□□□ -1.09
HMGB1P20-201ENST00000402555 ROCK2O75116 1388 aaKnown RBP8.26□□□□□ -1.09
HMGB1P20-201ENST00000402555 TONSLQ96HA7 1378 aa8.26□□□□□ -1.09
HMGB1P20-201ENST00000402555 PYGBP11216 843 aa8.26□□□□□ -1.09
HMGB1P20-201ENST00000402555 RXRBP28702 533 aa8.26□□□□□ -1.09
HMGB1P20-201ENST00000402555 QTRT2Q9H974 415 aaKnown RBP8.26□□□□□ -1.09
HMGB1P20-201ENST00000402555 USP21Q9UK80 565 aa8.26□□□□□ -1.09
HMGB1P20-201ENST00000402555 TRIM35Q9UPQ4 493 aa8.26□□□□□ -1.09
HMGB1P20-201ENST00000402555 MARF1Q9Y4F3 1742 aaKnown RBP8.26□□□□□ -1.09
HMGB1P20-201ENST00000402555 GPRASP1Q5JY77 1395 aa8.25□□□□□ -1.09
HMGB1P20-201ENST00000402555 TOPAZ1Q8N9V7 1692 aa8.25□□□□□ -1.09
HMGB1P20-201ENST00000402555 HAP1P54257 671 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P20-201ENST00000402555 SRPK2P78362 688 aaKnown RBP8.25□□□□□ -1.09
HMGB1P20-201ENST00000402555 GSE1Q14687 1217 aa8.25□□□□□ -1.09
HMGB1P20-201ENST00000402555 IER5LQ5T953 404 aa8.25□□□□□ -1.09
HMGB1P20-201ENST00000402555 CABP2Q9NPB3 220 aa8.25□□□□□ -1.09
HMGB1P20-201ENST00000402555 ITSN1Q15811 1721 aa8.25□□□□□ -1.09
HMGB1P20-201ENST00000402555 ABCA3Q99758 1704 aa8.25□□□□□ -1.09
HMGB1P20-201ENST00000402555 RGS12O14924 1447 aa8.24□□□□□ -1.09
HMGB1P20-201ENST00000402555 MAMSTRQ6ZN01 415 aa8.24□□□□□ -1.09
HMGB1P20-201ENST00000402555 IFNLR1Q8IU57 520 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P20-201ENST00000402555 FNBP4Q8N3X1 1017 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P20-201ENST00000402555 TMEM106CQ9BVX2 250 aa8.24□□□□□ -1.09
HMGB1P20-201ENST00000402555 PCGF6Q9BYE7 350 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms