RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 SPC24Q8NBT2 197 aa19.12■□□□□ 0.65
ATP2A3-205ENST00000397041 TNNT3P45378 269 aaPredicted RBP19.12■□□□□ 0.65
ATP2A3-205ENST00000397041 CDK19Q9BWU1 502 aa19.11■□□□□ 0.65
ATP2A3-205ENST00000397041 ADGRF5Q8IZF2 1346 aa19.11■□□□□ 0.65
ATP2A3-205ENST00000397041 XRCC6P12956 609 aaKnown RBP eCLIP19.11■□□□□ 0.651e-8■■□□□ 12.6
ATP2A3-205ENST00000397041 CWC22Q9HCG8 908 aaKnown RBP19.11■□□□□ 0.65
ATP2A3-205ENST00000397041 SYCE3A1L190 88 aa19.11■□□□□ 0.65
ATP2A3-205ENST00000397041 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
ATP2A3-205ENST00000397041 PARD3Q8TEW0 1356 aa19.11■□□□□ 0.65
ATP2A3-205ENST00000397041 ZSCAN30Q86W11 494 aa19.1■□□□□ 0.65
ATP2A3-205ENST00000397041 TOMM22Q9NS69 142 aa19.1■□□□□ 0.65
ATP2A3-205ENST00000397041 MAP4K4O95819 1239 aaPredicted RBP19.1■□□□□ 0.65
ATP2A3-205ENST00000397041 SASS6Q6UVJ0 657 aa19.1■□□□□ 0.65
ATP2A3-205ENST00000397041 ZNF428Q96B54 188 aa19.1■□□□□ 0.65
ATP2A3-205ENST00000397041 SMARCA5O60264 1052 aaPredicted RBP19.1■□□□□ 0.65
ATP2A3-205ENST00000397041 PLEKHH1Q9ULM0 1364 aa19.1■□□□□ 0.65
ATP2A3-205ENST00000397041 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
ATP2A3-205ENST00000397041 RRP9O43818 475 aaKnown RBP19.09■□□□□ 0.65
ATP2A3-205ENST00000397041 RRS1Q15050 365 aaKnown RBP19.09■□□□□ 0.65
ATP2A3-205ENST00000397041 DCTN1Q14203 1278 aa19.09■□□□□ 0.65
ATP2A3-205ENST00000397041 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
ATP2A3-205ENST00000397041 UQCRHLA0A096LP55 91 aa19.09■□□□□ 0.65
ATP2A3-205ENST00000397041 UQCRHP07919 91 aa19.09■□□□□ 0.65
ATP2A3-205ENST00000397041 G3BP1Q13283 466 aaKnown RBP eCLIP19.09■□□□□ 0.65
ATP2A3-205ENST00000397041 MAP7D2Q96T17 732 aa19.09■□□□□ 0.65
ATP2A3-205ENST00000397041 GNAI3P08754 354 aa19.08■□□□□ 0.65
ATP2A3-205ENST00000397041 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.65
ATP2A3-205ENST00000397041 GNAI2P04899 355 aa19.08■□□□□ 0.64
ATP2A3-205ENST00000397041 MCM2P49736 904 aa19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 MAGI1Q96QZ7 1491 aaPredicted RBP19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 NPHP1O15259 732 aa19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 C1orf141Q5JVX7 400 aa19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 RNF20Q5VTR2 975 aa19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 CCDC141Q6ZP82 1450 aa19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 UPF3BQ9BZI7 483 aaKnown RBP19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 AIMP1Q12904 312 aaKnown RBP19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 TRIM5Q9C035 493 aa19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 EXOC6BQ9Y2D4 811 aa19.07■□□□□ 0.64
ATP2A3-205ENST00000397041 PER1O15534 1290 aaPredicted RBP19.06■□□□□ 0.64
ATP2A3-205ENST00000397041 RLBP1P12271 317 aa19.06■□□□□ 0.64
ATP2A3-205ENST00000397041 FCHSD2O94868 740 aa19.06■□□□□ 0.64
ATP2A3-205ENST00000397041 IL1RAPL2Q9NP60 686 aa19.06■□□□□ 0.64
ATP2A3-205ENST00000397041 UGGT2Q9NYU1 1516 aa19.06■□□□□ 0.64
ATP2A3-205ENST00000397041 CUL7Q14999 1698 aa19.06■□□□□ 0.64
ATP2A3-205ENST00000397041 HOMER1Q86YM7 354 aa19.06■□□□□ 0.64
ATP2A3-205ENST00000397041 TESK2Q96S53 571 aa19.06■□□□□ 0.64
ATP2A3-205ENST00000397041 XPCQ01831 940 aaPredicted RBP19.05■□□□□ 0.64
ATP2A3-205ENST00000397041 NEXNQ0ZGT2 675 aa19.05■□□□□ 0.64
ATP2A3-205ENST00000397041 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
ATP2A3-205ENST00000397041 MIS18AQ9NYP9 233 aa19.04■□□□□ 0.64
ATP2A3-205ENST00000397041 RNF123Q5XPI4 1314 aa19.04■□□□□ 0.64
ATP2A3-205ENST00000397041 CNTROBQ8N137 903 aa19.04■□□□□ 0.64
ATP2A3-205ENST00000397041 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
ATP2A3-205ENST00000397041 LRRCC1Q9C099 1032 aa19.04■□□□□ 0.64
ATP2A3-205ENST00000397041 NFE2L2Q16236 605 aa19.03■□□□□ 0.64
ATP2A3-205ENST00000397041 RALGAPBQ86X10 1494 aa19.03■□□□□ 0.64
ATP2A3-205ENST00000397041 TBC1D9Q6ZT07 1266 aa19.03■□□□□ 0.64
ATP2A3-205ENST00000397041 HSP90AB4PQ58FF6 505 aa19.03■□□□□ 0.64
ATP2A3-205ENST00000397041 MTERF4Q7Z6M4 381 aaKnown RBP19.03■□□□□ 0.64
ATP2A3-205ENST00000397041 NLRP6P59044 892 aa19.02■□□□□ 0.64
ATP2A3-205ENST00000397041 CEBPZQ03701 1054 aaKnown RBP19.02■□□□□ 0.64
ATP2A3-205ENST00000397041 CCDC30Q5VVM6 783 aa19.02■□□□□ 0.64
ATP2A3-205ENST00000397041 IFT140Q96RY7 1462 aa19.02■□□□□ 0.63
ATP2A3-205ENST00000397041 MRC2Q9UBG0 1479 aa19.01■□□□□ 0.63
ATP2A3-205ENST00000397041 CCDC73Q6ZRK6 1079 aa19.01■□□□□ 0.63
ATP2A3-205ENST00000397041 GPATCH8Q9UKJ3 1502 aaKnown RBP19.01■□□□□ 0.63
ATP2A3-205ENST00000397041 WDR33Q9C0J8 1336 aaKnown RBP19.01■□□□□ 0.63
ATP2A3-205ENST00000397041 CPLX1O14810 134 aa19■□□□□ 0.63
ATP2A3-205ENST00000397041 FSD1Q9BTV5 496 aa19■□□□□ 0.63
ATP2A3-205ENST00000397041 FBLN1P23142 703 aa19■□□□□ 0.63
ATP2A3-205ENST00000397041 RBM42Q9BTD8 480 aaKnown RBP19■□□□□ 0.63
ATP2A3-205ENST00000397041 HMGN5P82970 282 aaKnown RBP19■□□□□ 0.63
ATP2A3-205ENST00000397041 TPD52L1Q16890 204 aaPredicted RBP19■□□□□ 0.63
ATP2A3-205ENST00000397041 RPAP2Q8IXW5 612 aaPredicted RBP19■□□□□ 0.63
ATP2A3-205ENST00000397041 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
ATP2A3-205ENST00000397041 MCM10Q7L590 875 aa18.99■□□□□ 0.63
ATP2A3-205ENST00000397041 SDF4Q9BRK5 362 aa18.99■□□□□ 0.63
ATP2A3-205ENST00000397041 PES1O00541 588 aaKnown RBP18.99■□□□□ 0.63
ATP2A3-205ENST00000397041 GDPD2Q9HCC8 539 aa18.99■□□□□ 0.63
ATP2A3-205ENST00000397041 RASSF8Q8NHQ8 419 aa18.98■□□□□ 0.63
ATP2A3-205ENST00000397041 FMNL2Q96PY5 1086 aa18.98■□□□□ 0.63
ATP2A3-205ENST00000397041 BAG4O95429 457 aaKnown RBP18.98■□□□□ 0.63
ATP2A3-205ENST00000397041 CCDC34Q96HJ3 373 aa18.98■□□□□ 0.63
ATP2A3-205ENST00000397041 STK3Q13188 491 aa18.98■□□□□ 0.63
ATP2A3-205ENST00000397041 HDGFL1Q5TGJ6 251 aa18.97■□□□□ 0.63
ATP2A3-205ENST00000397041 RBM27Q9P2N5 1060 aaKnown RBP18.97■□□□□ 0.63
ATP2A3-205ENST00000397041 URB2Q14146 1524 aaKnown RBP18.97■□□□□ 0.63
ATP2A3-205ENST00000397041 CCT4P50991 539 aaKnown RBP18.97■□□□□ 0.63
ATP2A3-205ENST00000397041 BMP2KLQ5H9B9 411 aa18.97■□□□□ 0.63
ATP2A3-205ENST00000397041 NEUROD6Q96NK8 337 aa18.97■□□□□ 0.63
ATP2A3-205ENST00000397041 RAPGEF3O95398 923 aa18.97■□□□□ 0.63
ATP2A3-205ENST00000397041 LETM1O95202 739 aaPredicted RBP18.97■□□□□ 0.63
ATP2A3-205ENST00000397041 ALDH1L2Q3SY69 923 aa18.96■□□□□ 0.63
ATP2A3-205ENST00000397041 CWC27Q6UX04 472 aaKnown RBP18.96■□□□□ 0.63
ATP2A3-205ENST00000397041 DDX58O95786 925 aaKnown RBP18.96■□□□□ 0.63
ATP2A3-205ENST00000397041 F6X3S4 739 aa18.96■□□□□ 0.63
ATP2A3-205ENST00000397041 EMILIN1Q9Y6C2 1016 aa18.96■□□□□ 0.63
ATP2A3-205ENST00000397041 SCAF11Q99590 1463 aaKnown RBP18.96■□□□□ 0.63
ATP2A3-205ENST00000397041 NUTM1Q86Y26 1132 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms