RNA–Protein interactions for RNA: ENST00000395432.6

PCDH15-208, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 6,901 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-208	ENST00000395432	PARP4	Q9UKK3	1724 aa	Known RBP	4.83	□□□□□ -1.64
PCDH15-208	ENST00000395432	CNKSR2	Q8WXI2	1034 aa		4.83	□□□□□ -1.64
PCDH15-208	ENST00000395432	PIK3C2A	O00443	1686 aa		4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	LGR5	O75473	907 aa		4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	ABL1	P00519	1130 aa		4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	DEK	P35659	375 aa	Known RBP	4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	ZMYND15	Q9H091	742 aa		4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	LOC105371045	A0A1W2PR82	267 aa		4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	ERBIN	Q96RT1	1412 aa		4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	RNF40	O75150	1001 aa		4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	GOLGA2	Q08379	1002 aa		4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	UBE2Q2	Q8WVN8	375 aa		4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.82	□□□□□ -1.64
PCDH15-208	ENST00000395432	SHQ1	Q6PI26	577 aa	Known RBP	4.81	□□□□□ -1.64
PCDH15-208	ENST00000395432	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	4.81	□□□□□ -1.64
PCDH15-208	ENST00000395432	FOXD4L3	Q6VB84	417 aa	Predicted RBP	4.81	□□□□□ -1.64
PCDH15-208	ENST00000395432	DUOX1	Q9NRD9	1551 aa		4.81	□□□□□ -1.64
PCDH15-208	ENST00000395432	ANKRD62	A6NC57	917 aa		4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	HMGN5	P82970	282 aa	Known RBP	4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	MAP10	Q9P2G4	905 aa		4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	SRPK2	P78362	688 aa	Known RBP	4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	GPRASP1	Q5JY77	1395 aa		4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	CALR3	Q96L12	384 aa	Known RBP	4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	FAM208A	Q9UK61	1670 aa	Known RBP	4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	DYTN	A2CJ06	578 aa		4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	FYB1	O15117	783 aa		4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	MFAP1	P55081	439 aa	Known RBP	4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	FMN2	Q9NZ56	1722 aa		4.8	□□□□□ -1.64
PCDH15-208	ENST00000395432	ZBBX	A8MT70	800 aa		4.79	□□□□□ -1.64
PCDH15-208	ENST00000395432	GRXCR2	A6NFK2	248 aa		4.79	□□□□□ -1.64
PCDH15-208	ENST00000395432	CLGN	O14967	610 aa		4.79	□□□□□ -1.64
PCDH15-208	ENST00000395432	CLSTN1	O94985	981 aa		4.79	□□□□□ -1.64
PCDH15-208	ENST00000395432	CSB-PGBD3	P0DP91	1061 aa		4.79	□□□□□ -1.64
PCDH15-208	ENST00000395432	BCL9	O00512	1426 aa		4.79	□□□□□ -1.64
PCDH15-208	ENST00000395432	FMN1	Q68DA7	1419 aa		4.79	□□□□□ -1.64
PCDH15-208	ENST00000395432	YY1	P25490	414 aa		4.79	□□□□□ -1.64
PCDH15-208	ENST00000395432	CREBRF	Q8IUR6	639 aa		4.79	□□□□□ -1.64
PCDH15-208	ENST00000395432	FAM160A1	Q05DH4	1040 aa		4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	CNGB1	Q14028	1251 aa	Predicted RBP	4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	IFNLR1	Q8IU57	520 aa	Predicted RBP	4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	MON2	Q7Z3U7	1717 aa		4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	PRPF38A	Q8NAV1	312 aa	Known RBP	4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	DNAJC2	Q99543	621 aa	Known RBP	4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	NWD2	Q9ULI1	1742 aa		4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	ADAMTS13	Q76LX8	1427 aa		4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	PRKG1	Q13976	671 aa		4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	TSNAXIP1	Q2TAA8	658 aa		4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	RBM26	Q5T8P6	1007 aa	Known RBP	4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	POLR3E	Q9NVU0	708 aa		4.78	□□□□□ -1.64
PCDH15-208	ENST00000395432	MAP2	P11137	1827 aa	Known RBP	4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	UHRF1BP1	Q6BDS2	1440 aa		4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	IBSP	P21815	317 aa	Predicted RBP	4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	SLC4A10	Q6U841	1118 aa		4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	CNGA1	P29973	690 aa		4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	GORAB	Q5T7V8	394 aa		4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	STAG3	Q9UJ98	1225 aa		4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	SIPA1L3	O60292	1781 aa	Predicted RBP	4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	C9orf131	Q5VYM1	1079 aa		4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	ERICH6B	Q5W0A0	696 aa		4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	FAM177A1	Q8N128	213 aa	Predicted RBP	4.77	□□□□□ -1.65
PCDH15-208	ENST00000395432	BTN2A1	Q7KYR7	527 aa		4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	PDILT	Q8N807	584 aa		4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	KIF13B	Q9NQT8	1826 aa		4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	SH3BP5	O60239	455 aa		4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	NEFH	P12036	1026 aa		4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	TNS1	Q9HBL0	1735 aa	Known RBP	4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	LRP5	O75197	1615 aa		4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	CPSF1	Q10570	1443 aa	Known RBP	4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	NRXN2	Q9P2S2	1712 aa		4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	PTMA	P06454	111 aa	Known RBP	4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	CLTCL1	P53675	1640 aa		4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	HFM1	A2PYH4	1435 aa		4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	RAB15	P59190	212 aa		4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.76	□□□□□ -1.65
PCDH15-208	ENST00000395432	ERICH4	A6NGS2	130 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	BRPF1	P55201	1214 aa	Predicted RBP	4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	PSME1	Q06323	249 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	FBXW10	Q5XX13	1052 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	GRM1	Q13255	1194 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	CNPY4	Q8N129	248 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	MRS2	Q9HD23	443 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	BRPF3	Q9ULD4	1205 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	DCC	P43146	1447 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	FGD6	Q6ZV73	1430 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	A2ML1	A8K2U0	1454 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	NUTM2E	B1AL46	878 aa	Predicted RBP	4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	SLC4A8	Q2Y0W8	1093 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	NUTM2D	Q5VT03	806 aa	Predicted RBP	4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	VPS37A	Q8NEZ2	397 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	MYCN	P04198	464 aa	Predicted RBP	4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	OSCAR	Q8IYS5	282 aa		4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	4.75	□□□□□ -1.65
PCDH15-208	ENST00000395432	RDX	P35241	583 aa	Known RBP	4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms