RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 C19orf44Q9H6X5 657 aa2.31□□□□□ -2.04
RNU6-42P-201ENST00000384165 ABCC5O15440 1437 aa2.31□□□□□ -2.04
RNU6-42P-201ENST00000384165 FMN1Q68DA7 1419 aa2.31□□□□□ -2.04
RNU6-42P-201ENST00000384165 A2ML1A8K2U0 1454 aa2.31□□□□□ -2.04
RNU6-42P-201ENST00000384165 MAP3K1Q13233 1512 aa2.31□□□□□ -2.04
RNU6-42P-201ENST00000384165 BRWD3Q6RI45 1802 aa2.31□□□□□ -2.04
RNU6-42P-201ENST00000384165 RANBP2P49792 3224 aaKnown RBP2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 ANKRD17O75179 2603 aaKnown RBP2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 SMIM22K7EJ46 135 aa2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 MAP2K2P36507 400 aa2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 PDE3BQ13370 1112 aa2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 CTU1Q7Z7A3 348 aaKnown RBP2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 DPF3Q92784 378 aa2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 CHAMP1Q96JM3 812 aa2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 ABT1Q9ULW3 272 aaKnown RBP2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 EID1Q9Y6B2 187 aa2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 ADGBQ8N7X0 1667 aa2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 RGPD1P0DJD0 1748 aa2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 SPHKAPQ2M3C7 1700 aa2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 TPRP12270 2363 aaKnown RBP2.3□□□□□ -2.04
RNU6-42P-201ENST00000384165 STRCP1A6NGW2 1772 aa2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 ARHGEF28Q8N1W1 1705 aaKnown RBP2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 RASSF10A6NK89 507 aa2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 HAP1P54257 671 aaPredicted RBP2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 RIPPLY3P57055 190 aa2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 C9orf131Q5VYM1 1079 aa2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 MAFAQ8NHW3 353 aaPredicted RBP2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 DDX17Q92841 729 aaKnown RBP2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 BCANQ96GW7 911 aa2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 UHRF1Q96T88 793 aaPredicted RBP2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 CD2APQ9Y5K6 639 aa2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 MUC3AQ02505 3323 aa2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 ITPR3Q14573 2671 aa2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 CASP8AP2Q9UKL3 1982 aa2.29□□□□□ -2.04
RNU6-42P-201ENST00000384165 WIZO95785 1651 aa2.28□□□□□ -2.04
RNU6-42P-201ENST00000384165 PEG3Q9GZU2 1588 aa2.28□□□□□ -2.04
RNU6-42P-201ENST00000384165 TULP4Q9NRJ4 1543 aa2.28□□□□□ -2.04
RNU6-42P-201ENST00000384165 PXDNLA1KZ92 1463 aa2.28□□□□□ -2.04
RNU6-42P-201ENST00000384165 PRAG1Q86YV5 1406 aa2.28□□□□□ -2.04
RNU6-42P-201ENST00000384165 NANOS1Q8WY41 292 aaKnown RBP2.28□□□□□ -2.04
RNU6-42P-201ENST00000384165 CAPNS2Q96L46 248 aa2.28□□□□□ -2.04
RNU6-42P-201ENST00000384165 KCNH6Q9H252 994 aa2.28□□□□□ -2.04
RNU6-42P-201ENST00000384165 SIGLEC1Q9BZZ2 1709 aa2.28□□□□□ -2.05
RNU6-42P-201ENST00000384165 CFAP54Q96N23 3096 aa2.28□□□□□ -2.05
RNU6-42P-201ENST00000384165 ADGRB2O60241 1585 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 ABCC3O15438 1527 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 ZCCHC6Q5VYS8 1495 aaKnown RBP2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 USP24Q9UPU5 2620 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 C10orf71Q711Q0 1435 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 CNTNAP4Q9C0A0 1308 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 C11orf95C9JLR9 678 aaPredicted RBP2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 GFRA3O60609 400 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 GPR37L1O60883 481 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 AKAP4Q5JQC9 854 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 INTS3Q68E01 1043 aaKnown RBP2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 PRR23BQ6ZRT6 265 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 ADAMTS19Q8TE59 1207 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 UIMC1Q96RL1 719 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 SPTBN4Q9H254 2564 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 DNMT1P26358 1616 aaKnown RBP2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 FAM208BQ5VWN6 2430 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 ABCC1P33527 1531 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 CENPFP49454 3210 aa2.27□□□□□ -2.05
RNU6-42P-201ENST00000384165 PTPRZ1P23471 2315 aaPredicted RBP2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 DNAH12Q6ZR08 3092 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 KALRNO60229 2985 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 PLEKHG2Q9H7P9 1386 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 POLR1AO95602 1720 aaPredicted RBP2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 CEP290O15078 2479 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 MED19A0JLT2 244 aaPredicted RBP2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 EGFRP00533 1210 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 HNRNPUL2Q1KMD3 747 aaKnown RBP2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 GGT6Q6P531 493 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 WHAMMQ8TF30 809 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 SLC26A8Q96RN1 970 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 EPHX3Q9H6B9 360 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 HDAC9Q9UKV0 1011 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 NR2E3Q9Y5X4 410 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 MKI67P46013 3256 aaKnown RBP2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 C5orf42Q9H799 3197 aa2.26□□□□□ -2.05
RNU6-42P-201ENST00000384165 PIK3C2AO00443 1686 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 MYO18BQ8IUG5 2567 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 FBN3Q75N90 2809 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 IRS2Q9Y4H2 1338 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 GLI3P10071 1580 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 A0A1B0GTL3 188 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 POTEFA5A3E0 1075 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 EN2P19622 333 aaPredicted RBP2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 FBXO31Q5XUX0 539 aaPredicted RBP2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 DGLUCYQ7Z3D6 616 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 PROM2Q8N271 834 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 CABLES1Q8TDN4 633 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 ATXN2LQ8WWM7 1075 aaKnown RBP2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 FBXL18Q96ME1 805 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 BRCA2P51587 3418 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 WRNQ14191 1432 aaPredicted RBP eCLIP2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 YTHDC2Q9H6S0 1430 aaKnown RBP2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 IQGAP1P46940 1657 aa2.25□□□□□ -2.05
RNU6-42P-201ENST00000384165 TNRQ92752 1358 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms