RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 DDX17Q92841 729 aaKnown RBP33.1■■■□□ 2.89
CTF1-202ENST00000395019 MON2Q7Z3U7 1717 aa33.09■■■□□ 2.89
CTF1-202ENST00000395019 NSD2O96028 1365 aa33.09■■■□□ 2.89
CTF1-202ENST00000395019 HDGFL2Q7Z4V5 671 aaPredicted RBP33.09■■■□□ 2.89
CTF1-202ENST00000395019 ACEP12821 1306 aa33.08■■■□□ 2.89
CTF1-202ENST00000395019 PIP4K2BP78356 416 aa33.08■■■□□ 2.89
CTF1-202ENST00000395019 HNRNPUQ00839 825 aaKnown RBP eCLIP33.07■■■□□ 2.88
CTF1-202ENST00000395019 NHSL1Q5SYE7 1610 aa33.07■■■□□ 2.88
CTF1-202ENST00000395019 POLR3AO14802 1390 aaPredicted RBP33.06■■■□□ 2.88
CTF1-202ENST00000395019 CPSF1Q10570 1443 aaKnown RBP33.06■■■□□ 2.88
CTF1-202ENST00000395019 FOXO3O43524 673 aa33.04■■■□□ 2.88
CTF1-202ENST00000395019 NRKQ7Z2Y5 1582 aa33.03■■■□□ 2.88
CTF1-202ENST00000395019 NGDNQ8NEJ9 315 aaKnown RBP33.02■■■□□ 2.88
CTF1-202ENST00000395019 SCAF1Q9H7N4 1312 aaKnown RBP33.02■■■□□ 2.88
CTF1-202ENST00000395019 XPCQ01831 940 aaPredicted RBP33.01■■■□□ 2.87
CTF1-202ENST00000395019 MORC1Q86VD1 984 aa33.01■■■□□ 2.87
CTF1-202ENST00000395019 TRPM3Q9HCF6 1732 aaPredicted RBP33■■■□□ 2.87
CTF1-202ENST00000395019 USP6P35125 1406 aa32.97■■■□□ 2.87
CTF1-202ENST00000395019 PXDNQ92626 1479 aa32.97■■■□□ 2.87
CTF1-202ENST00000395019 AHDC1Q5TGY3 1603 aaPredicted RBP32.96■■■□□ 2.87
CTF1-202ENST00000395019 PHLPP1O60346 1717 aa32.95■■■□□ 2.87
CTF1-202ENST00000395019 INSRP06213 1382 aa32.94■■■□□ 2.86
CTF1-202ENST00000395019 SSH2Q76I76 1423 aa32.93■■■□□ 2.86
CTF1-202ENST00000395019 PSME1Q06323 249 aa32.92■■■□□ 2.86
CTF1-202ENST00000395019 NPHP3Q7Z494 1330 aa32.92■■■□□ 2.86
CTF1-202ENST00000395019 FYB1O15117 783 aa32.91■■■□□ 2.86
CTF1-202ENST00000395019 EDC4Q6P2E9 1401 aaKnown RBP32.91■■■□□ 2.86
CTF1-202ENST00000395019 KRT28Q7Z3Y7 464 aa32.91■■■□□ 2.86
CTF1-202ENST00000395019 ANKRD26Q9UPS8 1709 aa32.9■■■□□ 2.86
CTF1-202ENST00000395019 ZNF692Q9BU19 519 aaPredicted RBP32.9■■■□□ 2.86
CTF1-202ENST00000395019 ZBED9Q6R2W3 1325 aa32.9■■■□□ 2.86
CTF1-202ENST00000395019 PIK3C2AO00443 1686 aa32.89■■■□□ 2.86
CTF1-202ENST00000395019 KIF20BQ96Q89 1820 aa32.89■■■□□ 2.86
CTF1-202ENST00000395019 COL16A1Q07092 1604 aaPredicted RBP32.89■■■□□ 2.86
CTF1-202ENST00000395019 ALS2Q96Q42 1657 aa32.88■■■□□ 2.85
CTF1-202ENST00000395019 GGNBP2Q9H3C7 697 aa32.87■■■□□ 2.85
CTF1-202ENST00000395019 SOS2Q07890 1332 aaPredicted RBP32.87■■■□□ 2.85
CTF1-202ENST00000395019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.86■■■□□ 2.85
CTF1-202ENST00000395019 MARF1Q9Y4F3 1742 aaKnown RBP32.85■■■□□ 2.85
CTF1-202ENST00000395019 TTC21BQ7Z4L5 1316 aa32.85■■■□□ 2.85
CTF1-202ENST00000395019 PAK3O75914 559 aaPredicted RBP32.82■■■□□ 2.84
CTF1-202ENST00000395019 TNNT2P45379 298 aaPredicted RBP32.82■■■□□ 2.84
CTF1-202ENST00000395019 BLMP54132 1417 aaPredicted RBP32.81■■■□□ 2.84
CTF1-202ENST00000395019 ZRANB1Q9UGI0 708 aa32.8■■■□□ 2.84
CTF1-202ENST00000395019 WDR43Q15061 677 aaKnown RBP eCLIP32.8■■■□□ 2.84
CTF1-202ENST00000395019 NME9Q86XW9 330 aa32.8■■■□□ 2.84
CTF1-202ENST00000395019 SBNO1A3KN83 1393 aa32.79■■■□□ 2.84
CTF1-202ENST00000395019 TNS3Q68CZ2 1445 aa32.78■■■□□ 2.84
CTF1-202ENST00000395019 SPATA31A3Q5VYP0 1347 aa32.77■■■□□ 2.84
CTF1-202ENST00000395019 MTHFSP49914 203 aa32.77■■■□□ 2.84
CTF1-202ENST00000395019 NUTM2GQ5VZR2 741 aa32.77■■■□□ 2.84
CTF1-202ENST00000395019 ADAMTS8Q9UP79 889 aa32.77■■■□□ 2.84
CTF1-202ENST00000395019 TTC21AQ8NDW8 1320 aa32.74■■■□□ 2.83
CTF1-202ENST00000395019 HSPA1LP34931 641 aa32.74■■■□□ 2.83
CTF1-202ENST00000395019 USP54Q70EL1 1684 aa32.74■■■□□ 2.83
CTF1-202ENST00000395019 CRYBG1Q9Y4K1 1723 aa32.74■■■□□ 2.83
CTF1-202ENST00000395019 LMOD2Q6P5Q4 547 aa32.73■■■□□ 2.83
CTF1-202ENST00000395019 CFAP53Q96M91 514 aa32.73■■■□□ 2.83
CTF1-202ENST00000395019 ABTB2Q8N961 1025 aa32.72■■■□□ 2.83
CTF1-202ENST00000395019 FBXO41Q8TF61 875 aa32.7■■■□□ 2.83
CTF1-202ENST00000395019 ABCA3Q99758 1704 aa32.7■■■□□ 2.83
CTF1-202ENST00000395019 MED1Q15648 1581 aaPredicted RBP32.7■■■□□ 2.83
CTF1-202ENST00000395019 PLEKHG5O94827 1062 aa32.69■■■□□ 2.82
CTF1-202ENST00000395019 OVOS2A0A0J9YW53 1432 aa32.69■■■□□ 2.82
CTF1-202ENST00000395019 OVOS2Q6IE36 1432 aa32.69■■■□□ 2.82
CTF1-202ENST00000395019 PHRF1Q9P1Y6 1649 aaKnown RBP32.68■■■□□ 2.82
CTF1-202ENST00000395019 GTF3C3Q9Y5Q9 886 aa32.67■■■□□ 2.82
CTF1-202ENST00000395019 COL22A1Q8NFW1 1626 aaPredicted RBP32.66■■■□□ 2.82
CTF1-202ENST00000395019 LRRC59Q96AG4 307 aaKnown RBP32.66■■■□□ 2.82
CTF1-202ENST00000395019 SHPRHQ149N8 1683 aa32.66■■■□□ 2.82
CTF1-202ENST00000395019 NLRP6P59044 892 aa32.66■■■□□ 2.82
CTF1-202ENST00000395019 COG3Q96JB2 828 aa32.66■■■□□ 2.82
CTF1-202ENST00000395019 USP31Q70CQ4 1352 aa32.65■■■□□ 2.82
CTF1-202ENST00000395019 PNPLA6Q8IY17 1366 aa32.65■■■□□ 2.82
CTF1-202ENST00000395019 ARHGEF10O15013 1369 aa32.64■■■□□ 2.82
CTF1-202ENST00000395019 AATKQ6ZMQ8 1374 aa32.63■■■□□ 2.81
CTF1-202ENST00000395019 CABLES1Q8TDN4 633 aa32.62■■■□□ 2.81
CTF1-202ENST00000395019 SLIT3O75094 1523 aa32.61■■■□□ 2.81
CTF1-202ENST00000395019 COL3A1P02461 1466 aaPredicted RBP32.6■■■□□ 2.81
CTF1-202ENST00000395019 USP19O94966 1318 aa32.59■■■□□ 2.81
CTF1-202ENST00000395019 FBLN1P23142 703 aa32.59■■■□□ 2.81
CTF1-202ENST00000395019 POLKQ9UBT6 870 aa32.58■■■□□ 2.81
CTF1-202ENST00000395019 SENP3-EIF4A1A0A087X0R7 540 aa32.57■■■□□ 2.8
CTF1-202ENST00000395019 SMG6Q86US8 1419 aaKnown RBP32.57■■■□□ 2.8
CTF1-202ENST00000395019 NFAT5O94916 1531 aa32.56■■■□□ 2.8
CTF1-202ENST00000395019 SOX12O15370 315 aa32.56■■■□□ 2.8
CTF1-202ENST00000395019 MAP2P11137 1827 aaKnown RBP32.56■■■□□ 2.8
CTF1-202ENST00000395019 JCADQ9P266 1359 aa32.54■■■□□ 2.8
CTF1-202ENST00000395019 LTN1O94822 1766 aa32.54■■■□□ 2.8
CTF1-202ENST00000395019 NUDCQ9Y266 331 aa32.52■■■□□ 2.8
CTF1-202ENST00000395019 PDE3BQ13370 1112 aa32.51■■■□□ 2.8
CTF1-202ENST00000395019 CCDC146Q8IYE0 955 aa32.5■■■□□ 2.79
CTF1-202ENST00000395019 SALL2Q9Y467 1007 aaPredicted RBP32.5■■■□□ 2.79
CTF1-202ENST00000395019 GCP02774 474 aa32.49■■■□□ 2.79
CTF1-202ENST00000395019 CDK12Q9NYV4 1490 aaPredicted RBP32.49■■■□□ 2.79
CTF1-202ENST00000395019 DIAPH1O60610 1272 aaKnown RBP32.48■■■□□ 2.79
CTF1-202ENST00000395019 PEAK1Q9H792 1746 aa32.47■■■□□ 2.79
CTF1-202ENST00000395019 EMILIN1Q9Y6C2 1016 aa32.47■■■□□ 2.79
CTF1-202ENST00000395019 NGEFQ8N5V2 710 aa32.46■■■□□ 2.79
CTF1-202ENST00000395019 U2AF1L5P0DN76 240 aaPredicted RBP32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms