RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 TSR2Q969E8 191 aaKnown RBP18.59■□□□□ 0.57
SPOCK1-202ENST00000394945 MCM5P33992 734 aa18.59■□□□□ 0.57
SPOCK1-202ENST00000394945 SLFN5Q08AF3 891 aa18.59■□□□□ 0.57
SPOCK1-202ENST00000394945 PPP4R3BQ5MIZ7 849 aa18.59■□□□□ 0.57
SPOCK1-202ENST00000394945 AXDND1Q5T1B0 1012 aaPredicted RBP18.59■□□□□ 0.57
SPOCK1-202ENST00000394945 ATF7IPQ6VMQ6 1270 aa18.59■□□□□ 0.57
SPOCK1-202ENST00000394945 CALCOCO1Q9P1Z2 691 aa18.59■□□□□ 0.57
SPOCK1-202ENST00000394945 TTLL5Q6EMB2 1281 aa18.59■□□□□ 0.57
SPOCK1-202ENST00000394945 LTV1Q96GA3 475 aaPredicted RBP18.59■□□□□ 0.57
SPOCK1-202ENST00000394945 COG3Q96JB2 828 aa18.58■□□□□ 0.57
SPOCK1-202ENST00000394945 SSFA2P28290 1259 aa18.58■□□□□ 0.56
SPOCK1-202ENST00000394945 HSP90AB4PQ58FF6 505 aa18.58■□□□□ 0.56
SPOCK1-202ENST00000394945 FILIP1Q7Z7B0 1213 aa18.58■□□□□ 0.56
SPOCK1-202ENST00000394945 PSMA5P28066 241 aa18.57■□□□□ 0.56
SPOCK1-202ENST00000394945 EIF2S2P20042 333 aaKnown RBP18.57■□□□□ 0.56
SPOCK1-202ENST00000394945 KRT85P78386 507 aa18.57■□□□□ 0.56
SPOCK1-202ENST00000394945 TRERF1Q96PN7 1200 aa18.57■□□□□ 0.56
SPOCK1-202ENST00000394945 AEBP1Q8IUX7 1158 aa18.56■□□□□ 0.56
SPOCK1-202ENST00000394945 UBXN4Q92575 508 aa18.56■□□□□ 0.56
SPOCK1-202ENST00000394945 HMOX1P09601 288 aa18.56■□□□□ 0.56
SPOCK1-202ENST00000394945 SPDYE4A6NLX3 237 aa18.55■□□□□ 0.56
SPOCK1-202ENST00000394945 G3BP1Q13283 466 aaKnown RBP eCLIP18.55■□□□□ 0.56
SPOCK1-202ENST00000394945 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
SPOCK1-202ENST00000394945 HSP90AB3PQ58FF7 597 aa18.55■□□□□ 0.56
SPOCK1-202ENST00000394945 CAGE1Q8TC20 777 aa18.55■□□□□ 0.56
SPOCK1-202ENST00000394945 CCDC191Q8NCU4 936 aa18.55■□□□□ 0.56
SPOCK1-202ENST00000394945 BBXQ8WY36 941 aaPredicted RBP18.55■□□□□ 0.56
SPOCK1-202ENST00000394945 PRXQ9BXM0 1461 aa18.55■□□□□ 0.56
SPOCK1-202ENST00000394945 CNTROBQ8N137 903 aa18.55■□□□□ 0.56
SPOCK1-202ENST00000394945 DHX8Q14562 1220 aaKnown RBP18.54■□□□□ 0.56
SPOCK1-202ENST00000394945 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
SPOCK1-202ENST00000394945 CEBPZQ03701 1054 aaKnown RBP18.54■□□□□ 0.56
SPOCK1-202ENST00000394945 LRRFIP1Q32MZ4 808 aaKnown RBP18.54■□□□□ 0.56
SPOCK1-202ENST00000394945 WDR63Q8IWG1 891 aa18.54■□□□□ 0.56
SPOCK1-202ENST00000394945 EIF3JO75822 258 aaKnown RBP18.54■□□□□ 0.56
SPOCK1-202ENST00000394945 FAM177A1Q8N128 213 aaPredicted RBP18.54■□□□□ 0.56
SPOCK1-202ENST00000394945 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
SPOCK1-202ENST00000394945 NUP62CLQ9H1M0 184 aa18.53■□□□□ 0.56
SPOCK1-202ENST00000394945 USP25Q9UHP3 1055 aa18.53■□□□□ 0.56
SPOCK1-202ENST00000394945 TMCO3Q6UWJ1 677 aa18.53■□□□□ 0.56
SPOCK1-202ENST00000394945 MINK1Q8N4C8 1332 aaPredicted RBP18.53■□□□□ 0.56
SPOCK1-202ENST00000394945 ERLIN1O75477 346 aa18.53■□□□□ 0.56
SPOCK1-202ENST00000394945 CT47B1P0C2W7 299 aaPredicted RBP18.53■□□□□ 0.56
SPOCK1-202ENST00000394945 USP8P40818 1118 aa18.53■□□□□ 0.56
SPOCK1-202ENST00000394945 TRDNQ13061 729 aa18.52■□□□□ 0.56
SPOCK1-202ENST00000394945 PTPN14Q15678 1187 aa18.52■□□□□ 0.56
SPOCK1-202ENST00000394945 DCTN1Q14203 1278 aa18.52■□□□□ 0.55
SPOCK1-202ENST00000394945 NUTM2FA1L443 756 aa18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 NAP1L1P55209 391 aaKnown RBP18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 NGDNQ8NEJ9 315 aaKnown RBP18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 PRIMPOLQ96LW4 560 aa18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 TBC1D32Q96NH3 1257 aa18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 MARCH6O60337 910 aa18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 UBTFL1P0CB47 393 aaPredicted RBP18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 TOP2BQ02880 1626 aa18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 SURF6O75683 361 aaKnown RBP18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 KIAA0754O94854 1291 aa18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 KLHL40Q2TBA0 621 aa18.51■□□□□ 0.55
SPOCK1-202ENST00000394945 SERPINC1P01008 464 aa18.5■□□□□ 0.55
SPOCK1-202ENST00000394945 LARP1BQ659C4 914 aaKnown RBP18.5■□□□□ 0.55
SPOCK1-202ENST00000394945 CCDC47Q96A33 483 aaKnown RBP18.5■□□□□ 0.55
SPOCK1-202ENST00000394945 RRP12Q5JTH9 1297 aaKnown RBP18.5■□□□□ 0.55
SPOCK1-202ENST00000394945 STAC3Q96MF2 364 aa18.5■□□□□ 0.55
SPOCK1-202ENST00000394945 GNAI3P08754 354 aa18.5■□□□□ 0.55
SPOCK1-202ENST00000394945 NEXNQ0ZGT2 675 aa18.5■□□□□ 0.55
SPOCK1-202ENST00000394945 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
SPOCK1-202ENST00000394945 FAM69CQ0P6D2 419 aa18.49■□□□□ 0.55
SPOCK1-202ENST00000394945 TEFQ10587 303 aa18.49■□□□□ 0.55
SPOCK1-202ENST00000394945 TSPYL4Q9UJ04 414 aa18.49■□□□□ 0.55
SPOCK1-202ENST00000394945 SAFBQ15424 915 aaKnown RBP eCLIP18.49■□□□□ 0.55
SPOCK1-202ENST00000394945 CLASRPQ8N2M8 674 aaKnown RBP18.49■□□□□ 0.55
SPOCK1-202ENST00000394945 MAP3K11Q16584 847 aa18.49■□□□□ 0.55
SPOCK1-202ENST00000394945 TWISTNBQ3B726 338 aaPredicted RBP18.49■□□□□ 0.55
SPOCK1-202ENST00000394945 RRAGDQ9NQL2 400 aaPredicted RBP18.49■□□□□ 0.55
SPOCK1-202ENST00000394945 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
SPOCK1-202ENST00000394945 KIF2AO00139 706 aaPredicted RBP18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 BAG4O95429 457 aaKnown RBP18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 AFAP1Q8N556 730 aa18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 KIF18AQ8NI77 898 aa18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 CYP46A1Q9Y6A2 500 aa18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 HFM1A2PYH4 1435 aa18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 CASKIN1Q8WXD9 1431 aa18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 CSB-PGBD3P0DP91 1061 aa18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 TNNT1P13805 278 aa18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 NCOA2Q15596 1464 aa18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 STK38Q15208 465 aa18.48■□□□□ 0.55
SPOCK1-202ENST00000394945 ZNF396Q96N95 335 aaPredicted RBP18.47■□□□□ 0.55
SPOCK1-202ENST00000394945 PRG4Q92954 1404 aaPredicted RBP18.47■□□□□ 0.55
SPOCK1-202ENST00000394945 WWC1Q8IX03 1113 aa18.47■□□□□ 0.55
SPOCK1-202ENST00000394945 C16orf45Q96MC5 204 aaPredicted RBP18.47■□□□□ 0.55
SPOCK1-202ENST00000394945 CCDC183Q5T5S1 534 aa18.47■□□□□ 0.55
SPOCK1-202ENST00000394945 ERICH3Q5RHP9 1530 aa18.47■□□□□ 0.55
SPOCK1-202ENST00000394945 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
SPOCK1-202ENST00000394945 CEP57L1Q8IYX8 460 aa18.46■□□□□ 0.55
SPOCK1-202ENST00000394945 SPATA32Q96LK8 384 aa18.46■□□□□ 0.55
SPOCK1-202ENST00000394945 CCDC102AQ96A19 550 aa18.46■□□□□ 0.55
SPOCK1-202ENST00000394945 GTF2F1P35269 517 aaKnown RBP eCLIP18.46■□□□□ 0.55
SPOCK1-202ENST00000394945 NFXL1Q6ZNB6 911 aa18.46■□□□□ 0.55
SPOCK1-202ENST00000394945 FSD1Q9BTV5 496 aa18.46■□□□□ 0.55
SPOCK1-202ENST00000394945 SMARCE1Q969G3 411 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms