RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 PLEKHF1Q96S99 279 aa25.15■■□□□ 1.62
RCCD1-201ENST00000394258 PCDHB15Q9Y5E8 787 aa25.13■■□□□ 1.61
RCCD1-201ENST00000394258 DIAPH1O60610 1272 aaKnown RBP25.12■■□□□ 1.61
RCCD1-201ENST00000394258 EXOSC9Q06265 439 aaKnown RBP25.12■■□□□ 1.61
RCCD1-201ENST00000394258 TRIM35Q9UPQ4 493 aa25.12■■□□□ 1.61
RCCD1-201ENST00000394258 DIP2BQ9P265 1576 aa25.11■■□□□ 1.61
RCCD1-201ENST00000394258 RIPK4P57078 832 aa25.1■■□□□ 1.61
RCCD1-201ENST00000394258 RIMBP3CA6NJZ7 1639 aa25.1■■□□□ 1.61
RCCD1-201ENST00000394258 RIMBP3BA6NNM3 1639 aa25.1■■□□□ 1.61
RCCD1-201ENST00000394258 RIMBP3Q9UFD9 1639 aa25.1■■□□□ 1.61
RCCD1-201ENST00000394258 CLTCQ00610 1675 aaKnown RBP25.09■■□□□ 1.61
RCCD1-201ENST00000394258 ARHGEF40Q8TER5 1519 aa25.09■■□□□ 1.61
RCCD1-201ENST00000394258 NLRP1Q9C000 1473 aa25.08■■□□□ 1.61
RCCD1-201ENST00000394258 RIMS2Q9UQ26 1411 aa25.08■■□□□ 1.61
RCCD1-201ENST00000394258 A2ML1A8K2U0 1454 aa25.08■■□□□ 1.61
RCCD1-201ENST00000394258 SMC4Q9NTJ3 1288 aa25.07■■□□□ 1.6
RCCD1-201ENST00000394258 SEC24BO95487 1268 aa25.07■■□□□ 1.6
RCCD1-201ENST00000394258 TXNDC2Q86VQ3 553 aa25.07■■□□□ 1.6
RCCD1-201ENST00000394258 COL3A1P02461 1466 aaPredicted RBP25.06■■□□□ 1.6
RCCD1-201ENST00000394258 FTSJ3Q8IY81 847 aaKnown RBP25.06■■□□□ 1.6
RCCD1-201ENST00000394258 ESF1Q9H501 851 aaKnown RBP25.06■■□□□ 1.6
RCCD1-201ENST00000394258 DAXXQ9UER7 740 aaPredicted RBP25.05■■□□□ 1.6
RCCD1-201ENST00000394258 ZKSCAN2Q63HK3 967 aa25.05■■□□□ 1.6
RCCD1-201ENST00000394258 NCKAP5LQ9HCH0 1330 aa25.05■■□□□ 1.6
RCCD1-201ENST00000394258 PPP6R1Q9UPN7 881 aa25.04■■□□□ 1.6
RCCD1-201ENST00000394258 ADGRB2O60241 1585 aa25.03■■□□□ 1.6
RCCD1-201ENST00000394258 POLKQ9UBT6 870 aa25.03■■□□□ 1.6
RCCD1-201ENST00000394258 ZRANB1Q9UGI0 708 aa25.03■■□□□ 1.6
RCCD1-201ENST00000394258 PMFBP1Q8TBY8 1022 aa25.03■■□□□ 1.6
RCCD1-201ENST00000394258 SSH1Q8WYL5 1049 aa25.03■■□□□ 1.6
RCCD1-201ENST00000394258 HMOX1P09601 288 aa25.02■■□□□ 1.6
RCCD1-201ENST00000394258 DZIP1LQ8IYY4 767 aaKnown RBP25.02■■□□□ 1.6
RCCD1-201ENST00000394258 PRKAR2BP31323 418 aa25.01■■□□□ 1.59
RCCD1-201ENST00000394258 MVPQ14764 893 aaKnown RBP25.01■■□□□ 1.59
RCCD1-201ENST00000394258 NCBP3Q53F19 620 aaKnown RBP25.01■■□□□ 1.59
RCCD1-201ENST00000394258 METP08581 1390 aa25.01■■□□□ 1.59
RCCD1-201ENST00000394258 NME9Q86XW9 330 aa25■■□□□ 1.59
RCCD1-201ENST00000394258 USP19O94966 1318 aa25■■□□□ 1.59
RCCD1-201ENST00000394258 EMILIN1Q9Y6C2 1016 aa25■■□□□ 1.59
RCCD1-201ENST00000394258 PDZRN3Q9UPQ7 1066 aa24.99■■□□□ 1.59
RCCD1-201ENST00000394258 MED14O60244 1454 aa24.99■■□□□ 1.59
RCCD1-201ENST00000394258 TRIM27P14373 513 aa24.99■■□□□ 1.59
RCCD1-201ENST00000394258 NFKBIBQ15653 356 aa24.99■■□□□ 1.59
RCCD1-201ENST00000394258 USP35Q9P2H5 1018 aa24.99■■□□□ 1.59
RCCD1-201ENST00000394258 AGLP35573 1532 aa24.98■■□□□ 1.59
RCCD1-201ENST00000394258 WASLO00401 505 aaPredicted RBP24.98■■□□□ 1.59
RCCD1-201ENST00000394258 PNPLA6Q8IY17 1366 aa24.98■■□□□ 1.59
RCCD1-201ENST00000394258 NOB1Q9ULX3 412 aaKnown RBP24.98■■□□□ 1.59
RCCD1-201ENST00000394258 ITPRIPQ8IWB1 547 aa24.97■■□□□ 1.59
RCCD1-201ENST00000394258 PHACTR3Q96KR7 559 aa24.97■■□□□ 1.59
RCCD1-201ENST00000394258 THUMPD2Q9BTF0 503 aaKnown RBP24.97■■□□□ 1.59
RCCD1-201ENST00000394258 RWDD1Q9H446 243 aaPredicted RBP24.97■■□□□ 1.59
RCCD1-201ENST00000394258 FCHSD2O94868 740 aa24.96■■□□□ 1.59
RCCD1-201ENST00000394258 ANKRD26Q9UPS8 1709 aa24.96■■□□□ 1.59
RCCD1-201ENST00000394258 ZMYM3Q14202 1370 aa24.96■■□□□ 1.59
RCCD1-201ENST00000394258 SPATA31D1Q6ZQQ2 1576 aa24.96■■□□□ 1.59
RCCD1-201ENST00000394258 PNNQ9H307 717 aaKnown RBP24.95■■□□□ 1.58
RCCD1-201ENST00000394258 RSPH6AQ9H0K4 717 aa24.95■■□□□ 1.58
RCCD1-201ENST00000394258 NUDT16Q96DE0 195 aaKnown RBP24.94■■□□□ 1.58
RCCD1-201ENST00000394258 PPIP5K1Q6PFW1 1433 aa24.94■■□□□ 1.58
RCCD1-201ENST00000394258 CT47B1P0C2W7 299 aaPredicted RBP24.94■■□□□ 1.58
RCCD1-201ENST00000394258 AAMPQ13685 434 aa24.94■■□□□ 1.58
RCCD1-201ENST00000394258 BRPF3Q9ULD4 1205 aa24.93■■□□□ 1.58
RCCD1-201ENST00000394258 ATF7IPQ6VMQ6 1270 aa24.93■■□□□ 1.58
RCCD1-201ENST00000394258 RRS1Q15050 365 aaKnown RBP24.92■■□□□ 1.58
RCCD1-201ENST00000394258 VIRMAQ69YN4 1812 aaKnown RBP24.92■■□□□ 1.58
RCCD1-201ENST00000394258 KIF20BQ96Q89 1820 aa24.92■■□□□ 1.58
RCCD1-201ENST00000394258 NUTM2FA1L443 756 aa24.92■■□□□ 1.58
RCCD1-201ENST00000394258 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.92■■□□□ 1.58
RCCD1-201ENST00000394258 REREQ9P2R6 1566 aa24.92■■□□□ 1.58
RCCD1-201ENST00000394258 IL16Q14005 1332 aa24.91■■□□□ 1.58
RCCD1-201ENST00000394258 DLC1Q96QB1 1528 aa24.9■■□□□ 1.58
RCCD1-201ENST00000394258 TMEM57Q8N5G2 664 aa24.89■■□□□ 1.58
RCCD1-201ENST00000394258 ATP7BP35670 1465 aa24.89■■□□□ 1.58
RCCD1-201ENST00000394258 LRRC7Q96NW7 1537 aa24.89■■□□□ 1.58
RCCD1-201ENST00000394258 ELL2O00472 640 aaPredicted RBP24.89■■□□□ 1.57
RCCD1-201ENST00000394258 MAP2P11137 1827 aaKnown RBP24.88■■□□□ 1.57
RCCD1-201ENST00000394258 PLPPR3Q6T4P5 718 aa24.88■■□□□ 1.57
RCCD1-201ENST00000394258 CCDC61Q9Y6R9 512 aa24.88■■□□□ 1.57
RCCD1-201ENST00000394258 SETD1AO15047 1707 aaKnown RBP24.88■■□□□ 1.57
RCCD1-201ENST00000394258 COG3Q96JB2 828 aa24.87■■□□□ 1.57
RCCD1-201ENST00000394258 DDX19BQ9UMR2 479 aa24.86■■□□□ 1.57
RCCD1-201ENST00000394258 FRAT2O75474 233 aaPredicted RBP24.86■■□□□ 1.57
RCCD1-201ENST00000394258 IL13P35225 146 aa24.86■■□□□ 1.57
RCCD1-201ENST00000394258 NFE2L2Q16236 605 aa24.86■■□□□ 1.57
RCCD1-201ENST00000394258 CPSF1Q10570 1443 aaKnown RBP24.85■■□□□ 1.57
RCCD1-201ENST00000394258 NRXN3Q9Y4C0 1643 aa24.85■■□□□ 1.57
RCCD1-201ENST00000394258 FAM135BQ49AJ0 1406 aa24.84■■□□□ 1.57
RCCD1-201ENST00000394258 EDC4Q6P2E9 1401 aaKnown RBP24.84■■□□□ 1.57
RCCD1-201ENST00000394258 HDGFP51858 240 aaKnown RBP24.84■■□□□ 1.57
RCCD1-201ENST00000394258 TSPYL6Q8N831 410 aa24.83■■□□□ 1.57
RCCD1-201ENST00000394258 PRR36Q9H6K5 1346 aa24.82■■□□□ 1.56
RCCD1-201ENST00000394258 IPO8O15397 1037 aaKnown RBP24.82■■□□□ 1.56
RCCD1-201ENST00000394258 TNRQ92752 1358 aa24.82■■□□□ 1.56
RCCD1-201ENST00000394258 KIF16BQ96L93 1317 aa24.81■■□□□ 1.56
RCCD1-201ENST00000394258 CPS1P31327 1500 aa24.81■■□□□ 1.56
RCCD1-201ENST00000394258 FAM83GA6ND36 823 aa24.8■■□□□ 1.56
RCCD1-201ENST00000394258 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
RCCD1-201ENST00000394258 SOX12O15370 315 aa24.79■■□□□ 1.56
RCCD1-201ENST00000394258 DCTN1Q14203 1278 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms