RNA–Protein interactions for RNA: ENST00000379205.4

C4orf46-201, Transcript of chromosome 4 open reading frame 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4orf46, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-201ENST00000379205 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
C4orf46-201ENST00000379205 HDAC1Q13547 482 aaPredicted RBP12.12□□□□□ -0.47
C4orf46-201ENST00000379205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.12□□□□□ -0.47
C4orf46-201ENST00000379205 SPC24Q8NBT2 197 aa12.12□□□□□ -0.47
C4orf46-201ENST00000379205 WDR7Q9Y4E6 1490 aa12.12□□□□□ -0.47
C4orf46-201ENST00000379205 LARP6Q9BRS8 491 aaKnown RBP12.11□□□□□ -0.47
C4orf46-201ENST00000379205 ZBTB40Q9NUA8 1239 aa12.11□□□□□ -0.47
C4orf46-201ENST00000379205 SASS6Q6UVJ0 657 aa12.11□□□□□ -0.47
C4orf46-201ENST00000379205 USP25Q9UHP3 1055 aa12.11□□□□□ -0.47
C4orf46-201ENST00000379205 NOL7Q9UMY1 257 aaKnown RBP12.11□□□□□ -0.47
C4orf46-201ENST00000379205 TMEM63CQ9P1W3 806 aa12.11□□□□□ -0.47
C4orf46-201ENST00000379205 FAM135AQ9P2D6 1515 aa12.11□□□□□ -0.47
C4orf46-201ENST00000379205 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
C4orf46-201ENST00000379205 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
C4orf46-201ENST00000379205 LMBRD1Q9NUN5 540 aa12.1□□□□□ -0.47
C4orf46-201ENST00000379205 BMP2KLQ5H9B9 411 aa12.1□□□□□ -0.47
C4orf46-201ENST00000379205 TSHZ3Q63HK5 1081 aa12.1□□□□□ -0.47
C4orf46-201ENST00000379205 PIK3C2GO75747 1445 aa12.1□□□□□ -0.47
C4orf46-201ENST00000379205 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
C4orf46-201ENST00000379205 ZNF771Q7L3S4 317 aaPredicted RBP12.09□□□□□ -0.47
C4orf46-201ENST00000379205 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
C4orf46-201ENST00000379205 RABEP1Q15276 862 aa12.09□□□□□ -0.47
C4orf46-201ENST00000379205 CCDC27Q2M243 656 aa12.09□□□□□ -0.47
C4orf46-201ENST00000379205 GPT2Q8TD30 523 aa12.09□□□□□ -0.47
C4orf46-201ENST00000379205 RILPL2Q969X0 211 aa12.09□□□□□ -0.47
C4orf46-201ENST00000379205 KIF2CQ99661 725 aa12.09□□□□□ -0.47
C4orf46-201ENST00000379205 CARMIL2Q6F5E8 1435 aa12.09□□□□□ -0.47
C4orf46-201ENST00000379205 DYNC1I1O14576 645 aa12.08□□□□□ -0.47
C4orf46-201ENST00000379205 PRDM4Q9UKN5 801 aa12.08□□□□□ -0.47
C4orf46-201ENST00000379205 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.08□□□□□ -0.47
C4orf46-201ENST00000379205 SOX12O15370 315 aa12.08□□□□□ -0.48
C4orf46-201ENST00000379205 UPF3BQ9BZI7 483 aaKnown RBP12.08□□□□□ -0.48
C4orf46-201ENST00000379205 TSPY26PQ9H489 355 aa12.08□□□□□ -0.48
C4orf46-201ENST00000379205 GGT6Q6P531 493 aa12.08□□□□□ -0.48
C4orf46-201ENST00000379205 DRC7Q8IY82 874 aa12.08□□□□□ -0.48
C4orf46-201ENST00000379205 AK9Q5TCS8 1911 aa12.07□□□□□ -0.48
C4orf46-201ENST00000379205 CHAF1AQ13111 956 aaPredicted RBP12.07□□□□□ -0.48
C4orf46-201ENST00000379205 TSPYL6Q8N831 410 aa12.07□□□□□ -0.48
C4orf46-201ENST00000379205 PLA2R1Q13018 1463 aa12.07□□□□□ -0.48
C4orf46-201ENST00000379205 RSPH4AQ5TD94 716 aa12.07□□□□□ -0.48
C4orf46-201ENST00000379205 ANO2Q9NQ90 1003 aa12.06□□□□□ -0.48
C4orf46-201ENST00000379205 PRKAR2BP31323 418 aa12.06□□□□□ -0.48
C4orf46-201ENST00000379205 ZNF592Q92610 1267 aa12.06□□□□□ -0.48
C4orf46-201ENST00000379205 SPAG9O60271 1321 aaKnown RBP12.06□□□□□ -0.48
C4orf46-201ENST00000379205 PDE4CQ08493 712 aa12.06□□□□□ -0.48
C4orf46-201ENST00000379205 LRSAM1Q6UWE0 723 aa12.06□□□□□ -0.48
C4orf46-201ENST00000379205 DCTN1Q14203 1278 aa12.05□□□□□ -0.48
C4orf46-201ENST00000379205 INTS3Q68E01 1043 aaKnown RBP12.05□□□□□ -0.48
C4orf46-201ENST00000379205 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
C4orf46-201ENST00000379205 KDM5DQ9BY66 1539 aa12.05□□□□□ -0.48
C4orf46-201ENST00000379205 ADGRL2O95490 1459 aa12.05□□□□□ -0.48
C4orf46-201ENST00000379205 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
C4orf46-201ENST00000379205 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
C4orf46-201ENST00000379205 ZNF445P59923 1031 aa12.04□□□□□ -0.48
C4orf46-201ENST00000379205 NPHP1O15259 732 aa12.04□□□□□ -0.48
C4orf46-201ENST00000379205 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
C4orf46-201ENST00000379205 MTERF4Q7Z6M4 381 aaKnown RBP12.04□□□□□ -0.48
C4orf46-201ENST00000379205 GCC1Q96CN9 775 aa12.04□□□□□ -0.48
C4orf46-201ENST00000379205 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
C4orf46-201ENST00000379205 CGNQ9P2M7 1197 aaKnown RBP12.04□□□□□ -0.48
C4orf46-201ENST00000379205 FIBPO43427 364 aa12.04□□□□□ -0.48
C4orf46-201ENST00000379205 HCLS1P14317 486 aaPredicted RBP12.04□□□□□ -0.48
C4orf46-201ENST00000379205 DDIT3P35638 169 aa12.04□□□□□ -0.48
C4orf46-201ENST00000379205 SYAP1Q96A49 352 aaPredicted RBP12.04□□□□□ -0.48
C4orf46-201ENST00000379205 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
C4orf46-201ENST00000379205 ADAMTS12P58397 1594 aa12.03□□□□□ -0.48
C4orf46-201ENST00000379205 CCDC94Q9BW85 323 aaPredicted RBP12.03□□□□□ -0.48
C4orf46-201ENST00000379205 KIF3AQ9Y496 699 aa12.03□□□□□ -0.48
C4orf46-201ENST00000379205 DISP1Q96F81 1524 aa12.03□□□□□ -0.48
C4orf46-201ENST00000379205 SCAF11Q99590 1463 aaKnown RBP12.03□□□□□ -0.48
C4orf46-201ENST00000379205 ZNF500O60304 480 aaPredicted RBP12.03□□□□□ -0.48
C4orf46-201ENST00000379205 GSPT1P15170 499 aaKnown RBP12.03□□□□□ -0.48
C4orf46-201ENST00000379205 SMAP1Q8IYB5 467 aaPredicted RBP12.03□□□□□ -0.48
C4orf46-201ENST00000379205 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
C4orf46-201ENST00000379205 RAPGEF6Q8TEU7 1601 aa12.03□□□□□ -0.48
C4orf46-201ENST00000379205 GADD45BO75293 160 aaPredicted RBP12.03□□□□□ -0.48
C4orf46-201ENST00000379205 NOLC1Q14978 699 aaKnown RBP eCLIP12.03□□□□□ -0.48
C4orf46-201ENST00000379205 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
C4orf46-201ENST00000379205 PDCL2Q8N4E4 241 aa12.03□□□□□ -0.48
C4orf46-201ENST00000379205 VGLL3A8MV65 326 aa12.02□□□□□ -0.48
C4orf46-201ENST00000379205 ADCY5O95622 1261 aa12.02□□□□□ -0.48
C4orf46-201ENST00000379205 NECTIN2Q92692 538 aa12.02□□□□□ -0.48
C4orf46-201ENST00000379205 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.48
C4orf46-201ENST00000379205 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
C4orf46-201ENST00000379205 SDSP20132 328 aa12.02□□□□□ -0.49
C4orf46-201ENST00000379205 U2AF2P26368 475 aaKnown RBP eCLIP12.02□□□□□ -0.49
C4orf46-201ENST00000379205 TRERF1Q96PN7 1200 aa12.02□□□□□ -0.49
C4orf46-201ENST00000379205 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
C4orf46-201ENST00000379205 ZBTB7BO15156 539 aaPredicted RBP12.01□□□□□ -0.49
C4orf46-201ENST00000379205 REC8O95072 547 aa12.01□□□□□ -0.49
C4orf46-201ENST00000379205 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
C4orf46-201ENST00000379205 TWISTNBQ3B726 338 aaPredicted RBP12.01□□□□□ -0.49
C4orf46-201ENST00000379205 PLEKHM2Q8IWE5 1019 aa12.01□□□□□ -0.49
C4orf46-201ENST00000379205 DDX54Q8TDD1 881 aaKnown RBP12.01□□□□□ -0.49
C4orf46-201ENST00000379205 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
C4orf46-201ENST00000379205 USP26Q9BXU7 913 aa12□□□□□ -0.49
C4orf46-201ENST00000379205 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
C4orf46-201ENST00000379205 TRPM1Q7Z4N2 1603 aa12□□□□□ -0.49
C4orf46-201ENST00000379205 FAM83GA6ND36 823 aa12□□□□□ -0.49
C4orf46-201ENST00000379205 MBD3O95983 291 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 328.3 ms