RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 KLHL40Q2TBA0 621 aa18.67■□□□□ 0.58
CYLD-202ENST00000398568 NUTM2DQ5VT03 806 aaPredicted RBP18.67■□□□□ 0.58
CYLD-202ENST00000398568 DDIT3P35638 169 aa18.67■□□□□ 0.58
CYLD-202ENST00000398568 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
CYLD-202ENST00000398568 DNTTIP2Q5QJE6 756 aaKnown RBP18.66■□□□□ 0.58
CYLD-202ENST00000398568 IBTKQ9P2D0 1353 aaPredicted RBP18.66■□□□□ 0.58
CYLD-202ENST00000398568 GTF2E1P29083 439 aaPredicted RBP18.65■□□□□ 0.58
CYLD-202ENST00000398568 NAP1L2Q9ULW6 460 aaPredicted RBP18.65■□□□□ 0.58
CYLD-202ENST00000398568 LETM1O95202 739 aaPredicted RBP18.65■□□□□ 0.58
CYLD-202ENST00000398568 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
CYLD-202ENST00000398568 CCDC39Q9UFE4 941 aa18.64■□□□□ 0.57
CYLD-202ENST00000398568 STAC3Q96MF2 364 aa18.64■□□□□ 0.57
CYLD-202ENST00000398568 NCOA3Q9Y6Q9 1424 aa18.64■□□□□ 0.57
CYLD-202ENST00000398568 CBX1P83916 185 aa18.63■□□□□ 0.57
CYLD-202ENST00000398568 DISP3Q9P2K9 1392 aa18.63■□□□□ 0.57
CYLD-202ENST00000398568 NGEFQ8N5V2 710 aa18.63■□□□□ 0.57
CYLD-202ENST00000398568 NBPF1Q3BBV0 1214 aa18.62■□□□□ 0.57
CYLD-202ENST00000398568 ZNF445P59923 1031 aa18.62■□□□□ 0.57
CYLD-202ENST00000398568 PTMAP06454 111 aaKnown RBP18.61■□□□□ 0.57
CYLD-202ENST00000398568 SSFA2P28290 1259 aa18.61■□□□□ 0.57
CYLD-202ENST00000398568 CAVIN1Q6NZI2 390 aaKnown RBP18.61■□□□□ 0.57
CYLD-202ENST00000398568 FAM135AQ9P2D6 1515 aa18.6■□□□□ 0.57
CYLD-202ENST00000398568 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.6■□□□□ 0.57
CYLD-202ENST00000398568 MADDQ8WXG6 1647 aa18.59■□□□□ 0.57
CYLD-202ENST00000398568 HSPA2P54652 639 aa18.59■□□□□ 0.57
CYLD-202ENST00000398568 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
CYLD-202ENST00000398568 PDLIM2Q96JY6 352 aa18.59■□□□□ 0.57
CYLD-202ENST00000398568 RBM25P49756 843 aaKnown RBP18.58■□□□□ 0.57
CYLD-202ENST00000398568 TESK2Q96S53 571 aa18.58■□□□□ 0.57
CYLD-202ENST00000398568 BAG4O95429 457 aaKnown RBP18.58■□□□□ 0.57
CYLD-202ENST00000398568 RBSNQ9H1K0 784 aa18.58■□□□□ 0.57
CYLD-202ENST00000398568 TAF3Q5VWG9 929 aa18.58■□□□□ 0.56
CYLD-202ENST00000398568 CLTCQ00610 1675 aaKnown RBP18.58■□□□□ 0.56
CYLD-202ENST00000398568 CEP152O94986 1710 aa18.58■□□□□ 0.56
CYLD-202ENST00000398568 CHMP4BQ9H444 224 aaKnown RBP18.57■□□□□ 0.56
CYLD-202ENST00000398568 NPATQ14207 1427 aa18.57■□□□□ 0.56
CYLD-202ENST00000398568 ZSCAN23Q3MJ62 389 aa18.57■□□□□ 0.56
CYLD-202ENST00000398568 MYRIPQ8NFW9 859 aa18.57■□□□□ 0.56
CYLD-202ENST00000398568 IDI1Q13907 227 aa18.57■□□□□ 0.56
CYLD-202ENST00000398568 MROH1Q8NDA8 1641 aa18.56■□□□□ 0.56
CYLD-202ENST00000398568 K7ELQ4 463 aaPredicted RBP18.56■□□□□ 0.56
CYLD-202ENST00000398568 KIAA2012Q0VF49 1180 aa18.56■□□□□ 0.56
CYLD-202ENST00000398568 MCTP1Q6DN14 999 aa18.56■□□□□ 0.56
CYLD-202ENST00000398568 AGLP35573 1532 aa18.56■□□□□ 0.56
CYLD-202ENST00000398568 RARSP54136 660 aaKnown RBP18.56■□□□□ 0.56
CYLD-202ENST00000398568 ABCC3O15438 1527 aa18.56■□□□□ 0.56
CYLD-202ENST00000398568 RLBP1P12271 317 aa18.56■□□□□ 0.56
CYLD-202ENST00000398568 CDK11BP21127 795 aaKnown RBP18.56■□□□□ 0.56
CYLD-202ENST00000398568 HMGN5P82970 282 aaKnown RBP18.56■□□□□ 0.56
CYLD-202ENST00000398568 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
CYLD-202ENST00000398568 RIMS1Q86UR5 1692 aaKnown RBP18.55■□□□□ 0.56
CYLD-202ENST00000398568 ZBTB7CA1YPR0 619 aa18.55■□□□□ 0.56
CYLD-202ENST00000398568 FTSJ3Q8IY81 847 aaKnown RBP18.54■□□□□ 0.56
CYLD-202ENST00000398568 BCL2L13Q9BXK5 485 aa18.54■□□□□ 0.56
CYLD-202ENST00000398568 UGGT1Q9NYU2 1555 aa18.54■□□□□ 0.56
CYLD-202ENST00000398568 PRIMPOLQ96LW4 560 aa18.53■□□□□ 0.56
CYLD-202ENST00000398568 PRAG1Q86YV5 1406 aa18.53■□□□□ 0.56
CYLD-202ENST00000398568 PRIM1P49642 420 aaKnown RBP18.53■□□□□ 0.56
CYLD-202ENST00000398568 IPO4Q8TEX9 1081 aaKnown RBP18.53■□□□□ 0.56
CYLD-202ENST00000398568 TNNQ9UQP3 1299 aa18.53■□□□□ 0.56
CYLD-202ENST00000398568 KDM5DQ9BY66 1539 aa18.52■□□□□ 0.55
CYLD-202ENST00000398568 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.55
CYLD-202ENST00000398568 WWC1Q8IX03 1113 aa18.52■□□□□ 0.55
CYLD-202ENST00000398568 PTPRMP28827 1452 aa18.51■□□□□ 0.55
CYLD-202ENST00000398568 NEUROD2Q15784 382 aa18.51■□□□□ 0.55
CYLD-202ENST00000398568 CLEC17AQ6ZS10 378 aa18.51■□□□□ 0.55
CYLD-202ENST00000398568 PIK3C2GO75747 1445 aa18.51■□□□□ 0.55
CYLD-202ENST00000398568 PRDM15P57071 1507 aaPredicted RBP18.51■□□□□ 0.55
CYLD-202ENST00000398568 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
CYLD-202ENST00000398568 FER1L4A9Z1Z3 1794 aa18.5■□□□□ 0.55
CYLD-202ENST00000398568 NUCB2P80303 420 aa18.5■□□□□ 0.55
CYLD-202ENST00000398568 PPP6R1Q9UPN7 881 aa18.5■□□□□ 0.55
CYLD-202ENST00000398568 REREQ9P2R6 1566 aa18.5■□□□□ 0.55
CYLD-202ENST00000398568 EIF2AK4Q9P2K8 1649 aaKnown RBP18.5■□□□□ 0.55
CYLD-202ENST00000398568 TMEM51Q9NW97 253 aa18.49■□□□□ 0.55
CYLD-202ENST00000398568 CDCA8Q53HL2 280 aa18.49■□□□□ 0.55
CYLD-202ENST00000398568 GPRASP1Q5JY77 1395 aa18.48■□□□□ 0.55
CYLD-202ENST00000398568 KIF3AQ9Y496 699 aa18.48■□□□□ 0.55
CYLD-202ENST00000398568 ZNF771Q7L3S4 317 aaPredicted RBP18.48■□□□□ 0.55
CYLD-202ENST00000398568 GAS2L2Q8NHY3 880 aa18.48■□□□□ 0.55
CYLD-202ENST00000398568 UNC13BO14795 1591 aa18.48■□□□□ 0.55
CYLD-202ENST00000398568 TSC1Q92574 1164 aa18.48■□□□□ 0.55
CYLD-202ENST00000398568 TNRQ92752 1358 aa18.47■□□□□ 0.55
CYLD-202ENST00000398568 RNF17Q9BXT8 1623 aaKnown RBP18.47■□□□□ 0.55
CYLD-202ENST00000398568 TAF7LQ5H9L4 462 aa18.46■□□□□ 0.55
CYLD-202ENST00000398568 ZKSCAN2Q63HK3 967 aa18.46■□□□□ 0.55
CYLD-202ENST00000398568 CGNQ9P2M7 1197 aaKnown RBP18.46■□□□□ 0.55
CYLD-202ENST00000398568 ATP2B3Q16720 1220 aa18.46■□□□□ 0.55
CYLD-202ENST00000398568 DZIP1LQ8IYY4 767 aaKnown RBP18.46■□□□□ 0.55
CYLD-202ENST00000398568 PDCL2Q8N4E4 241 aa18.46■□□□□ 0.55
CYLD-202ENST00000398568 SPDYE4A6NLX3 237 aa18.45■□□□□ 0.54
CYLD-202ENST00000398568 LMBRD1Q9NUN5 540 aa18.45■□□□□ 0.54
CYLD-202ENST00000398568 LRSAM1Q6UWE0 723 aa18.45■□□□□ 0.54
CYLD-202ENST00000398568 ZNF710Q8N1W2 664 aa18.45■□□□□ 0.54
CYLD-202ENST00000398568 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
CYLD-202ENST00000398568 PRPF40AO75400 957 aaKnown RBP18.45■□□□□ 0.54
CYLD-202ENST00000398568 PLA2R1Q13018 1463 aa18.45■□□□□ 0.54
CYLD-202ENST00000398568 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
CYLD-202ENST00000398568 KIF16BQ96L93 1317 aa18.44■□□□□ 0.54
CYLD-202ENST00000398568 HDAC1Q13547 482 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms