RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 NLRP1Q9C000 1473 aa10.4□□□□□ -0.74
PDLIM5-204ENST00000380176 NGEFQ8N5V2 710 aa10.4□□□□□ -0.74
PDLIM5-204ENST00000380176 TERF2IPQ9NYB0 399 aa10.39□□□□□ -0.75
PDLIM5-204ENST00000380176 U2AF1L5P0DN76 240 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-204ENST00000380176 U2AF1Q01081 240 aaKnown RBP eCLIP10.39□□□□□ -0.75
PDLIM5-204ENST00000380176 NBR1Q14596 966 aa10.39□□□□□ -0.75
PDLIM5-204ENST00000380176 METP08581 1390 aa10.38□□□□□ -0.75
PDLIM5-204ENST00000380176 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-204ENST00000380176 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-204ENST00000380176 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-204ENST00000380176 KIF20BQ96Q89 1820 aa10.38□□□□□ -0.75
PDLIM5-204ENST00000380176 DLC1Q96QB1 1528 aa10.38□□□□□ -0.75
PDLIM5-204ENST00000380176 FBLN1P23142 703 aa10.37□□□□□ -0.75
PDLIM5-204ENST00000380176 KDM2BQ8NHM5 1336 aa10.37□□□□□ -0.75
PDLIM5-204ENST00000380176 COL3A1P02461 1466 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-204ENST00000380176 TCERG1O14776 1098 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-204ENST00000380176 NPM2Q86SE8 214 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-204ENST00000380176 HDGFL2Q7Z4V5 671 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-204ENST00000380176 U2SURPO15042 1029 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-204ENST00000380176 TXNDC2Q86VQ3 553 aa10.36□□□□□ -0.75
PDLIM5-204ENST00000380176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.36□□□□□ -0.75
PDLIM5-204ENST00000380176 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-204ENST00000380176 ADGRB2O60241 1585 aa10.36□□□□□ -0.75
PDLIM5-204ENST00000380176 MED14O60244 1454 aa10.36□□□□□ -0.75
PDLIM5-204ENST00000380176 PLEKHF1Q96S99 279 aa10.35□□□□□ -0.75
PDLIM5-204ENST00000380176 NCKAP5LQ9HCH0 1330 aa10.35□□□□□ -0.75
PDLIM5-204ENST00000380176 PDE4AP27815 886 aa10.35□□□□□ -0.75
PDLIM5-204ENST00000380176 WDR63Q8IWG1 891 aa10.35□□□□□ -0.75
PDLIM5-204ENST00000380176 CCDC27Q2M243 656 aa10.35□□□□□ -0.75
PDLIM5-204ENST00000380176 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-204ENST00000380176 UBR1Q8IWV7 1749 aa10.34□□□□□ -0.75
PDLIM5-204ENST00000380176 TNRQ92752 1358 aa10.34□□□□□ -0.75
PDLIM5-204ENST00000380176 MAP2P11137 1827 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-204ENST00000380176 VASPP50552 380 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-204ENST00000380176 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.34□□□□□ -0.75
PDLIM5-204ENST00000380176 WASLO00401 505 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-204ENST00000380176 ATXN8OSP0DMR3 200 aa10.33□□□□□ -0.76
PDLIM5-204ENST00000380176 RARSP54136 660 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-204ENST00000380176 PANK1Q8TE04 598 aa10.33□□□□□ -0.76
PDLIM5-204ENST00000380176 BACH2Q9BYV9 841 aa10.33□□□□□ -0.76
PDLIM5-204ENST00000380176 BCL2L13Q9BXK5 485 aa10.33□□□□□ -0.76
PDLIM5-204ENST00000380176 TNNQ9UQP3 1299 aa10.33□□□□□ -0.76
PDLIM5-204ENST00000380176 ATP7BP35670 1465 aa10.33□□□□□ -0.76
PDLIM5-204ENST00000380176 PAK3O75914 559 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 MS4A1P11836 297 aa10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 CEBPAP49715 358 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 CENPQQ7L2Z9 268 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 FRAT1Q92837 279 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 PPIP5K1Q6PFW1 1433 aa10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 BBXQ8WY36 941 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 COG6Q9Y2V7 657 aa10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 PNPLA6Q8IY17 1366 aa10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 DIAPH1O60610 1272 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 TMPOP42166 694 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 TRIM35Q9UPQ4 493 aa10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 KNDC1Q76NI1 1749 aa10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 TMEM2Q9UHN6 1383 aa10.32□□□□□ -0.76
PDLIM5-204ENST00000380176 CPSF1Q10570 1443 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-204ENST00000380176 PPM1GO15355 546 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-204ENST00000380176 TSR2Q969E8 191 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-204ENST00000380176 POLKQ9UBT6 870 aa10.31□□□□□ -0.76
PDLIM5-204ENST00000380176 CANXP27824 592 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-204ENST00000380176 PDE3AQ14432 1141 aa10.31□□□□□ -0.76
PDLIM5-204ENST00000380176 NUDT16Q96DE0 195 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-204ENST00000380176 IGHDP01880 384 aa10.3□□□□□ -0.76
PDLIM5-204ENST00000380176 LTKP29376 864 aa10.3□□□□□ -0.76
PDLIM5-204ENST00000380176 ANP32AP39687 249 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-204ENST00000380176 NME9Q86XW9 330 aa10.3□□□□□ -0.76
PDLIM5-204ENST00000380176 RLBP1P12271 317 aa10.3□□□□□ -0.76
PDLIM5-204ENST00000380176 ROBO2Q9HCK4 1378 aa10.3□□□□□ -0.76
PDLIM5-204ENST00000380176 UBE2Q2Q8WVN8 375 aa10.3□□□□□ -0.76
PDLIM5-204ENST00000380176 IPO9Q96P70 1041 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-204ENST00000380176 CPS1P31327 1500 aa10.29□□□□□ -0.76
PDLIM5-204ENST00000380176 TECPR2O15040 1411 aa10.29□□□□□ -0.76
PDLIM5-204ENST00000380176 FAM135BQ49AJ0 1406 aa10.29□□□□□ -0.76
PDLIM5-204ENST00000380176 ADAMTS13Q76LX8 1427 aa10.29□□□□□ -0.76
PDLIM5-204ENST00000380176 MYH16Q9H6N6 1097 aa10.29□□□□□ -0.76
PDLIM5-204ENST00000380176 NOP58Q9Y2X3 529 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-204ENST00000380176 EMILIN1Q9Y6C2 1016 aa10.29□□□□□ -0.76
PDLIM5-204ENST00000380176 MAPK8IP3Q9UPT6 1336 aa10.29□□□□□ -0.76
PDLIM5-204ENST00000380176 HDGFP51858 240 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-204ENST00000380176 PRR36Q9H6K5 1346 aa10.29□□□□□ -0.76
PDLIM5-204ENST00000380176 TRHP20396 242 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-204ENST00000380176 RIPK4P57078 832 aa10.28□□□□□ -0.76
PDLIM5-204ENST00000380176 MON2Q7Z3U7 1717 aa10.28□□□□□ -0.76
PDLIM5-204ENST00000380176 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.28□□□□□ -0.76
PDLIM5-204ENST00000380176 LRRC7Q96NW7 1537 aa10.28□□□□□ -0.76
PDLIM5-204ENST00000380176 EDC4Q6P2E9 1401 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-204ENST00000380176 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
PDLIM5-204ENST00000380176 CDC42BPGQ6DT37 1551 aa10.28□□□□□ -0.76
PDLIM5-204ENST00000380176 AKAP12Q02952 1782 aa10.28□□□□□ -0.76
PDLIM5-204ENST00000380176 EXOSC9Q06265 439 aaKnown RBP10.27□□□□□ -0.76
PDLIM5-204ENST00000380176 CCDC61Q9Y6R9 512 aa10.27□□□□□ -0.76
PDLIM5-204ENST00000380176 RGS3P49796 1198 aa10.27□□□□□ -0.77
PDLIM5-204ENST00000380176 SIRT1Q96EB6 747 aa10.27□□□□□ -0.77
PDLIM5-204ENST00000380176 ITSN1Q15811 1721 aa10.27□□□□□ -0.77
PDLIM5-204ENST00000380176 NUTM2FA1L443 756 aa10.27□□□□□ -0.77
PDLIM5-204ENST00000380176 HMOX1P09601 288 aa10.27□□□□□ -0.77
PDLIM5-204ENST00000380176 SLC26A8Q96RN1 970 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms