RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 BRINP3Q76B58 766 aa19.22■□□□□ 0.67
GAPDH-203ENST00000396858 TTC21BQ7Z4L5 1316 aa19.22■□□□□ 0.67
GAPDH-203ENST00000396858 XPCQ01831 940 aaPredicted RBP19.21■□□□□ 0.67
GAPDH-203ENST00000396858 NME9Q86XW9 330 aa19.21■□□□□ 0.67
GAPDH-203ENST00000396858 ZNF692Q9BU19 519 aaPredicted RBP19.21■□□□□ 0.67
GAPDH-203ENST00000396858 NHSL1Q5SYE7 1610 aa19.21■□□□□ 0.67
GAPDH-203ENST00000396858 GGNBP2Q9H3C7 697 aa19.2■□□□□ 0.66
GAPDH-203ENST00000396858 SLAIN2Q9P270 581 aa19.2■□□□□ 0.66
GAPDH-203ENST00000396858 PXDNQ92626 1479 aa19.2■□□□□ 0.66
GAPDH-203ENST00000396858 OVOS2A0A0J9YW53 1432 aa19.19■□□□□ 0.66
GAPDH-203ENST00000396858 OVOS2Q6IE36 1432 aa19.19■□□□□ 0.66
GAPDH-203ENST00000396858 FOXO3O43524 673 aa19.19■□□□□ 0.66
GAPDH-203ENST00000396858 DDX17Q92841 729 aaKnown RBP19.19■□□□□ 0.66
GAPDH-203ENST00000396858 USP54Q70EL1 1684 aa19.18■□□□□ 0.66
GAPDH-203ENST00000396858 MARF1Q9Y4F3 1742 aaKnown RBP19.18■□□□□ 0.66
GAPDH-203ENST00000396858 FYB1O15117 783 aa19.17■□□□□ 0.66
GAPDH-203ENST00000396858 ZRANB1Q9UGI0 708 aa19.17■□□□□ 0.66
GAPDH-203ENST00000396858 TTC21AQ8NDW8 1320 aa19.17■□□□□ 0.66
GAPDH-203ENST00000396858 BRD4O60885 1362 aaPredicted RBP19.17■□□□□ 0.66
GAPDH-203ENST00000396858 RALBP1Q15311 655 aa19.16■□□□□ 0.66
GAPDH-203ENST00000396858 ALS2Q96Q42 1657 aa19.16■□□□□ 0.66
GAPDH-203ENST00000396858 NPHP3Q7Z494 1330 aa19.16■□□□□ 0.66
GAPDH-203ENST00000396858 MYBBP1AQ9BQG0 1328 aaKnown RBP19.16■□□□□ 0.66
GAPDH-203ENST00000396858 PSME1Q06323 249 aa19.15■□□□□ 0.66
GAPDH-203ENST00000396858 MORC1Q86VD1 984 aa19.15■□□□□ 0.66
GAPDH-203ENST00000396858 AHDC1Q5TGY3 1603 aaPredicted RBP19.14■□□□□ 0.66
GAPDH-203ENST00000396858 PAK3O75914 559 aaPredicted RBP19.14■□□□□ 0.65
GAPDH-203ENST00000396858 TNS3Q68CZ2 1445 aa19.14■□□□□ 0.65
GAPDH-203ENST00000396858 TNNT2P45379 298 aaPredicted RBP19.13■□□□□ 0.65
GAPDH-203ENST00000396858 KRT28Q7Z3Y7 464 aa19.13■□□□□ 0.65
GAPDH-203ENST00000396858 CERKQ8TCT0 537 aa19.13■□□□□ 0.65
GAPDH-203ENST00000396858 USP31Q70CQ4 1352 aa19.12■□□□□ 0.65
GAPDH-203ENST00000396858 SBNO1A3KN83 1393 aa19.11■□□□□ 0.65
GAPDH-203ENST00000396858 COG3Q96JB2 828 aa19.11■□□□□ 0.65
GAPDH-203ENST00000396858 UBAP1LF5GYI3 381 aa19.1■□□□□ 0.65
GAPDH-203ENST00000396858 PPP2R1AP30153 589 aa19.1■□□□□ 0.65
GAPDH-203ENST00000396858 NUTM2GQ5VZR2 741 aa19.1■□□□□ 0.65
GAPDH-203ENST00000396858 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
GAPDH-203ENST00000396858 TOM1O60784 492 aa19.09■□□□□ 0.65
GAPDH-203ENST00000396858 SLIT3O75094 1523 aa19.09■□□□□ 0.65
GAPDH-203ENST00000396858 PHRF1Q9P1Y6 1649 aaKnown RBP19.08■□□□□ 0.65
GAPDH-203ENST00000396858 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.65
GAPDH-203ENST00000396858 CCER2I3L3R5 266 aa19.08■□□□□ 0.64
GAPDH-203ENST00000396858 PIP4K2BP78356 416 aa19.08■□□□□ 0.64
GAPDH-203ENST00000396858 CCDC184Q52MB2 194 aa19.08■□□□□ 0.64
GAPDH-203ENST00000396858 NLRP13Q86W25 1043 aa19.08■□□□□ 0.64
GAPDH-203ENST00000396858 ABTB2Q8N961 1025 aa19.08■□□□□ 0.64
GAPDH-203ENST00000396858 PHLPP1O60346 1717 aa19.08■□□□□ 0.64
GAPDH-203ENST00000396858 COL16A1Q07092 1604 aaPredicted RBP19.07■□□□□ 0.64
GAPDH-203ENST00000396858 SOS2Q07890 1332 aaPredicted RBP19.07■□□□□ 0.64
GAPDH-203ENST00000396858 NFAT5O94916 1531 aa19.07■□□□□ 0.64
GAPDH-203ENST00000396858 LMOD2Q6P5Q4 547 aa19.07■□□□□ 0.64
GAPDH-203ENST00000396858 CRYBG1Q9Y4K1 1723 aa19.07■□□□□ 0.64
GAPDH-203ENST00000396858 NLRP6P59044 892 aa19.06■□□□□ 0.64
GAPDH-203ENST00000396858 ILDR1Q86SU0 546 aaPredicted RBP19.06■□□□□ 0.64
GAPDH-203ENST00000396858 SMG6Q86US8 1419 aaKnown RBP19.06■□□□□ 0.64
GAPDH-203ENST00000396858 ABCA3Q99758 1704 aa19.05■□□□□ 0.64
GAPDH-203ENST00000396858 SPATA31A3Q5VYP0 1347 aa19.05■□□□□ 0.64
GAPDH-203ENST00000396858 SOX12O15370 315 aa19.05■□□□□ 0.64
GAPDH-203ENST00000396858 MRS2Q9HD23 443 aa19.05■□□□□ 0.64
GAPDH-203ENST00000396858 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
GAPDH-203ENST00000396858 USP19O94966 1318 aa19.04■□□□□ 0.64
GAPDH-203ENST00000396858 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
GAPDH-203ENST00000396858 PEAK1Q9H792 1746 aa19.03■□□□□ 0.64
GAPDH-203ENST00000396858 PLEKHG5O94827 1062 aa19.03■□□□□ 0.64
GAPDH-203ENST00000396858 FBLN1P23142 703 aa19.03■□□□□ 0.64
GAPDH-203ENST00000396858 COL3A1P02461 1466 aaPredicted RBP19.02■□□□□ 0.63
GAPDH-203ENST00000396858 CDK12Q9NYV4 1490 aaPredicted RBP19.02■□□□□ 0.63
GAPDH-203ENST00000396858 SHPRHQ149N8 1683 aa19.01■□□□□ 0.63
GAPDH-203ENST00000396858 RRS1Q15050 365 aaKnown RBP19■□□□□ 0.63
GAPDH-203ENST00000396858 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
GAPDH-203ENST00000396858 LTN1O94822 1766 aa18.99■□□□□ 0.63
GAPDH-203ENST00000396858 MTHFSP49914 203 aa18.98■□□□□ 0.63
GAPDH-203ENST00000396858 COL22A1Q8NFW1 1626 aaPredicted RBP18.98■□□□□ 0.63
GAPDH-203ENST00000396858 MAP2P11137 1827 aaKnown RBP18.97■□□□□ 0.63
GAPDH-203ENST00000396858 PNPLA6Q8IY17 1366 aa18.97■□□□□ 0.63
GAPDH-203ENST00000396858 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
GAPDH-203ENST00000396858 MAP3K19Q56UN5 1328 aa18.97■□□□□ 0.63
GAPDH-203ENST00000396858 PPM1GO15355 546 aaPredicted RBP18.95■□□□□ 0.62
GAPDH-203ENST00000396858 CABLES1Q8TDN4 633 aa18.95■□□□□ 0.62
GAPDH-203ENST00000396858 RTL1A6NKG5 1358 aa18.93■□□□□ 0.62
GAPDH-203ENST00000396858 ZBTB7CA1YPR0 619 aa18.93■□□□□ 0.62
GAPDH-203ENST00000396858 KCNH5Q8NCM2 988 aa18.93■□□□□ 0.62
GAPDH-203ENST00000396858 FBXO41Q8TF61 875 aa18.93■□□□□ 0.62
GAPDH-203ENST00000396858 CFAP53Q96M91 514 aa18.93■□□□□ 0.62
GAPDH-203ENST00000396858 FLT4P35916 1363 aa18.93■□□□□ 0.62
GAPDH-203ENST00000396858 GCP02774 474 aa18.92■□□□□ 0.62
GAPDH-203ENST00000396858 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
GAPDH-203ENST00000396858 LRRC59Q96AG4 307 aaKnown RBP18.91■□□□□ 0.62
GAPDH-203ENST00000396858 INSRP06213 1382 aa18.9■□□□□ 0.62
GAPDH-203ENST00000396858 PNISRQ8TF01 805 aaKnown RBP18.89■□□□□ 0.61
GAPDH-203ENST00000396858 KIF24Q5T7B8 1368 aa18.89■□□□□ 0.61
GAPDH-203ENST00000396858 KIAA0232Q92628 1395 aa18.89■□□□□ 0.61
GAPDH-203ENST00000396858 ABCC6O95255 1503 aa18.89■□□□□ 0.61
GAPDH-203ENST00000396858 HOXC9P31274 260 aa18.88■□□□□ 0.61
GAPDH-203ENST00000396858 AMPHP49418 695 aa18.88■□□□□ 0.61
GAPDH-203ENST00000396858 HAP1P54257 671 aaPredicted RBP18.88■□□□□ 0.61
GAPDH-203ENST00000396858 ZC3H6P61129 1189 aaKnown RBP18.88■□□□□ 0.61
GAPDH-203ENST00000396858 CPDO75976 1380 aa18.87■□□□□ 0.61
GAPDH-203ENST00000396858 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms