RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
TOP3B-202ENST00000398793 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
TOP3B-202ENST00000398793 AMPHP49418 695 aa17.18■□□□□ 0.34
TOP3B-202ENST00000398793 AEBP1Q8IUX7 1158 aa17.17■□□□□ 0.34
TOP3B-202ENST00000398793 QRICH2Q9H0J4 1663 aa17.17■□□□□ 0.34
TOP3B-202ENST00000398793 B4GALNT3Q6L9W6 998 aa17.17■□□□□ 0.34
TOP3B-202ENST00000398793 ATAD2Q6PL18 1390 aa17.17■□□□□ 0.34
TOP3B-202ENST00000398793 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
TOP3B-202ENST00000398793 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
TOP3B-202ENST00000398793 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
TOP3B-202ENST00000398793 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
TOP3B-202ENST00000398793 TCP11L2Q8N4U5 519 aa17.16■□□□□ 0.34
TOP3B-202ENST00000398793 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
TOP3B-202ENST00000398793 NLRP1Q9C000 1473 aa17.15■□□□□ 0.34
TOP3B-202ENST00000398793 USP35Q9P2H5 1018 aa17.15■□□□□ 0.34
TOP3B-202ENST00000398793 POLKQ9UBT6 870 aa17.15■□□□□ 0.34
TOP3B-202ENST00000398793 PPP4R2Q9NY27 417 aa17.14■□□□□ 0.34
TOP3B-202ENST00000398793 SETD1BQ9UPS6 1966 aaKnown RBP17.14■□□□□ 0.33
TOP3B-202ENST00000398793 CHRNA2Q15822 529 aa17.14■□□□□ 0.33
TOP3B-202ENST00000398793 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
TOP3B-202ENST00000398793 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
TOP3B-202ENST00000398793 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
TOP3B-202ENST00000398793 ZNF428Q96B54 188 aa17.14■□□□□ 0.33
TOP3B-202ENST00000398793 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
TOP3B-202ENST00000398793 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
TOP3B-202ENST00000398793 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
TOP3B-202ENST00000398793 A0A0G2JS52 829 aa17.13■□□□□ 0.33
TOP3B-202ENST00000398793 FAM83GA6ND36 823 aa17.13■□□□□ 0.33
TOP3B-202ENST00000398793 FRAT1Q92837 279 aaPredicted RBP17.13■□□□□ 0.33
TOP3B-202ENST00000398793 ANP32AP39687 249 aaKnown RBP17.12■□□□□ 0.33
TOP3B-202ENST00000398793 IFT172Q9UG01 1749 aa17.12■□□□□ 0.33
TOP3B-202ENST00000398793 ZBED9Q6R2W3 1325 aa17.11■□□□□ 0.33
TOP3B-202ENST00000398793 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
TOP3B-202ENST00000398793 UBR1Q8IWV7 1749 aa17.11■□□□□ 0.33
TOP3B-202ENST00000398793 PHACTR3Q96KR7 559 aa17.11■□□□□ 0.33
TOP3B-202ENST00000398793 NPHP4O75161 1426 aaPredicted RBP17.11■□□□□ 0.33
TOP3B-202ENST00000398793 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
TOP3B-202ENST00000398793 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
TOP3B-202ENST00000398793 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
TOP3B-202ENST00000398793 CEP170BQ9Y4F5 1589 aaPredicted RBP17.1■□□□□ 0.33
TOP3B-202ENST00000398793 TMEM94Q12767 1356 aa17.1■□□□□ 0.33
TOP3B-202ENST00000398793 CLUAP1Q96AJ1 413 aa17.1■□□□□ 0.33
TOP3B-202ENST00000398793 IPO9Q96P70 1041 aaKnown RBP17.1■□□□□ 0.33
TOP3B-202ENST00000398793 NUDCQ9Y266 331 aa17.1■□□□□ 0.33
TOP3B-202ENST00000398793 LRRC59Q96AG4 307 aaKnown RBP17.09■□□□□ 0.33
TOP3B-202ENST00000398793 SKAP1Q86WV1 359 aa17.08■□□□□ 0.32
TOP3B-202ENST00000398793 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
TOP3B-202ENST00000398793 ARHGEF28Q8N1W1 1705 aaKnown RBP17.07■□□□□ 0.32
TOP3B-202ENST00000398793 RIPK4P57078 832 aa17.07■□□□□ 0.32
TOP3B-202ENST00000398793 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
TOP3B-202ENST00000398793 SBNO2Q9Y2G9 1366 aa17.06■□□□□ 0.32
TOP3B-202ENST00000398793 NEFMP07197 916 aa17.06■□□□□ 0.32
TOP3B-202ENST00000398793 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
TOP3B-202ENST00000398793 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
TOP3B-202ENST00000398793 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
TOP3B-202ENST00000398793 BCAR3O75815 825 aa17.05■□□□□ 0.32
TOP3B-202ENST00000398793 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
TOP3B-202ENST00000398793 SRCAPQ6ZRS2 3230 aa17.04■□□□□ 0.32
TOP3B-202ENST00000398793 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
TOP3B-202ENST00000398793 MAP3K19Q56UN5 1328 aa17.04■□□□□ 0.32
TOP3B-202ENST00000398793 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 RCAN3Q9UKA8 241 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 CSB-PGBD3P0DP91 1061 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 MCM10Q7L590 875 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
TOP3B-202ENST00000398793 CPS1P31327 1500 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 C19orf44Q9H6X5 657 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 PODXL2Q9NZ53 605 aa17.03■□□□□ 0.32
TOP3B-202ENST00000398793 NUTM2BA6NNL0 878 aaPredicted RBP17.01■□□□□ 0.31
TOP3B-202ENST00000398793 NUTM2EB1AL46 878 aaPredicted RBP17.01■□□□□ 0.31
TOP3B-202ENST00000398793 NUTM2AQ8IVF1 878 aaPredicted RBP17.01■□□□□ 0.31
TOP3B-202ENST00000398793 CD163L1Q9NR16 1453 aa17.01■□□□□ 0.31
TOP3B-202ENST00000398793 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
TOP3B-202ENST00000398793 STRN4Q9NRL3 753 aa17.01■□□□□ 0.31
TOP3B-202ENST00000398793 TNNQ9UQP3 1299 aa17.01■□□□□ 0.31
TOP3B-202ENST00000398793 GOLGB1Q14789 3259 aaKnown RBP17.01■□□□□ 0.31
TOP3B-202ENST00000398793 KRT24Q2M2I5 525 aa17■□□□□ 0.31
TOP3B-202ENST00000398793 RUNDC1Q96C34 613 aa17■□□□□ 0.31
TOP3B-202ENST00000398793 WWC1Q8IX03 1113 aa17■□□□□ 0.31
TOP3B-202ENST00000398793 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
TOP3B-202ENST00000398793 MYOM1P52179 1685 aa16.99■□□□□ 0.31
TOP3B-202ENST00000398793 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
TOP3B-202ENST00000398793 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.98■□□□□ 0.31
TOP3B-202ENST00000398793 ATP7BP35670 1465 aa16.97■□□□□ 0.31
TOP3B-202ENST00000398793 ADAMTS2O95450 1211 aa16.97■□□□□ 0.31
TOP3B-202ENST00000398793 NLRP2Q9NX02 1062 aa16.97■□□□□ 0.31
TOP3B-202ENST00000398793 LAMC1P11047 1609 aa16.97■□□□□ 0.31
TOP3B-202ENST00000398793 PLEKHG3A1L390 1219 aa16.96■□□□□ 0.31
TOP3B-202ENST00000398793 GLIPR1L2Q4G1C9 344 aa16.96■□□□□ 0.31
TOP3B-202ENST00000398793 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
TOP3B-202ENST00000398793 KIAA1210Q9ULL0 1709 aa16.96■□□□□ 0.31
TOP3B-202ENST00000398793 ARHGAP23Q9P227 1491 aa16.95■□□□□ 0.3
TOP3B-202ENST00000398793 POLR1AO95602 1720 aaPredicted RBP16.95■□□□□ 0.3
TOP3B-202ENST00000398793 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
TOP3B-202ENST00000398793 GCP02774 474 aa16.94■□□□□ 0.3
TOP3B-202ENST00000398793 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
TOP3B-202ENST00000398793 AXIN2Q9Y2T1 843 aa16.94■□□□□ 0.3
TOP3B-202ENST00000398793 ADAMTSL3P82987 1691 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms