RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 MVPQ14764 893 aaKnown RBP15.56■□□□□ 0.08
RFC3-201ENST00000380071 ZKSCAN2Q63HK3 967 aa15.56■□□□□ 0.08
RFC3-201ENST00000380071 FBLN1P23142 703 aa15.56■□□□□ 0.08
RFC3-201ENST00000380071 VIRMAQ69YN4 1812 aaKnown RBP15.55■□□□□ 0.08
RFC3-201ENST00000380071 NLRP1Q9C000 1473 aa15.55■□□□□ 0.08
RFC3-201ENST00000380071 STAG3Q9UJ98 1225 aa15.55■□□□□ 0.08
RFC3-201ENST00000380071 CYB5RLQ6IPT4 315 aa15.55■□□□□ 0.08
RFC3-201ENST00000380071 DZIP1LQ8IYY4 767 aaKnown RBP15.55■□□□□ 0.08
RFC3-201ENST00000380071 RIPK4P57078 832 aa15.54■□□□□ 0.08
RFC3-201ENST00000380071 FTSJ3Q8IY81 847 aaKnown RBP15.54■□□□□ 0.08
RFC3-201ENST00000380071 RWDD1Q9H446 243 aaPredicted RBP15.54■□□□□ 0.08
RFC3-201ENST00000380071 SMC4Q9NTJ3 1288 aa15.54■□□□□ 0.08
RFC3-201ENST00000380071 DIAPH1O60610 1272 aaKnown RBP15.54■□□□□ 0.08
RFC3-201ENST00000380071 HDGFL2Q7Z4V5 671 aaPredicted RBP15.54■□□□□ 0.08
RFC3-201ENST00000380071 SSH1Q8WYL5 1049 aa15.54■□□□□ 0.08
RFC3-201ENST00000380071 ALKQ9UM73 1620 aa15.54■□□□□ 0.08
RFC3-201ENST00000380071 WAPLQ7Z5K2 1190 aa15.53■□□□□ 0.08
RFC3-201ENST00000380071 TRIM27P14373 513 aa15.53■□□□□ 0.08
RFC3-201ENST00000380071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.52■□□□□ 0.08
RFC3-201ENST00000380071 CT47B1P0C2W7 299 aaPredicted RBP15.52■□□□□ 0.07
RFC3-201ENST00000380071 ARHGEF40Q8TER5 1519 aa15.51■□□□□ 0.07
RFC3-201ENST00000380071 NOB1Q9ULX3 412 aaKnown RBP15.51■□□□□ 0.07
RFC3-201ENST00000380071 CLTCQ00610 1675 aaKnown RBP15.51■□□□□ 0.07
RFC3-201ENST00000380071 MED14O60244 1454 aa15.51■□□□□ 0.07
RFC3-201ENST00000380071 IL27Q8NEV9 243 aa15.51■□□□□ 0.07
RFC3-201ENST00000380071 PNPLA6Q8IY17 1366 aa15.5■□□□□ 0.07
RFC3-201ENST00000380071 FAM69CQ0P6D2 419 aa15.5■□□□□ 0.07
RFC3-201ENST00000380071 ANKRD26Q9UPS8 1709 aa15.5■□□□□ 0.07
RFC3-201ENST00000380071 FRAT2O75474 233 aaPredicted RBP15.49■□□□□ 0.07
RFC3-201ENST00000380071 ATF7IPQ6VMQ6 1270 aa15.49■□□□□ 0.07
RFC3-201ENST00000380071 ITPRIPQ8IWB1 547 aa15.49■□□□□ 0.07
RFC3-201ENST00000380071 IL16Q14005 1332 aa15.48■□□□□ 0.07
RFC3-201ENST00000380071 POLKQ9UBT6 870 aa15.48■□□□□ 0.07
RFC3-201ENST00000380071 GSE1Q14687 1217 aa15.47■□□□□ 0.07
RFC3-201ENST00000380071 TMEM57Q8N5G2 664 aa15.47■□□□□ 0.07
RFC3-201ENST00000380071 FCHSD2O94868 740 aa15.46■□□□□ 0.07
RFC3-201ENST00000380071 PRKAR2BP31323 418 aa15.46■□□□□ 0.07
RFC3-201ENST00000380071 MLECQ14165 292 aa15.46■□□□□ 0.07
RFC3-201ENST00000380071 RSPH6AQ9H0K4 717 aa15.46■□□□□ 0.07
RFC3-201ENST00000380071 PNNQ9H307 717 aaKnown RBP15.46■□□□□ 0.07
RFC3-201ENST00000380071 DDX19BQ9UMR2 479 aa15.46■□□□□ 0.07
RFC3-201ENST00000380071 HMOX1P09601 288 aa15.45■□□□□ 0.06
RFC3-201ENST00000380071 PHACTR3Q96KR7 559 aa15.45■□□□□ 0.06
RFC3-201ENST00000380071 KIF20BQ96Q89 1820 aa15.44■□□□□ 0.06
RFC3-201ENST00000380071 HDAC1Q13547 482 aaPredicted RBP15.44■□□□□ 0.06
RFC3-201ENST00000380071 TBC1D32Q96NH3 1257 aa15.44■□□□□ 0.06
RFC3-201ENST00000380071 A2ML1A8K2U0 1454 aa15.44■□□□□ 0.06
RFC3-201ENST00000380071 ZRANB1Q9UGI0 708 aa15.44■□□□□ 0.06
RFC3-201ENST00000380071 THUMPD2Q9BTF0 503 aaKnown RBP15.43■□□□□ 0.06
RFC3-201ENST00000380071 EMILIN1Q9Y6C2 1016 aa15.43■□□□□ 0.06
RFC3-201ENST00000380071 ZMYM3Q14202 1370 aa15.43■□□□□ 0.06
RFC3-201ENST00000380071 BECN1Q14457 450 aa15.43■□□□□ 0.06
RFC3-201ENST00000380071 UPF2Q9HAU5 1272 aaKnown RBP15.43■□□□□ 0.06
RFC3-201ENST00000380071 ZBTB40Q9NUA8 1239 aa15.43■□□□□ 0.06
RFC3-201ENST00000380071 RIMS2Q9UQ26 1411 aa15.43■□□□□ 0.06
RFC3-201ENST00000380071 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
RFC3-201ENST00000380071 TSPOAP1O95153 1857 aa15.42■□□□□ 0.06
RFC3-201ENST00000380071 SLKQ9H2G2 1235 aaPredicted RBP15.42■□□□□ 0.06
RFC3-201ENST00000380071 NCKAP5LQ9HCH0 1330 aa15.42■□□□□ 0.06
RFC3-201ENST00000380071 NME9Q86XW9 330 aa15.42■□□□□ 0.06
RFC3-201ENST00000380071 FAM135BQ49AJ0 1406 aa15.41■□□□□ 0.06
RFC3-201ENST00000380071 MAP2P11137 1827 aaKnown RBP15.41■□□□□ 0.06
RFC3-201ENST00000380071 IPO8O15397 1037 aaKnown RBP15.41■□□□□ 0.06
RFC3-201ENST00000380071 TXNDC2Q86VQ3 553 aa15.41■□□□□ 0.06
RFC3-201ENST00000380071 RTN4Q9NQC3 1192 aaKnown RBP15.41■□□□□ 0.06
RFC3-201ENST00000380071 WASLO00401 505 aaPredicted RBP15.4■□□□□ 0.06
RFC3-201ENST00000380071 ALDH1L2Q3SY69 923 aa15.4■□□□□ 0.06
RFC3-201ENST00000380071 SMC5Q8IY18 1101 aa15.4■□□□□ 0.06
RFC3-201ENST00000380071 TBC1D2Q9BYX2 928 aa15.4■□□□□ 0.06
RFC3-201ENST00000380071 PPP6R1Q9UPN7 881 aa15.4■□□□□ 0.06
RFC3-201ENST00000380071 KIF16BQ96L93 1317 aa15.4■□□□□ 0.06
RFC3-201ENST00000380071 NFE2L2Q16236 605 aa15.39■□□□□ 0.05
RFC3-201ENST00000380071 DLC1Q96QB1 1528 aa15.39■□□□□ 0.05
RFC3-201ENST00000380071 ATP7BP35670 1465 aa15.39■□□□□ 0.05
RFC3-201ENST00000380071 IL13P35225 146 aa15.39■□□□□ 0.05
RFC3-201ENST00000380071 TSPYL6Q8N831 410 aa15.39■□□□□ 0.05
RFC3-201ENST00000380071 METP08581 1390 aa15.39■□□□□ 0.05
RFC3-201ENST00000380071 CDC42BPGQ6DT37 1551 aa15.39■□□□□ 0.05
RFC3-201ENST00000380071 SETD1AO15047 1707 aaKnown RBP15.38■□□□□ 0.05
RFC3-201ENST00000380071 ELL2O00472 640 aaPredicted RBP15.38■□□□□ 0.05
RFC3-201ENST00000380071 VAMP4O75379 141 aa15.38■□□□□ 0.05
RFC3-201ENST00000380071 PPIP5K1Q6PFW1 1433 aa15.38■□□□□ 0.05
RFC3-201ENST00000380071 MFAP1P55081 439 aaKnown RBP15.37■□□□□ 0.05
RFC3-201ENST00000380071 CPSF1Q10570 1443 aaKnown RBP15.37■□□□□ 0.05
RFC3-201ENST00000380071 SPATA31D1Q6ZQQ2 1576 aa15.37■□□□□ 0.05
RFC3-201ENST00000380071 ANTXR1Q9H6X2 564 aa15.37■□□□□ 0.05
RFC3-201ENST00000380071 RIMBP3CA6NJZ7 1639 aa15.37■□□□□ 0.05
RFC3-201ENST00000380071 RIMBP3BA6NNM3 1639 aa15.37■□□□□ 0.05
RFC3-201ENST00000380071 RIMBP3Q9UFD9 1639 aa15.37■□□□□ 0.05
RFC3-201ENST00000380071 DIP2BQ9P265 1576 aa15.37■□□□□ 0.05
RFC3-201ENST00000380071 RRS1Q15050 365 aaKnown RBP15.37■□□□□ 0.05
RFC3-201ENST00000380071 NUDT16Q96DE0 195 aaKnown RBP15.37■□□□□ 0.05
RFC3-201ENST00000380071 AGLP35573 1532 aa15.36■□□□□ 0.05
RFC3-201ENST00000380071 MRPL50Q8N5N7 158 aaKnown RBP15.36■□□□□ 0.05
RFC3-201ENST00000380071 C22orf23Q9BZE7 217 aa15.36■□□□□ 0.05
RFC3-201ENST00000380071 BRPF3Q9ULD4 1205 aa15.36■□□□□ 0.05
RFC3-201ENST00000380071 SPRYD3Q8NCJ5 442 aa15.35■□□□□ 0.05
RFC3-201ENST00000380071 EDC4Q6P2E9 1401 aaKnown RBP15.35■□□□□ 0.05
RFC3-201ENST00000380071 BRPF1P55201 1214 aaPredicted RBP15.35■□□□□ 0.05
RFC3-201ENST00000380071 NUCB1Q02818 461 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms