RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 SETD1AO15047 1707 aaKnown RBP15.84■□□□□ 0.13
RFC5-201ENST00000392542 U2SURPO15042 1029 aaKnown RBP15.84■□□□□ 0.13
RFC5-201ENST00000392542 CT47B1P0C2W7 299 aaPredicted RBP15.83■□□□□ 0.12
RFC5-201ENST00000392542 PMFBP1Q8TBY8 1022 aa15.83■□□□□ 0.12
RFC5-201ENST00000392542 RLBP1P12271 317 aa15.82■□□□□ 0.12
RFC5-201ENST00000392542 TMPOP42166 694 aaKnown RBP15.82■□□□□ 0.12
RFC5-201ENST00000392542 MAPK8IP3Q9UPT6 1336 aa15.82■□□□□ 0.12
RFC5-201ENST00000392542 TNNQ9UQP3 1299 aa15.82■□□□□ 0.12
RFC5-201ENST00000392542 LAS1LQ9Y4W2 734 aaKnown RBP15.82■□□□□ 0.12
RFC5-201ENST00000392542 RIMS2Q9UQ26 1411 aa15.82■□□□□ 0.12
RFC5-201ENST00000392542 PPM1GO15355 546 aaPredicted RBP15.82■□□□□ 0.12
RFC5-201ENST00000392542 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
RFC5-201ENST00000392542 PNPLA6Q8IY17 1366 aa15.81■□□□□ 0.12
RFC5-201ENST00000392542 CABP1Q9NZU7 370 aa15.8■□□□□ 0.12
RFC5-201ENST00000392542 ATP7BP35670 1465 aa15.8■□□□□ 0.12
RFC5-201ENST00000392542 TRIM35Q9UPQ4 493 aa15.8■□□□□ 0.12
RFC5-201ENST00000392542 CDC42BPGQ6DT37 1551 aa15.8■□□□□ 0.12
RFC5-201ENST00000392542 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
RFC5-201ENST00000392542 BCL11AQ9H165 835 aa15.79■□□□□ 0.12
RFC5-201ENST00000392542 IL16Q14005 1332 aa15.79■□□□□ 0.12
RFC5-201ENST00000392542 TSR2Q969E8 191 aaKnown RBP15.78■□□□□ 0.12
RFC5-201ENST00000392542 USP35Q9P2H5 1018 aa15.78■□□□□ 0.12
RFC5-201ENST00000392542 PCDHB15Q9Y5E8 787 aa15.78■□□□□ 0.12
RFC5-201ENST00000392542 ZKSCAN2Q63HK3 967 aa15.78■□□□□ 0.12
RFC5-201ENST00000392542 PNNQ9H307 717 aaKnown RBP15.78■□□□□ 0.12
RFC5-201ENST00000392542 EXOSC9Q06265 439 aaKnown RBP15.77■□□□□ 0.11
RFC5-201ENST00000392542 MVPQ14764 893 aaKnown RBP15.77■□□□□ 0.11
RFC5-201ENST00000392542 NRXN3Q9Y4C0 1643 aa15.77■□□□□ 0.11
RFC5-201ENST00000392542 NEFMP07197 916 aa15.76■□□□□ 0.11
RFC5-201ENST00000392542 WAPLQ7Z5K2 1190 aa15.76■□□□□ 0.11
RFC5-201ENST00000392542 ZMYM3Q14202 1370 aa15.76■□□□□ 0.11
RFC5-201ENST00000392542 RIPK4P57078 832 aa15.75■□□□□ 0.11
RFC5-201ENST00000392542 DZIP1LQ8IYY4 767 aaKnown RBP15.75■□□□□ 0.11
RFC5-201ENST00000392542 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
RFC5-201ENST00000392542 LRRC7Q96NW7 1537 aa15.75■□□□□ 0.11
RFC5-201ENST00000392542 RWDD1Q9H446 243 aaPredicted RBP15.75■□□□□ 0.11
RFC5-201ENST00000392542 SMC4Q9NTJ3 1288 aa15.75■□□□□ 0.11
RFC5-201ENST00000392542 FTSJ3Q8IY81 847 aaKnown RBP15.74■□□□□ 0.11
RFC5-201ENST00000392542 FCHSD2O94868 740 aa15.73■□□□□ 0.11
RFC5-201ENST00000392542 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
RFC5-201ENST00000392542 MLECQ14165 292 aa15.73■□□□□ 0.11
RFC5-201ENST00000392542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.73■□□□□ 0.11
RFC5-201ENST00000392542 MAP2P11137 1827 aaKnown RBP15.73■□□□□ 0.11
RFC5-201ENST00000392542 KNDC1Q76NI1 1749 aa15.73■□□□□ 0.11
RFC5-201ENST00000392542 FAM135BQ49AJ0 1406 aa15.73■□□□□ 0.11
RFC5-201ENST00000392542 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
RFC5-201ENST00000392542 PDZRN3Q9UPQ7 1066 aa15.73■□□□□ 0.11
RFC5-201ENST00000392542 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.72■□□□□ 0.11
RFC5-201ENST00000392542 POLKQ9UBT6 870 aa15.72■□□□□ 0.11
RFC5-201ENST00000392542 USP19O94966 1318 aa15.72■□□□□ 0.11
RFC5-201ENST00000392542 CPSF1Q10570 1443 aaKnown RBP15.72■□□□□ 0.11
RFC5-201ENST00000392542 EDC4Q6P2E9 1401 aaKnown RBP15.72■□□□□ 0.11
RFC5-201ENST00000392542 RSPH6AQ9H0K4 717 aa15.71■□□□□ 0.11
RFC5-201ENST00000392542 WASLO00401 505 aaPredicted RBP15.7■□□□□ 0.1
RFC5-201ENST00000392542 TRIM27P14373 513 aa15.7■□□□□ 0.1
RFC5-201ENST00000392542 PPIP5K1Q6PFW1 1433 aa15.7■□□□□ 0.1
RFC5-201ENST00000392542 ATF7IPQ6VMQ6 1270 aa15.69■□□□□ 0.1
RFC5-201ENST00000392542 METP08581 1390 aa15.69■□□□□ 0.1
RFC5-201ENST00000392542 PRKAR2BP31323 418 aa15.69■□□□□ 0.1
RFC5-201ENST00000392542 DDX19BQ9UMR2 479 aa15.69■□□□□ 0.1
RFC5-201ENST00000392542 MON2Q7Z3U7 1717 aa15.69■□□□□ 0.1
RFC5-201ENST00000392542 TECPR2O15040 1411 aa15.68■□□□□ 0.1
RFC5-201ENST00000392542 SEC24BO95487 1268 aa15.68■□□□□ 0.1
RFC5-201ENST00000392542 FBLN1P23142 703 aa15.68■□□□□ 0.1
RFC5-201ENST00000392542 NOB1Q9ULX3 412 aaKnown RBP15.68■□□□□ 0.1
RFC5-201ENST00000392542 CDK12Q9NYV4 1490 aaPredicted RBP15.68■□□□□ 0.1
RFC5-201ENST00000392542 KIF16BQ96L93 1317 aa15.67■□□□□ 0.1
RFC5-201ENST00000392542 SIRT1Q96EB6 747 aa15.67■□□□□ 0.1
RFC5-201ENST00000392542 CPS1P31327 1500 aa15.67■□□□□ 0.1
RFC5-201ENST00000392542 KIF13AQ9H1H9 1805 aa15.67■□□□□ 0.1
RFC5-201ENST00000392542 ALDH1L2Q3SY69 923 aa15.67■□□□□ 0.1
RFC5-201ENST00000392542 AATKQ6ZMQ8 1374 aa15.66■□□□□ 0.1
RFC5-201ENST00000392542 ITPRIPQ8IWB1 547 aa15.66■□□□□ 0.1
RFC5-201ENST00000392542 AKAP12Q02952 1782 aa15.66■□□□□ 0.1
RFC5-201ENST00000392542 HDAC1Q13547 482 aaPredicted RBP15.66■□□□□ 0.1
RFC5-201ENST00000392542 NFKBIBQ15653 356 aa15.66■□□□□ 0.1
RFC5-201ENST00000392542 NFE2L2Q16236 605 aa15.66■□□□□ 0.1
RFC5-201ENST00000392542 TXNDC2Q86VQ3 553 aa15.66■□□□□ 0.1
RFC5-201ENST00000392542 ESF1Q9H501 851 aaKnown RBP15.66■□□□□ 0.1
RFC5-201ENST00000392542 ITSN1Q15811 1721 aa15.65■□□□□ 0.1
RFC5-201ENST00000392542 IPO8O15397 1037 aaKnown RBP15.65■□□□□ 0.1
RFC5-201ENST00000392542 NME9Q86XW9 330 aa15.65■□□□□ 0.1
RFC5-201ENST00000392542 NUDT16Q96DE0 195 aaKnown RBP15.65■□□□□ 0.1
RFC5-201ENST00000392542 EMILIN1Q9Y6C2 1016 aa15.65■□□□□ 0.1
RFC5-201ENST00000392542 IL13P35225 146 aa15.65■□□□□ 0.1
RFC5-201ENST00000392542 HDGFP51858 240 aaKnown RBP15.65■□□□□ 0.1
RFC5-201ENST00000392542 C3P01024 1663 aa15.64■□□□□ 0.09
RFC5-201ENST00000392542 TMEM57Q8N5G2 664 aa15.64■□□□□ 0.09
RFC5-201ENST00000392542 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
RFC5-201ENST00000392542 TNRQ92752 1358 aa15.64■□□□□ 0.09
RFC5-201ENST00000392542 HMOX1P09601 288 aa15.63■□□□□ 0.09
RFC5-201ENST00000392542 PHACTR3Q96KR7 559 aa15.63■□□□□ 0.09
RFC5-201ENST00000392542 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
RFC5-201ENST00000392542 UBR1Q8IWV7 1749 aa15.63■□□□□ 0.09
RFC5-201ENST00000392542 BRPF1P55201 1214 aaPredicted RBP15.63■□□□□ 0.09
RFC5-201ENST00000392542 CALD1Q05682 793 aaKnown RBP15.63■□□□□ 0.09
RFC5-201ENST00000392542 ZRANB1Q9UGI0 708 aa15.63■□□□□ 0.09
RFC5-201ENST00000392542 COG3Q96JB2 828 aa15.62■□□□□ 0.09
RFC5-201ENST00000392542 UPF2Q9HAU5 1272 aaKnown RBP15.62■□□□□ 0.09
RFC5-201ENST00000392542 ZBTB40Q9NUA8 1239 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms