RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 IPO8O15397 1037 aaKnown RBP20.46■□□□□ 0.87
EFEMP1-202ENST00000394555 KIAA1211Q6ZU35 1233 aa20.46■□□□□ 0.87
EFEMP1-202ENST00000394555 ANP32BQ92688 251 aaKnown RBP20.46■□□□□ 0.87
EFEMP1-202ENST00000394555 K7ELQ4 463 aaPredicted RBP20.45■□□□□ 0.87
EFEMP1-202ENST00000394555 NCLP19338 710 aaKnown RBP20.45■□□□□ 0.87
EFEMP1-202ENST00000394555 CABP2Q9NPB3 220 aa20.45■□□□□ 0.87
EFEMP1-202ENST00000394555 SBNO2Q9Y2G9 1366 aa20.45■□□□□ 0.86
EFEMP1-202ENST00000394555 GGNBP2Q9H3C7 697 aa20.45■□□□□ 0.86
EFEMP1-202ENST00000394555 GOLGA6L22H0YM25 854 aa20.45■□□□□ 0.86
EFEMP1-202ENST00000394555 GAS2L2Q8NHY3 880 aa20.45■□□□□ 0.86
EFEMP1-202ENST00000394555 MYOM2P54296 1465 aa20.44■□□□□ 0.86
EFEMP1-202ENST00000394555 TBC1D9Q6ZT07 1266 aa20.43■□□□□ 0.86
EFEMP1-202ENST00000394555 TET3O43151 1660 aa20.43■□□□□ 0.86
EFEMP1-202ENST00000394555 BMP2KLQ5H9B9 411 aa20.43■□□□□ 0.86
EFEMP1-202ENST00000394555 CCDC173Q0VFZ6 552 aa20.43■□□□□ 0.86
EFEMP1-202ENST00000394555 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
EFEMP1-202ENST00000394555 CD109Q6YHK3 1445 aa20.42■□□□□ 0.86
EFEMP1-202ENST00000394555 KIF16BQ96L93 1317 aa20.42■□□□□ 0.86
EFEMP1-202ENST00000394555 SHROOM2Q13796 1616 aa20.41■□□□□ 0.86
EFEMP1-202ENST00000394555 TPM2P07951 284 aa20.41■□□□□ 0.86
EFEMP1-202ENST00000394555 PTMSP20962 102 aa20.4■□□□□ 0.86
EFEMP1-202ENST00000394555 MSNP26038 577 aaKnown RBP20.4■□□□□ 0.86
EFEMP1-202ENST00000394555 ZFYVE16Q7Z3T8 1539 aa20.4■□□□□ 0.86
EFEMP1-202ENST00000394555 ERCC6L2Q5T890 1561 aa20.4■□□□□ 0.86
EFEMP1-202ENST00000394555 C14orf93Q9H972 538 aaKnown RBP20.4■□□□□ 0.86
EFEMP1-202ENST00000394555 ZSCAN30Q86W11 494 aa20.39■□□□□ 0.85
EFEMP1-202ENST00000394555 BAG4O95429 457 aaKnown RBP20.39■□□□□ 0.85
EFEMP1-202ENST00000394555 MCTP1Q6DN14 999 aa20.39■□□□□ 0.85
EFEMP1-202ENST00000394555 RBM10P98175 930 aaKnown RBP20.38■□□□□ 0.85
EFEMP1-202ENST00000394555 EVC2Q86UK5 1308 aa20.38■□□□□ 0.85
EFEMP1-202ENST00000394555 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
EFEMP1-202ENST00000394555 NCBP3Q53F19 620 aaKnown RBP20.37■□□□□ 0.85
EFEMP1-202ENST00000394555 CAVIN1Q6NZI2 390 aaKnown RBP20.37■□□□□ 0.85
EFEMP1-202ENST00000394555 KIF1BO60333 1816 aa20.37■□□□□ 0.85
EFEMP1-202ENST00000394555 KLHL40Q2TBA0 621 aa20.36■□□□□ 0.85
EFEMP1-202ENST00000394555 PPP1R9BQ96SB3 815 aa20.36■□□□□ 0.85
EFEMP1-202ENST00000394555 ABCC11Q96J66 1382 aa20.36■□□□□ 0.85
EFEMP1-202ENST00000394555 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
EFEMP1-202ENST00000394555 AK9Q5TCS8 1911 aa20.35■□□□□ 0.85
EFEMP1-202ENST00000394555 ANKRD36BQ8N2N9 1353 aa20.35■□□□□ 0.85
EFEMP1-202ENST00000394555 CFAP65Q6ZU64 1925 aaKnown RBP20.34■□□□□ 0.85
EFEMP1-202ENST00000394555 ZBTB7BO15156 539 aaPredicted RBP20.34■□□□□ 0.85
EFEMP1-202ENST00000394555 PDCL3Q9H2J4 239 aa20.34■□□□□ 0.85
EFEMP1-202ENST00000394555 STK26Q9P289 416 aa20.34■□□□□ 0.85
EFEMP1-202ENST00000394555 QRICH2Q9H0J4 1663 aa20.34■□□□□ 0.85
EFEMP1-202ENST00000394555 PPIP5K1Q6PFW1 1433 aa20.34■□□□□ 0.85
EFEMP1-202ENST00000394555 CALD1Q05682 793 aaKnown RBP20.34■□□□□ 0.85
EFEMP1-202ENST00000394555 GCC1Q96CN9 775 aa20.34■□□□□ 0.85
EFEMP1-202ENST00000394555 THUMPD2Q9BTF0 503 aaKnown RBP20.33■□□□□ 0.85
EFEMP1-202ENST00000394555 DEPDC5O75140 1603 aa20.33■□□□□ 0.85
EFEMP1-202ENST00000394555 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.85
EFEMP1-202ENST00000394555 MROH2AA6NES4 1674 aa20.33■□□□□ 0.85
EFEMP1-202ENST00000394555 R3HCC1Q9Y3T6 440 aaKnown RBP20.33■□□□□ 0.84
EFEMP1-202ENST00000394555 ADGRB2O60241 1585 aa20.33■□□□□ 0.84
EFEMP1-202ENST00000394555 OFD1O75665 1012 aa20.32■□□□□ 0.84
EFEMP1-202ENST00000394555 IL16Q14005 1332 aa20.32■□□□□ 0.84
EFEMP1-202ENST00000394555 ADGRL1O94910 1474 aa20.32■□□□□ 0.84
EFEMP1-202ENST00000394555 PKP1Q13835 747 aa20.32■□□□□ 0.84
EFEMP1-202ENST00000394555 ALDH1L2Q3SY69 923 aa20.32■□□□□ 0.84
EFEMP1-202ENST00000394555 ATP7AQ04656 1500 aa20.31■□□□□ 0.84
EFEMP1-202ENST00000394555 DIAPH1O60610 1272 aaKnown RBP20.31■□□□□ 0.84
EFEMP1-202ENST00000394555 CDC45O75419 566 aa20.31■□□□□ 0.84
EFEMP1-202ENST00000394555 GGT6Q6P531 493 aa20.31■□□□□ 0.84
EFEMP1-202ENST00000394555 SIRT2Q8IXJ6 389 aa20.31■□□□□ 0.84
EFEMP1-202ENST00000394555 FAM13BQ9NYF5 915 aa20.31■□□□□ 0.84
EFEMP1-202ENST00000394555 NSD2O96028 1365 aa20.3■□□□□ 0.84
EFEMP1-202ENST00000394555 NRXN1Q9ULB1 1477 aa20.3■□□□□ 0.84
EFEMP1-202ENST00000394555 ZSCAN23Q3MJ62 389 aa20.3■□□□□ 0.84
EFEMP1-202ENST00000394555 FBLN1P23142 703 aa20.29■□□□□ 0.84
EFEMP1-202ENST00000394555 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
EFEMP1-202ENST00000394555 TSPYL6Q8N831 410 aa20.29■□□□□ 0.84
EFEMP1-202ENST00000394555 ARID3AQ99856 593 aa20.29■□□□□ 0.84
EFEMP1-202ENST00000394555 RBSNQ9H1K0 784 aa20.29■□□□□ 0.84
EFEMP1-202ENST00000394555 VWDEQ8N2E2 1590 aa20.28■□□□□ 0.84
EFEMP1-202ENST00000394555 A0A1W2PP64 1363 aa20.28■□□□□ 0.84
EFEMP1-202ENST00000394555 ZCCHC11Q5TAX3 1644 aaKnown RBP20.28■□□□□ 0.84
EFEMP1-202ENST00000394555 XPCQ01831 940 aaPredicted RBP20.28■□□□□ 0.84
EFEMP1-202ENST00000394555 PRPF40AO75400 957 aaKnown RBP20.28■□□□□ 0.84
EFEMP1-202ENST00000394555 RBM27Q9P2N5 1060 aaKnown RBP20.28■□□□□ 0.84
EFEMP1-202ENST00000394555 FYB1O15117 783 aa20.27■□□□□ 0.84
EFEMP1-202ENST00000394555 PRKAR2BP31323 418 aa20.27■□□□□ 0.84
EFEMP1-202ENST00000394555 GSPT1P15170 499 aaKnown RBP20.27■□□□□ 0.84
EFEMP1-202ENST00000394555 CHAMP1Q96JM3 812 aa20.27■□□□□ 0.84
EFEMP1-202ENST00000394555 PRIM1P49642 420 aaKnown RBP20.27■□□□□ 0.83
EFEMP1-202ENST00000394555 FOXD4L5Q5VV16 416 aaPredicted RBP20.27■□□□□ 0.83
EFEMP1-202ENST00000394555 FOXD4L4Q8WXT5 416 aaPredicted RBP20.27■□□□□ 0.83
EFEMP1-202ENST00000394555 CFAP74Q9C0B2 1584 aa20.26■□□□□ 0.83
EFEMP1-202ENST00000394555 IFT172Q9UG01 1749 aa20.26■□□□□ 0.83
EFEMP1-202ENST00000394555 APBB1O00213 710 aa20.26■□□□□ 0.83
EFEMP1-202ENST00000394555 HMOX1P09601 288 aa20.26■□□□□ 0.83
EFEMP1-202ENST00000394555 C16orf71Q8IYS4 520 aaPredicted RBP20.26■□□□□ 0.83
EFEMP1-202ENST00000394555 LMBRD1Q9NUN5 540 aa20.26■□□□□ 0.83
EFEMP1-202ENST00000394555 NEURL4Q96JN8 1562 aa20.25■□□□□ 0.83
EFEMP1-202ENST00000394555 NUCB2P80303 420 aa20.25■□□□□ 0.83
EFEMP1-202ENST00000394555 RABEP1Q15276 862 aa20.25■□□□□ 0.83
EFEMP1-202ENST00000394555 CLEC17AQ6ZS10 378 aa20.25■□□□□ 0.83
EFEMP1-202ENST00000394555 SETBP1Q9Y6X0 1596 aa20.25■□□□□ 0.83
EFEMP1-202ENST00000394555 FANCAO15360 1455 aa20.25■□□□□ 0.83
EFEMP1-202ENST00000394555 ATAD2Q6PL18 1390 aa20.25■□□□□ 0.83
EFEMP1-202ENST00000394555 ZNF445P59923 1031 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms