RNA–Protein interactions for RNA: ENST00000392306.2

SH2D2A-203, Transcript of SH2 domain containing 2A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SH2D2A, Length 1,673 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2A-203ENST00000392306 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.39
SH2D2A-203ENST00000392306 RUNDC1Q96C34 613 aa17.52■□□□□ 0.39
SH2D2A-203ENST00000392306 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.39
SH2D2A-203ENST00000392306 GOLGA2Q08379 1002 aa17.51■□□□□ 0.39
SH2D2A-203ENST00000392306 DUSP27Q5VZP5 1158 aa17.51■□□□□ 0.39
SH2D2A-203ENST00000392306 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
SH2D2A-203ENST00000392306 PPP4R2Q9NY27 417 aa17.51■□□□□ 0.39
SH2D2A-203ENST00000392306 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
SH2D2A-203ENST00000392306 NKTRP30414 1462 aaKnown RBP17.5■□□□□ 0.39
SH2D2A-203ENST00000392306 SSH2Q76I76 1423 aa17.5■□□□□ 0.39
SH2D2A-203ENST00000392306 ANKARQ7Z5J8 1434 aa17.5■□□□□ 0.39
SH2D2A-203ENST00000392306 SLFN5Q08AF3 891 aa17.49■□□□□ 0.39
SH2D2A-203ENST00000392306 FMN2Q9NZ56 1722 aa17.49■□□□□ 0.39
SH2D2A-203ENST00000392306 MAP2P11137 1827 aaKnown RBP17.49■□□□□ 0.39
SH2D2A-203ENST00000392306 IRX6P78412 446 aaPredicted RBP17.48■□□□□ 0.39
SH2D2A-203ENST00000392306 CCDC27Q2M243 656 aa17.48■□□□□ 0.39
SH2D2A-203ENST00000392306 NCKAP5LQ9HCH0 1330 aa17.48■□□□□ 0.39
SH2D2A-203ENST00000392306 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
SH2D2A-203ENST00000392306 USP6P35125 1406 aa17.48■□□□□ 0.39
SH2D2A-203ENST00000392306 NALCNQ8IZF0 1738 aa17.47■□□□□ 0.39
SH2D2A-203ENST00000392306 LMTK3Q96Q04 1460 aa17.47■□□□□ 0.39
SH2D2A-203ENST00000392306 CDK12Q9NYV4 1490 aaPredicted RBP17.46■□□□□ 0.39
SH2D2A-203ENST00000392306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
SH2D2A-203ENST00000392306 POLKQ9UBT6 870 aa17.46■□□□□ 0.39
SH2D2A-203ENST00000392306 KCNA6P17658 529 aa17.45■□□□□ 0.38
SH2D2A-203ENST00000392306 OVOS2A0A0J9YW53 1432 aa17.45■□□□□ 0.38
SH2D2A-203ENST00000392306 OVOS2Q6IE36 1432 aa17.45■□□□□ 0.38
SH2D2A-203ENST00000392306 ACEP12821 1306 aa17.45■□□□□ 0.38
SH2D2A-203ENST00000392306 E9PSI1 815 aa17.45■□□□□ 0.38
SH2D2A-203ENST00000392306 NPHP4O75161 1426 aaPredicted RBP17.44■□□□□ 0.38
SH2D2A-203ENST00000392306 TTC21BQ7Z4L5 1316 aa17.44■□□□□ 0.38
SH2D2A-203ENST00000392306 NME9Q86XW9 330 aa17.44■□□□□ 0.38
SH2D2A-203ENST00000392306 WWC1Q8IX03 1113 aa17.44■□□□□ 0.38
SH2D2A-203ENST00000392306 TCP11L2Q8N4U5 519 aa17.44■□□□□ 0.38
SH2D2A-203ENST00000392306 PLEKHF1Q96S99 279 aa17.44■□□□□ 0.38
SH2D2A-203ENST00000392306 NWD1Q149M9 1564 aa17.44■□□□□ 0.38
SH2D2A-203ENST00000392306 RGPD8O14715 1765 aaPredicted RBP17.44■□□□□ 0.38
SH2D2A-203ENST00000392306 DIAPH1O60610 1272 aaKnown RBP17.42■□□□□ 0.38
SH2D2A-203ENST00000392306 HSPA2P54652 639 aa17.42■□□□□ 0.38
SH2D2A-203ENST00000392306 USP54Q70EL1 1684 aa17.42■□□□□ 0.38
SH2D2A-203ENST00000392306 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
SH2D2A-203ENST00000392306 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
SH2D2A-203ENST00000392306 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
SH2D2A-203ENST00000392306 COG3Q96JB2 828 aa17.42■□□□□ 0.38
SH2D2A-203ENST00000392306 USP31Q70CQ4 1352 aa17.41■□□□□ 0.38
SH2D2A-203ENST00000392306 TTC21AQ8NDW8 1320 aa17.41■□□□□ 0.38
SH2D2A-203ENST00000392306 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
SH2D2A-203ENST00000392306 LRRC7Q96NW7 1537 aa17.41■□□□□ 0.38
SH2D2A-203ENST00000392306 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
SH2D2A-203ENST00000392306 STRCQ7RTU9 1775 aa17.38■□□□□ 0.37
SH2D2A-203ENST00000392306 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
SH2D2A-203ENST00000392306 FCHSD2O94868 740 aa17.38■□□□□ 0.37
SH2D2A-203ENST00000392306 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
SH2D2A-203ENST00000392306 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
SH2D2A-203ENST00000392306 IL13P35225 146 aa17.36■□□□□ 0.37
SH2D2A-203ENST00000392306 EMILIN1Q9Y6C2 1016 aa17.36■□□□□ 0.37
SH2D2A-203ENST00000392306 PIK3C2AO00443 1686 aa17.35■□□□□ 0.37
SH2D2A-203ENST00000392306 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
SH2D2A-203ENST00000392306 TMPOP42166 694 aaKnown RBP17.34■□□□□ 0.37
SH2D2A-203ENST00000392306 RSPH6AQ9H0K4 717 aa17.34■□□□□ 0.37
SH2D2A-203ENST00000392306 NUTM2FA1L443 756 aa17.33■□□□□ 0.37
SH2D2A-203ENST00000392306 FBLN1P23142 703 aa17.33■□□□□ 0.37
SH2D2A-203ENST00000392306 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.36
SH2D2A-203ENST00000392306 IL16Q14005 1332 aa17.32■□□□□ 0.36
SH2D2A-203ENST00000392306 PEAK1Q9H792 1746 aa17.32■□□□□ 0.36
SH2D2A-203ENST00000392306 RRP7AQ9Y3A4 280 aaKnown RBP17.32■□□□□ 0.36
SH2D2A-203ENST00000392306 MAPK8IP3Q9UPT6 1336 aa17.32■□□□□ 0.36
SH2D2A-203ENST00000392306 RGPD1P0DJD0 1748 aa17.31■□□□□ 0.36
SH2D2A-203ENST00000392306 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
SH2D2A-203ENST00000392306 TRIM35Q9UPQ4 493 aa17.31■□□□□ 0.36
SH2D2A-203ENST00000392306 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
SH2D2A-203ENST00000392306 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
SH2D2A-203ENST00000392306 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.29■□□□□ 0.36
SH2D2A-203ENST00000392306 STRCP1A6NGW2 1772 aa17.29■□□□□ 0.36
SH2D2A-203ENST00000392306 RRS1Q15050 365 aaKnown RBP17.29■□□□□ 0.36
SH2D2A-203ENST00000392306 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
SH2D2A-203ENST00000392306 EXOC6Q8TAG9 804 aa17.29■□□□□ 0.36
SH2D2A-203ENST00000392306 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
SH2D2A-203ENST00000392306 MYH16Q9H6N6 1097 aa17.28■□□□□ 0.36
SH2D2A-203ENST00000392306 PPM1GO15355 546 aaPredicted RBP17.27■□□□□ 0.36
SH2D2A-203ENST00000392306 CT47B1P0C2W7 299 aaPredicted RBP17.27■□□□□ 0.36
SH2D2A-203ENST00000392306 TSHZ2Q9NRE2 1034 aa17.27■□□□□ 0.36
SH2D2A-203ENST00000392306 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
SH2D2A-203ENST00000392306 PHF8Q9UPP1 1060 aa17.26■□□□□ 0.35
SH2D2A-203ENST00000392306 NCOA3Q9Y6Q9 1424 aa17.26■□□□□ 0.35
SH2D2A-203ENST00000392306 PLIN1O60240 522 aa17.26■□□□□ 0.35
SH2D2A-203ENST00000392306 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
SH2D2A-203ENST00000392306 SBNO1A3KN83 1393 aa17.25■□□□□ 0.35
SH2D2A-203ENST00000392306 RIPK4P57078 832 aa17.25■□□□□ 0.35
SH2D2A-203ENST00000392306 NFE2L2Q16236 605 aa17.24■□□□□ 0.35
SH2D2A-203ENST00000392306 FLT4P35916 1363 aa17.24■□□□□ 0.35
SH2D2A-203ENST00000392306 EIF4A2Q14240 407 aaKnown RBP17.23■□□□□ 0.35
SH2D2A-203ENST00000392306 NEFMP07197 916 aa17.23■□□□□ 0.35
SH2D2A-203ENST00000392306 CRBNQ96SW2 442 aa17.23■□□□□ 0.35
SH2D2A-203ENST00000392306 DLG5Q8TDM6 1919 aa17.22■□□□□ 0.35
SH2D2A-203ENST00000392306 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
SH2D2A-203ENST00000392306 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
SH2D2A-203ENST00000392306 RBM33Q96EV2 1170 aaKnown RBP17.22■□□□□ 0.35
SH2D2A-203ENST00000392306 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
SH2D2A-203ENST00000392306 KIF1AQ12756 1690 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms