RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 CFAP70Q5T0N1 1121 aa8.57□□□□□ -1.04
RNU6-549P-201ENST00000384433 PTCRAQ6ISU1 281 aaPredicted RBP8.57□□□□□ -1.04
RNU6-549P-201ENST00000384433 NKX2-3Q8TAU0 364 aa8.56□□□□□ -1.04
RNU6-549P-201ENST00000384433 NUDT12Q9BQG2 462 aa8.56□□□□□ -1.04
RNU6-549P-201ENST00000384433 OCSTAMPQ9BR26 566 aa8.56□□□□□ -1.04
RNU6-549P-201ENST00000384433 EVA1BQ9NVM1 165 aa8.56□□□□□ -1.04
RNU6-549P-201ENST00000384433 CCNYL3P0C7X3 344 aa8.55□□□□□ -1.04
RNU6-549P-201ENST00000384433 KCNH2Q12809 1159 aa8.55□□□□□ -1.04
RNU6-549P-201ENST00000384433 NR1H3Q13133 447 aa8.55□□□□□ -1.04
RNU6-549P-201ENST00000384433 PPP1R12CQ9BZL4 782 aa8.55□□□□□ -1.04
RNU6-549P-201ENST00000384433 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.54□□□□□ -1.04
RNU6-549P-201ENST00000384433 PALM3A6NDB9 673 aaPredicted RBP8.54□□□□□ -1.04
RNU6-549P-201ENST00000384433 ADH1BP00325 375 aa8.54□□□□□ -1.04
RNU6-549P-201ENST00000384433 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
RNU6-549P-201ENST00000384433 ZBBXA8MT70 800 aa8.53□□□□□ -1.04
RNU6-549P-201ENST00000384433 PIK3CDO00329 1044 aa8.53□□□□□ -1.04
RNU6-549P-201ENST00000384433 SRPK2P78362 688 aaKnown RBP8.53□□□□□ -1.04
RNU6-549P-201ENST00000384433 TBC1D9Q6ZT07 1266 aa8.53□□□□□ -1.04
RNU6-549P-201ENST00000384433 RETREG2Q8NC44 543 aa8.53□□□□□ -1.04
RNU6-549P-201ENST00000384433 SEMA3FQ13275 785 aa8.52□□□□□ -1.05
RNU6-549P-201ENST00000384433 CDCA8Q53HL2 280 aa8.52□□□□□ -1.05
RNU6-549P-201ENST00000384433 CCDC24Q8N4L8 307 aa8.52□□□□□ -1.05
RNU6-549P-201ENST00000384433 PDIA4P13667 645 aaKnown RBP8.51□□□□□ -1.05
RNU6-549P-201ENST00000384433 IL21Q9HBE4 155 aa8.51□□□□□ -1.05
RNU6-549P-201ENST00000384433 S1PR4O95977 384 aa8.5□□□□□ -1.05
RNU6-549P-201ENST00000384433 LMOD1P29536 600 aaPredicted RBP8.5□□□□□ -1.05
RNU6-549P-201ENST00000384433 NYAP1Q6ZVC0 841 aa8.5□□□□□ -1.05
RNU6-549P-201ENST00000384433 SLC6A16Q9GZN6 736 aa8.5□□□□□ -1.05
RNU6-549P-201ENST00000384433 CARNS1A5YM72 827 aa8.49□□□□□ -1.05
RNU6-549P-201ENST00000384433 SOX11P35716 441 aa8.49□□□□□ -1.05
RNU6-549P-201ENST00000384433 EIF4G2P78344 907 aaKnown RBP eCLIP8.49□□□□□ -1.05
RNU6-549P-201ENST00000384433 PNMA1Q8ND90 353 aa8.49□□□□□ -1.05
RNU6-549P-201ENST00000384433 UNC93B1Q9H1C4 597 aa8.49□□□□□ -1.05
RNU6-549P-201ENST00000384433 FAM174AQ8TBP5 190 aa8.48□□□□□ -1.05
RNU6-549P-201ENST00000384433 PBXIP1Q96AQ6 731 aa8.48□□□□□ -1.05
RNU6-549P-201ENST00000384433 MYT1LQ9UL68 1186 aa8.48□□□□□ -1.05
RNU6-549P-201ENST00000384433 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
RNU6-549P-201ENST00000384433 ZC3H4Q9UPT8 1303 aaKnown RBP8.48□□□□□ -1.05
RNU6-549P-201ENST00000384433 PPEF1O14829 653 aaPredicted RBP8.47□□□□□ -1.05
RNU6-549P-201ENST00000384433 PPP1R15AO75807 674 aaPredicted RBP8.47□□□□□ -1.05
RNU6-549P-201ENST00000384433 PDXDC2PQ6P474 469 aa8.47□□□□□ -1.05
RNU6-549P-201ENST00000384433 PODXL2Q9NZ53 605 aa8.46□□□□□ -1.06
RNU6-549P-201ENST00000384433 FCF1Q9Y324 198 aaKnown RBP8.46□□□□□ -1.06
RNU6-549P-201ENST00000384433 ATP9BO43861 1147 aa8.45□□□□□ -1.06
RNU6-549P-201ENST00000384433 PTK2Q05397 1052 aa8.45□□□□□ -1.06
RNU6-549P-201ENST00000384433 LINC01559Q495D7 138 aa8.45□□□□□ -1.06
RNU6-549P-201ENST00000384433 SH3BP5LQ7L8J4 393 aa8.45□□□□□ -1.06
RNU6-549P-201ENST00000384433 ADAM32Q8TC27 787 aa8.45□□□□□ -1.06
RNU6-549P-201ENST00000384433 BAP1Q92560 729 aa8.45□□□□□ -1.06
RNU6-549P-201ENST00000384433 TRAIPQ9BWF2 469 aa8.45□□□□□ -1.06
RNU6-549P-201ENST00000384433 PCDHB9Q9Y5E1 797 aa8.45□□□□□ -1.06
RNU6-549P-201ENST00000384433 TSGA10IPQ3SY00 556 aa8.44□□□□□ -1.06
RNU6-549P-201ENST00000384433 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
RNU6-549P-201ENST00000384433 ARMC2Q8NEN0 867 aa8.44□□□□□ -1.06
RNU6-549P-201ENST00000384433 FOXJ1Q92949 421 aa8.44□□□□□ -1.06
RNU6-549P-201ENST00000384433 CEP126Q9P2H0 1117 aa8.44□□□□□ -1.06
RNU6-549P-201ENST00000384433 DEPDC4Q8N2C3 294 aa8.43□□□□□ -1.06
RNU6-549P-201ENST00000384433 ARHGAP9Q9BRR9 750 aa8.43□□□□□ -1.06
RNU6-549P-201ENST00000384433 GPSM3Q9Y4H4 160 aa8.43□□□□□ -1.06
RNU6-549P-201ENST00000384433 ACIN1Q9UKV3 1341 aaKnown RBP8.43□□□□□ -1.06
RNU6-549P-201ENST00000384433 SKIP12755 728 aa8.42□□□□□ -1.06
RNU6-549P-201ENST00000384433 KANK4Q5T7N3 995 aaPredicted RBP8.42□□□□□ -1.06
RNU6-549P-201ENST00000384433 NBPF14Q5TI25 921 aa8.42□□□□□ -1.06
RNU6-549P-201ENST00000384433 PHTF2Q8N3S3 785 aa8.42□□□□□ -1.06
RNU6-549P-201ENST00000384433 GPKOWQ92917 476 aaPredicted RBP eCLIP8.42□□□□□ -1.06
RNU6-549P-201ENST00000384433 CARD14Q9BXL6 1004 aa8.42□□□□□ -1.06
RNU6-549P-201ENST00000384433 MAGEB6P1A0A0J9YX57 407 aa8.41□□□□□ -1.06
RNU6-549P-201ENST00000384433 PLA2G2CQ5R387 149 aa8.41□□□□□ -1.06
RNU6-549P-201ENST00000384433 SH3RF1Q7Z6J0 888 aa8.41□□□□□ -1.06
RNU6-549P-201ENST00000384433 USP17L3A6NCW0 530 aa8.39□□□□□ -1.07
RNU6-549P-201ENST00000384433 USP17L4A6NCW7 530 aa8.39□□□□□ -1.07
RNU6-549P-201ENST00000384433 USP17L5A8MUK1 530 aa8.39□□□□□ -1.07
RNU6-549P-201ENST00000384433 USP17L2Q6R6M4 530 aa8.39□□□□□ -1.07
RNU6-549P-201ENST00000384433 USP17L1Q7RTZ2 530 aa8.39□□□□□ -1.07
RNU6-549P-201ENST00000384433 ZBTB33Q86T24 672 aa8.39□□□□□ -1.07
RNU6-549P-201ENST00000384433 AEBP1Q8IUX7 1158 aa8.39□□□□□ -1.07
RNU6-549P-201ENST00000384433 SPNS2Q8IVW8 549 aa8.39□□□□□ -1.07
RNU6-549P-201ENST00000384433 ZNF511Q8NB15 262 aa8.39□□□□□ -1.07
RNU6-549P-201ENST00000384433 RNF223E7ERA6 249 aa8.38□□□□□ -1.07
RNU6-549P-201ENST00000384433 SH3BP2P78314 561 aa8.38□□□□□ -1.07
RNU6-549P-201ENST00000384433 ERFEQ4G0M1 354 aa8.38□□□□□ -1.07
RNU6-549P-201ENST00000384433 VRTNQ9H8Y1 702 aa8.38□□□□□ -1.07
RNU6-549P-201ENST00000384433 ATG7O95352 703 aa8.37□□□□□ -1.07
RNU6-549P-201ENST00000384433 KCNC4Q03721 635 aa8.37□□□□□ -1.07
RNU6-549P-201ENST00000384433 SLFNL1Q499Z3 407 aa8.37□□□□□ -1.07
RNU6-549P-201ENST00000384433 RNF135Q8IUD6 432 aa8.37□□□□□ -1.07
RNU6-549P-201ENST00000384433 PLPP7Q8NBV4 271 aa8.37□□□□□ -1.07
RNU6-549P-201ENST00000384433 NFATC2IPQ8NCF5 419 aa8.37□□□□□ -1.07
RNU6-549P-201ENST00000384433 RNF166Q96A37 237 aaPredicted RBP8.37□□□□□ -1.07
RNU6-549P-201ENST00000384433 CCDC85AQ96PX6 553 aaPredicted RBP8.37□□□□□ -1.07
RNU6-549P-201ENST00000384433 TMEM88BA6NKF7 163 aa8.36□□□□□ -1.07
RNU6-549P-201ENST00000384433 GIGYF1O75420 1035 aaPredicted RBP8.36□□□□□ -1.07
RNU6-549P-201ENST00000384433 NCOA4Q13772 614 aa8.36□□□□□ -1.07
RNU6-549P-201ENST00000384433 AGERQ15109 404 aa8.36□□□□□ -1.07
RNU6-549P-201ENST00000384433 DZIP3Q86Y13 1208 aaKnown RBP8.36□□□□□ -1.07
RNU6-549P-201ENST00000384433 HCSTQ9UBK5 93 aa8.36□□□□□ -1.07
RNU6-549P-201ENST00000384433 ITGBL1O95965 494 aaPredicted RBP8.35□□□□□ -1.07
RNU6-549P-201ENST00000384433 CSB-PGBD3P0DP91 1061 aa8.35□□□□□ -1.07
RNU6-549P-201ENST00000384433 SKOR1P84550 965 aa8.35□□□□□ -1.07
RNU6-549P-201ENST00000384433 TRAF7Q6Q0C0 670 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms