RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 ROBO2Q9HCK4 1378 aa22.38■■□□□ 1.17
PDX1-201ENST00000381033 NUDT16Q96DE0 195 aaKnown RBP22.38■■□□□ 1.17
PDX1-201ENST00000381033 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
PDX1-201ENST00000381033 PPIP5K1Q6PFW1 1433 aa22.37■■□□□ 1.17
PDX1-201ENST00000381033 ADAMTS13Q76LX8 1427 aa22.36■■□□□ 1.17
PDX1-201ENST00000381033 PRR36Q9H6K5 1346 aa22.36■■□□□ 1.17
PDX1-201ENST00000381033 HDGFP51858 240 aaKnown RBP22.35■■□□□ 1.17
PDX1-201ENST00000381033 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
PDX1-201ENST00000381033 BCL2L13Q9BXK5 485 aa22.35■■□□□ 1.17
PDX1-201ENST00000381033 COL3A1P02461 1466 aaPredicted RBP22.35■■□□□ 1.17
PDX1-201ENST00000381033 POLKQ9UBT6 870 aa22.34■■□□□ 1.17
PDX1-201ENST00000381033 EMILIN1Q9Y6C2 1016 aa22.33■■□□□ 1.17
PDX1-201ENST00000381033 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
PDX1-201ENST00000381033 NGEFQ8N5V2 710 aa22.32■■□□□ 1.16
PDX1-201ENST00000381033 TNNQ9UQP3 1299 aa22.32■■□□□ 1.16
PDX1-201ENST00000381033 DIAPH1O60610 1272 aaKnown RBP22.31■■□□□ 1.16
PDX1-201ENST00000381033 FRAT1Q92837 279 aaPredicted RBP22.31■■□□□ 1.16
PDX1-201ENST00000381033 TSR2Q969E8 191 aaKnown RBP22.31■■□□□ 1.16
PDX1-201ENST00000381033 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.31■■□□□ 1.16
PDX1-201ENST00000381033 ANKRD26Q9UPS8 1709 aa22.31■■□□□ 1.16
PDX1-201ENST00000381033 CCDC61Q9Y6R9 512 aa22.31■■□□□ 1.16
PDX1-201ENST00000381033 CPSF1Q10570 1443 aaKnown RBP22.3■■□□□ 1.16
PDX1-201ENST00000381033 KIF20BQ96Q89 1820 aa22.3■■□□□ 1.16
PDX1-201ENST00000381033 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.3■■□□□ 1.16
PDX1-201ENST00000381033 PANK1Q8TE04 598 aa22.3■■□□□ 1.16
PDX1-201ENST00000381033 MED14O60244 1454 aa22.3■■□□□ 1.16
PDX1-201ENST00000381033 TMPOP42166 694 aaKnown RBP22.29■■□□□ 1.16
PDX1-201ENST00000381033 ATP7BP35670 1465 aa22.29■■□□□ 1.16
PDX1-201ENST00000381033 RRS1Q15050 365 aaKnown RBP22.29■■□□□ 1.16
PDX1-201ENST00000381033 TRIM35Q9UPQ4 493 aa22.29■■□□□ 1.16
PDX1-201ENST00000381033 FANCIQ9NVI1 1328 aa22.29■■□□□ 1.16
PDX1-201ENST00000381033 WDR63Q8IWG1 891 aa22.28■■□□□ 1.16
PDX1-201ENST00000381033 CPS1P31327 1500 aa22.28■■□□□ 1.16
PDX1-201ENST00000381033 HMOX1P09601 288 aa22.28■■□□□ 1.16
PDX1-201ENST00000381033 PTPRUQ92729 1446 aa22.28■■□□□ 1.16
PDX1-201ENST00000381033 C3P01024 1663 aa22.28■■□□□ 1.16
PDX1-201ENST00000381033 TECPR2O15040 1411 aa22.27■■□□□ 1.16
PDX1-201ENST00000381033 FAM135BQ49AJ0 1406 aa22.27■■□□□ 1.16
PDX1-201ENST00000381033 PNPLA6Q8IY17 1366 aa22.27■■□□□ 1.16
PDX1-201ENST00000381033 RARSP54136 660 aaKnown RBP22.27■■□□□ 1.16
PDX1-201ENST00000381033 CCDC27Q2M243 656 aa22.27■■□□□ 1.16
PDX1-201ENST00000381033 MAP2P11137 1827 aaKnown RBP22.26■■□□□ 1.15
PDX1-201ENST00000381033 COG6Q9Y2V7 657 aa22.26■■□□□ 1.15
PDX1-201ENST00000381033 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.25■■□□□ 1.15
PDX1-201ENST00000381033 PLEKHG1Q9ULL1 1385 aa22.25■■□□□ 1.15
PDX1-201ENST00000381033 KDM2BQ8NHM5 1336 aa22.24■■□□□ 1.15
PDX1-201ENST00000381033 MAPK8IP3Q9UPT6 1336 aa22.24■■□□□ 1.15
PDX1-201ENST00000381033 RIPK4P57078 832 aa22.24■■□□□ 1.15
PDX1-201ENST00000381033 AMOTL2Q9Y2J4 779 aa22.24■■□□□ 1.15
PDX1-201ENST00000381033 CANXP27824 592 aaKnown RBP22.24■■□□□ 1.15
PDX1-201ENST00000381033 EID1Q9Y6B2 187 aa22.24■■□□□ 1.15
PDX1-201ENST00000381033 ADGRB2O60241 1585 aa22.24■■□□□ 1.15
PDX1-201ENST00000381033 EDC4Q6P2E9 1401 aaKnown RBP22.23■■□□□ 1.15
PDX1-201ENST00000381033 SIRT1Q96EB6 747 aa22.23■■□□□ 1.15
PDX1-201ENST00000381033 PHACTR3Q96KR7 559 aa22.23■■□□□ 1.15
PDX1-201ENST00000381033 PRKAR2BP31323 418 aa22.23■■□□□ 1.15
PDX1-201ENST00000381033 CLUAP1Q96AJ1 413 aa22.23■■□□□ 1.15
PDX1-201ENST00000381033 RLBP1P12271 317 aa22.22■■□□□ 1.15
PDX1-201ENST00000381033 DEKP35659 375 aaKnown RBP22.22■■□□□ 1.15
PDX1-201ENST00000381033 KNDC1Q76NI1 1749 aa22.22■■□□□ 1.15
PDX1-201ENST00000381033 ACEP12821 1306 aa22.21■■□□□ 1.15
PDX1-201ENST00000381033 SOX12O15370 315 aa22.2■■□□□ 1.14
PDX1-201ENST00000381033 PMFBP1Q8TBY8 1022 aa22.2■■□□□ 1.14
PDX1-201ENST00000381033 FER1L4A9Z1Z3 1794 aa22.2■■□□□ 1.14
PDX1-201ENST00000381033 EXOSC9Q06265 439 aaKnown RBP22.2■■□□□ 1.14
PDX1-201ENST00000381033 COG3Q96JB2 828 aa22.2■■□□□ 1.14
PDX1-201ENST00000381033 RSPH6AQ9H0K4 717 aa22.2■■□□□ 1.14
PDX1-201ENST00000381033 FGD1P98174 961 aa22.19■■□□□ 1.14
PDX1-201ENST00000381033 THUMPD2Q9BTF0 503 aaKnown RBP22.19■■□□□ 1.14
PDX1-201ENST00000381033 CDC42BPGQ6DT37 1551 aa22.19■■□□□ 1.14
PDX1-201ENST00000381033 TCERG1O14776 1098 aaKnown RBP22.18■■□□□ 1.14
PDX1-201ENST00000381033 IGHDP01880 384 aa22.18■■□□□ 1.14
PDX1-201ENST00000381033 MYH16Q9H6N6 1097 aa22.18■■□□□ 1.14
PDX1-201ENST00000381033 PDE4AP27815 886 aa22.18■■□□□ 1.14
PDX1-201ENST00000381033 LRRC7Q96NW7 1537 aa22.17■■□□□ 1.14
PDX1-201ENST00000381033 IL13P35225 146 aa22.17■■□□□ 1.14
PDX1-201ENST00000381033 FCHSD2O94868 740 aa22.16■■□□□ 1.14
PDX1-201ENST00000381033 RBM33Q96EV2 1170 aaKnown RBP22.16■■□□□ 1.14
PDX1-201ENST00000381033 THEMISQ8N1K5 641 aaPredicted RBP22.15■■□□□ 1.14
PDX1-201ENST00000381033 PDE3AQ14432 1141 aa22.15■■□□□ 1.14
PDX1-201ENST00000381033 NPM2Q86SE8 214 aaKnown RBP22.15■■□□□ 1.14
PDX1-201ENST00000381033 CENPQQ7L2Z9 268 aaPredicted RBP22.14■■□□□ 1.14
PDX1-201ENST00000381033 LAS1LQ9Y4W2 734 aaKnown RBP22.14■■□□□ 1.14
PDX1-201ENST00000381033 MON2Q7Z3U7 1717 aa22.14■■□□□ 1.13
PDX1-201ENST00000381033 TTC21BQ7Z4L5 1316 aa22.14■■□□□ 1.13
PDX1-201ENST00000381033 ZNF692Q9BU19 519 aaPredicted RBP22.13■■□□□ 1.13
PDX1-201ENST00000381033 RGS3P49796 1198 aa22.13■■□□□ 1.13
PDX1-201ENST00000381033 ARHGAP23Q9P227 1491 aa22.13■■□□□ 1.13
PDX1-201ENST00000381033 BACH2Q9BYV9 841 aa22.12■■□□□ 1.13
PDX1-201ENST00000381033 TBX22Q9Y458 520 aa22.12■■□□□ 1.13
PDX1-201ENST00000381033 SLIT1O75093 1534 aa22.12■■□□□ 1.13
PDX1-201ENST00000381033 AKAP12Q02952 1782 aa22.12■■□□□ 1.13
PDX1-201ENST00000381033 KCNA6P17658 529 aa22.11■■□□□ 1.13
PDX1-201ENST00000381033 ITSN1Q15811 1721 aa22.11■■□□□ 1.13
PDX1-201ENST00000381033 SSH1Q8WYL5 1049 aa22.1■■□□□ 1.13
PDX1-201ENST00000381033 AEBP1Q8IUX7 1158 aa22.1■■□□□ 1.13
PDX1-201ENST00000381033 BCL11BQ9C0K0 894 aaPredicted RBP22.1■■□□□ 1.13
PDX1-201ENST00000381033 PLEKHG3A1L390 1219 aa22.09■■□□□ 1.13
PDX1-201ENST00000381033 FAM83GA6ND36 823 aa22.09■■□□□ 1.13
PDX1-201ENST00000381033 PAK3O75914 559 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms