RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 SLC4A3P48751 1232 aa25.81■■□□□ 1.72
EBF1-202ENST00000380654 TRIM35Q9UPQ4 493 aa25.81■■□□□ 1.72
EBF1-202ENST00000380654 MED14O60244 1454 aa25.81■■□□□ 1.72
EBF1-202ENST00000380654 NCBP3Q53F19 620 aaKnown RBP25.8■■□□□ 1.72
EBF1-202ENST00000380654 PCDHB15Q9Y5E8 787 aa25.8■■□□□ 1.72
EBF1-202ENST00000380654 RTL5Q5HYW3 569 aaPredicted RBP25.8■■□□□ 1.72
EBF1-202ENST00000380654 KIF20BQ96Q89 1820 aa25.79■■□□□ 1.72
EBF1-202ENST00000380654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.79■■□□□ 1.72
EBF1-202ENST00000380654 AGLP35573 1532 aa25.79■■□□□ 1.72
EBF1-202ENST00000380654 REREQ9P2R6 1566 aa25.78■■□□□ 1.72
EBF1-202ENST00000380654 MAPK8IP3Q9UPT6 1336 aa25.78■■□□□ 1.72
EBF1-202ENST00000380654 RIMS2Q9UQ26 1411 aa25.77■■□□□ 1.72
EBF1-202ENST00000380654 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
EBF1-202ENST00000380654 SPATA31D1Q6ZQQ2 1576 aa25.77■■□□□ 1.72
EBF1-202ENST00000380654 EXOSC9Q06265 439 aaKnown RBP25.76■■□□□ 1.71
EBF1-202ENST00000380654 DIAPH1O60610 1272 aaKnown RBP25.76■■□□□ 1.71
EBF1-202ENST00000380654 BCL11AQ9H165 835 aa25.75■■□□□ 1.71
EBF1-202ENST00000380654 VIRMAQ69YN4 1812 aaKnown RBP25.74■■□□□ 1.71
EBF1-202ENST00000380654 PPM1GO15355 546 aaPredicted RBP25.74■■□□□ 1.71
EBF1-202ENST00000380654 PNPLA6Q8IY17 1366 aa25.74■■□□□ 1.71
EBF1-202ENST00000380654 RIPK4P57078 832 aa25.73■■□□□ 1.71
EBF1-202ENST00000380654 PPP6R1Q9UPN7 881 aa25.73■■□□□ 1.71
EBF1-202ENST00000380654 NEFMP07197 916 aa25.72■■□□□ 1.71
EBF1-202ENST00000380654 PMFBP1Q8TBY8 1022 aa25.71■■□□□ 1.71
EBF1-202ENST00000380654 DLC1Q96QB1 1528 aa25.71■■□□□ 1.71
EBF1-202ENST00000380654 ZKSCAN2Q63HK3 967 aa25.7■■□□□ 1.71
EBF1-202ENST00000380654 SMC4Q9NTJ3 1288 aa25.7■■□□□ 1.71
EBF1-202ENST00000380654 MVPQ14764 893 aaKnown RBP25.7■■□□□ 1.7
EBF1-202ENST00000380654 NRXN3Q9Y4C0 1643 aa25.69■■□□□ 1.7
EBF1-202ENST00000380654 SSH1Q8WYL5 1049 aa25.69■■□□□ 1.7
EBF1-202ENST00000380654 POLKQ9UBT6 870 aa25.69■■□□□ 1.7
EBF1-202ENST00000380654 SEC24BO95487 1268 aa25.68■■□□□ 1.7
EBF1-202ENST00000380654 FTSJ3Q8IY81 847 aaKnown RBP25.68■■□□□ 1.7
EBF1-202ENST00000380654 DZIP1LQ8IYY4 767 aaKnown RBP25.68■■□□□ 1.7
EBF1-202ENST00000380654 AAMPQ13685 434 aa25.68■■□□□ 1.7
EBF1-202ENST00000380654 LRRC7Q96NW7 1537 aa25.68■■□□□ 1.7
EBF1-202ENST00000380654 METP08581 1390 aa25.67■■□□□ 1.7
EBF1-202ENST00000380654 MAP2P11137 1827 aaKnown RBP25.67■■□□□ 1.7
EBF1-202ENST00000380654 ATP7BP35670 1465 aa25.67■■□□□ 1.7
EBF1-202ENST00000380654 CT47B1P0C2W7 299 aaPredicted RBP25.66■■□□□ 1.7
EBF1-202ENST00000380654 TRIM27P14373 513 aa25.66■■□□□ 1.7
EBF1-202ENST00000380654 USP19O94966 1318 aa25.66■■□□□ 1.7
EBF1-202ENST00000380654 TXNDC2Q86VQ3 553 aa25.65■■□□□ 1.7
EBF1-202ENST00000380654 PDZRN3Q9UPQ7 1066 aa25.65■■□□□ 1.7
EBF1-202ENST00000380654 NCKAP5LQ9HCH0 1330 aa25.65■■□□□ 1.7
EBF1-202ENST00000380654 PRKAR2BP31323 418 aa25.64■■□□□ 1.7
EBF1-202ENST00000380654 DAXXQ9UER7 740 aaPredicted RBP25.64■■□□□ 1.7
EBF1-202ENST00000380654 ZRANB1Q9UGI0 708 aa25.64■■□□□ 1.69
EBF1-202ENST00000380654 IL16Q14005 1332 aa25.64■■□□□ 1.69
EBF1-202ENST00000380654 WASLO00401 505 aaPredicted RBP25.63■■□□□ 1.69
EBF1-202ENST00000380654 RSPH6AQ9H0K4 717 aa25.63■■□□□ 1.69
EBF1-202ENST00000380654 FCHSD2O94868 740 aa25.63■■□□□ 1.69
EBF1-202ENST00000380654 EMILIN1Q9Y6C2 1016 aa25.63■■□□□ 1.69
EBF1-202ENST00000380654 PPIP5K1Q6PFW1 1433 aa25.62■■□□□ 1.69
EBF1-202ENST00000380654 HMOX1P09601 288 aa25.62■■□□□ 1.69
EBF1-202ENST00000380654 NME9Q86XW9 330 aa25.62■■□□□ 1.69
EBF1-202ENST00000380654 RWDD1Q9H446 243 aaPredicted RBP25.62■■□□□ 1.69
EBF1-202ENST00000380654 CDC42BPGQ6DT37 1551 aa25.62■■□□□ 1.69
EBF1-202ENST00000380654 NOB1Q9ULX3 412 aaKnown RBP25.62■■□□□ 1.69
EBF1-202ENST00000380654 ZMYM3Q14202 1370 aa25.61■■□□□ 1.69
EBF1-202ENST00000380654 PNNQ9H307 717 aaKnown RBP25.6■■□□□ 1.69
EBF1-202ENST00000380654 CPSF1Q10570 1443 aaKnown RBP25.6■■□□□ 1.69
EBF1-202ENST00000380654 FAM135BQ49AJ0 1406 aa25.6■■□□□ 1.69
EBF1-202ENST00000380654 PHACTR3Q96KR7 559 aa25.6■■□□□ 1.69
EBF1-202ENST00000380654 ATF7IPQ6VMQ6 1270 aa25.59■■□□□ 1.69
EBF1-202ENST00000380654 ITPRIPQ8IWB1 547 aa25.59■■□□□ 1.69
EBF1-202ENST00000380654 ESF1Q9H501 851 aaKnown RBP25.58■■□□□ 1.68
EBF1-202ENST00000380654 USP35Q9P2H5 1018 aa25.58■■□□□ 1.68
EBF1-202ENST00000380654 EDC4Q6P2E9 1401 aaKnown RBP25.57■■□□□ 1.68
EBF1-202ENST00000380654 NUDT16Q96DE0 195 aaKnown RBP25.57■■□□□ 1.68
EBF1-202ENST00000380654 THUMPD2Q9BTF0 503 aaKnown RBP25.57■■□□□ 1.68
EBF1-202ENST00000380654 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.56■■□□□ 1.68
EBF1-202ENST00000380654 TMEM57Q8N5G2 664 aa25.55■■□□□ 1.68
EBF1-202ENST00000380654 KIF13AQ9H1H9 1805 aa25.55■■□□□ 1.68
EBF1-202ENST00000380654 CPS1P31327 1500 aa25.54■■□□□ 1.68
EBF1-202ENST00000380654 NFKBIBQ15653 356 aa25.53■■□□□ 1.68
EBF1-202ENST00000380654 DDX19BQ9UMR2 479 aa25.53■■□□□ 1.68
EBF1-202ENST00000380654 IL13P35225 146 aa25.53■■□□□ 1.68
EBF1-202ENST00000380654 RRS1Q15050 365 aaKnown RBP25.53■■□□□ 1.68
EBF1-202ENST00000380654 NFE2L2Q16236 605 aa25.52■■□□□ 1.68
EBF1-202ENST00000380654 CCDC61Q9Y6R9 512 aa25.51■■□□□ 1.67
EBF1-202ENST00000380654 KNDC1Q76NI1 1749 aa25.5■■□□□ 1.67
EBF1-202ENST00000380654 KIF16BQ96L93 1317 aa25.49■■□□□ 1.67
EBF1-202ENST00000380654 MON2Q7Z3U7 1717 aa25.49■■□□□ 1.67
EBF1-202ENST00000380654 PRR36Q9H6K5 1346 aa25.49■■□□□ 1.67
EBF1-202ENST00000380654 COG3Q96JB2 828 aa25.48■■□□□ 1.67
EBF1-202ENST00000380654 CDK12Q9NYV4 1490 aaPredicted RBP25.48■■□□□ 1.67
EBF1-202ENST00000380654 TNRQ92752 1358 aa25.48■■□□□ 1.67
EBF1-202ENST00000380654 HDAC1Q13547 482 aaPredicted RBP25.47■■□□□ 1.67
EBF1-202ENST00000380654 ZBTB40Q9NUA8 1239 aa25.47■■□□□ 1.67
EBF1-202ENST00000380654 TECPR2O15040 1411 aa25.47■■□□□ 1.67
EBF1-202ENST00000380654 ALDH1L2Q3SY69 923 aa25.47■■□□□ 1.67
EBF1-202ENST00000380654 TSPYL6Q8N831 410 aa25.46■■□□□ 1.67
EBF1-202ENST00000380654 IPO8O15397 1037 aaKnown RBP25.46■■□□□ 1.67
EBF1-202ENST00000380654 ROBO2Q9HCK4 1378 aa25.46■■□□□ 1.67
EBF1-202ENST00000380654 AKAP12Q02952 1782 aa25.45■■□□□ 1.66
EBF1-202ENST00000380654 AATKQ6ZMQ8 1374 aa25.45■■□□□ 1.66
EBF1-202ENST00000380654 DLG5Q8TDM6 1919 aa25.45■■□□□ 1.66
EBF1-202ENST00000380654 UBR1Q8IWV7 1749 aa25.45■■□□□ 1.66
EBF1-202ENST00000380654 ITSN1Q15811 1721 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms