RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 WAPLQ7Z5K2 1190 aa21.4■■□□□ 1.02
PRDM5-202ENST00000394435 PCDHB15Q9Y5E8 787 aa21.4■■□□□ 1.02
PRDM5-202ENST00000394435 TRIM35Q9UPQ4 493 aa21.4■■□□□ 1.02
PRDM5-202ENST00000394435 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
PRDM5-202ENST00000394435 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
PRDM5-202ENST00000394435 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
PRDM5-202ENST00000394435 A2ML1A8K2U0 1454 aa21.39■■□□□ 1.02
PRDM5-202ENST00000394435 AGLP35573 1532 aa21.38■■□□□ 1.01
PRDM5-202ENST00000394435 REREQ9P2R6 1566 aa21.38■■□□□ 1.01
PRDM5-202ENST00000394435 DIAPH1O60610 1272 aaKnown RBP21.38■■□□□ 1.01
PRDM5-202ENST00000394435 EXOSC9Q06265 439 aaKnown RBP21.38■■□□□ 1.01
PRDM5-202ENST00000394435 PMFBP1Q8TBY8 1022 aa21.38■■□□□ 1.01
PRDM5-202ENST00000394435 KIF20BQ96Q89 1820 aa21.38■■□□□ 1.01
PRDM5-202ENST00000394435 NEFMP07197 916 aa21.37■■□□□ 1.01
PRDM5-202ENST00000394435 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
PRDM5-202ENST00000394435 RIMS2Q9UQ26 1411 aa21.37■■□□□ 1.01
PRDM5-202ENST00000394435 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.37■■□□□ 1.01
PRDM5-202ENST00000394435 AAMPQ13685 434 aa21.36■■□□□ 1.01
PRDM5-202ENST00000394435 PPM1GO15355 546 aaPredicted RBP21.36■■□□□ 1.01
PRDM5-202ENST00000394435 ZKSCAN2Q63HK3 967 aa21.35■■□□□ 1.01
PRDM5-202ENST00000394435 SPATA31D1Q6ZQQ2 1576 aa21.35■■□□□ 1.01
PRDM5-202ENST00000394435 RIPK4P57078 832 aa21.35■■□□□ 1.01
PRDM5-202ENST00000394435 FBLN1P23142 703 aa21.34■■□□□ 1.01
PRDM5-202ENST00000394435 DAXXQ9UER7 740 aaPredicted RBP21.34■■□□□ 1.01
PRDM5-202ENST00000394435 VIRMAQ69YN4 1812 aaKnown RBP21.34■■□□□ 1.01
PRDM5-202ENST00000394435 PNPLA6Q8IY17 1366 aa21.34■■□□□ 1.01
PRDM5-202ENST00000394435 MVPQ14764 893 aaKnown RBP21.34■■□□□ 1.01
PRDM5-202ENST00000394435 DLC1Q96QB1 1528 aa21.34■■□□□ 1.01
PRDM5-202ENST00000394435 CT47B1P0C2W7 299 aaPredicted RBP21.33■■□□□ 1.01
PRDM5-202ENST00000394435 SMC4Q9NTJ3 1288 aa21.33■■□□□ 1.01
PRDM5-202ENST00000394435 SETD1AO15047 1707 aaKnown RBP21.33■■□□□ 1.01
PRDM5-202ENST00000394435 FTSJ3Q8IY81 847 aaKnown RBP21.32■■□□□ 1
PRDM5-202ENST00000394435 DZIP1LQ8IYY4 767 aaKnown RBP21.32■■□□□ 1
PRDM5-202ENST00000394435 SSH1Q8WYL5 1049 aa21.31■■□□□ 1
PRDM5-202ENST00000394435 RWDD1Q9H446 243 aaPredicted RBP21.31■■□□□ 1
PRDM5-202ENST00000394435 PDZRN3Q9UPQ7 1066 aa21.31■■□□□ 1
PRDM5-202ENST00000394435 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
PRDM5-202ENST00000394435 POLKQ9UBT6 870 aa21.3■■□□□ 1
PRDM5-202ENST00000394435 IL16Q14005 1332 aa21.3■■□□□ 1
PRDM5-202ENST00000394435 SEC24BO95487 1268 aa21.29■■□□□ 1
PRDM5-202ENST00000394435 ATP7BP35670 1465 aa21.29■■□□□ 1
PRDM5-202ENST00000394435 USP35Q9P2H5 1018 aa21.29■■□□□ 1
PRDM5-202ENST00000394435 USP19O94966 1318 aa21.28■■□□□ 1
PRDM5-202ENST00000394435 TRIM27P14373 513 aa21.28■■□□□ 1
PRDM5-202ENST00000394435 LRRC7Q96NW7 1537 aa21.27■■□□□ 1
PRDM5-202ENST00000394435 FCHSD2O94868 740 aa21.27■■□□□ 1
PRDM5-202ENST00000394435 PRKAR2BP31323 418 aa21.27■□□□□ 0.99
PRDM5-202ENST00000394435 METP08581 1390 aa21.26■□□□□ 0.99
PRDM5-202ENST00000394435 NRXN3Q9Y4C0 1643 aa21.26■□□□□ 0.99
PRDM5-202ENST00000394435 NOB1Q9ULX3 412 aaKnown RBP21.26■□□□□ 0.99
PRDM5-202ENST00000394435 CDC42BPGQ6DT37 1551 aa21.26■□□□□ 0.99
PRDM5-202ENST00000394435 WASLO00401 505 aaPredicted RBP21.26■□□□□ 0.99
PRDM5-202ENST00000394435 TXNDC2Q86VQ3 553 aa21.26■□□□□ 0.99
PRDM5-202ENST00000394435 RSPH6AQ9H0K4 717 aa21.26■□□□□ 0.99
PRDM5-202ENST00000394435 MAP2P11137 1827 aaKnown RBP21.25■□□□□ 0.99
PRDM5-202ENST00000394435 ATF7IPQ6VMQ6 1270 aa21.24■□□□□ 0.99
PRDM5-202ENST00000394435 PPIP5K1Q6PFW1 1433 aa21.24■□□□□ 0.99
PRDM5-202ENST00000394435 ITPRIPQ8IWB1 547 aa21.24■□□□□ 0.99
PRDM5-202ENST00000394435 FAM135BQ49AJ0 1406 aa21.23■□□□□ 0.99
PRDM5-202ENST00000394435 HMOX1P09601 288 aa21.23■□□□□ 0.99
PRDM5-202ENST00000394435 NME9Q86XW9 330 aa21.23■□□□□ 0.99
PRDM5-202ENST00000394435 ZRANB1Q9UGI0 708 aa21.23■□□□□ 0.99
PRDM5-202ENST00000394435 EMILIN1Q9Y6C2 1016 aa21.23■□□□□ 0.99
PRDM5-202ENST00000394435 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.22■□□□□ 0.99
PRDM5-202ENST00000394435 CPSF1Q10570 1443 aaKnown RBP21.22■□□□□ 0.99
PRDM5-202ENST00000394435 ESF1Q9H501 851 aaKnown RBP21.22■□□□□ 0.99
PRDM5-202ENST00000394435 NCKAP5LQ9HCH0 1330 aa21.22■□□□□ 0.99
PRDM5-202ENST00000394435 ZMYM3Q14202 1370 aa21.21■□□□□ 0.99
PRDM5-202ENST00000394435 PHACTR3Q96KR7 559 aa21.21■□□□□ 0.99
PRDM5-202ENST00000394435 EDC4Q6P2E9 1401 aaKnown RBP21.21■□□□□ 0.99
PRDM5-202ENST00000394435 NFKBIBQ15653 356 aa21.21■□□□□ 0.99
PRDM5-202ENST00000394435 DDX19BQ9UMR2 479 aa21.21■□□□□ 0.99
PRDM5-202ENST00000394435 TMEM57Q8N5G2 664 aa21.2■□□□□ 0.98
PRDM5-202ENST00000394435 NUDT16Q96DE0 195 aaKnown RBP21.2■□□□□ 0.98
PRDM5-202ENST00000394435 THUMPD2Q9BTF0 503 aaKnown RBP21.18■□□□□ 0.98
PRDM5-202ENST00000394435 NFE2L2Q16236 605 aa21.18■□□□□ 0.98
PRDM5-202ENST00000394435 IL13P35225 146 aa21.17■□□□□ 0.98
PRDM5-202ENST00000394435 KIF16BQ96L93 1317 aa21.17■□□□□ 0.98
PRDM5-202ENST00000394435 IPO8O15397 1037 aaKnown RBP21.16■□□□□ 0.98
PRDM5-202ENST00000394435 HDAC1Q13547 482 aaPredicted RBP21.16■□□□□ 0.98
PRDM5-202ENST00000394435 CPS1P31327 1500 aa21.16■□□□□ 0.98
PRDM5-202ENST00000394435 ALDH1L2Q3SY69 923 aa21.16■□□□□ 0.98
PRDM5-202ENST00000394435 COG3Q96JB2 828 aa21.15■□□□□ 0.98
PRDM5-202ENST00000394435 CCDC61Q9Y6R9 512 aa21.15■□□□□ 0.98
PRDM5-202ENST00000394435 RRS1Q15050 365 aaKnown RBP21.14■□□□□ 0.98
PRDM5-202ENST00000394435 KNDC1Q76NI1 1749 aa21.14■□□□□ 0.97
PRDM5-202ENST00000394435 CDK12Q9NYV4 1490 aaPredicted RBP21.14■□□□□ 0.97
PRDM5-202ENST00000394435 ZBTB40Q9NUA8 1239 aa21.14■□□□□ 0.97
PRDM5-202ENST00000394435 HDGFP51858 240 aaKnown RBP21.13■□□□□ 0.97
PRDM5-202ENST00000394435 MON2Q7Z3U7 1717 aa21.12■□□□□ 0.97
PRDM5-202ENST00000394435 AATKQ6ZMQ8 1374 aa21.12■□□□□ 0.97
PRDM5-202ENST00000394435 TNRQ92752 1358 aa21.12■□□□□ 0.97
PRDM5-202ENST00000394435 KIF13AQ9H1H9 1805 aa21.12■□□□□ 0.97
PRDM5-202ENST00000394435 SIRT1Q96EB6 747 aa21.12■□□□□ 0.97
PRDM5-202ENST00000394435 UPF2Q9HAU5 1272 aaKnown RBP21.12■□□□□ 0.97
PRDM5-202ENST00000394435 TECPR2O15040 1411 aa21.12■□□□□ 0.97
PRDM5-202ENST00000394435 PRR36Q9H6K5 1346 aa21.11■□□□□ 0.97
PRDM5-202ENST00000394435 TSPYL6Q8N831 410 aa21.11■□□□□ 0.97
PRDM5-202ENST00000394435 VAMP4O75379 141 aa21.1■□□□□ 0.97
PRDM5-202ENST00000394435 TBC1D32Q96NH3 1257 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms