RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 ATP10AO60312 1499 aa16.24■□□□□ 0.19
CUL4A-203ENST00000375441 PREX2Q70Z35 1606 aa16.23■□□□□ 0.19
CUL4A-203ENST00000375441 TTC37Q6PGP7 1564 aa16.23■□□□□ 0.19
CUL4A-203ENST00000375441 TRIM6-TRIM34B2RNG4 842 aa16.23■□□□□ 0.19
CUL4A-203ENST00000375441 ATAD2Q6PL18 1390 aa16.23■□□□□ 0.19
CUL4A-203ENST00000375441 IDI1Q13907 227 aa16.23■□□□□ 0.19
CUL4A-203ENST00000375441 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
CUL4A-203ENST00000375441 SLC52A1Q9NWF4 448 aa16.23■□□□□ 0.19
CUL4A-203ENST00000375441 FBLN1P23142 703 aa16.22■□□□□ 0.19
CUL4A-203ENST00000375441 PLCB2Q00722 1185 aa16.22■□□□□ 0.19
CUL4A-203ENST00000375441 ABCC11Q96J66 1382 aa16.22■□□□□ 0.19
CUL4A-203ENST00000375441 K7ELQ4 463 aaPredicted RBP16.22■□□□□ 0.19
CUL4A-203ENST00000375441 HDGFP51858 240 aaKnown RBP16.22■□□□□ 0.19
CUL4A-203ENST00000375441 STK31Q9BXU1 1019 aa16.22■□□□□ 0.19
CUL4A-203ENST00000375441 HSP90AA2PQ14568 343 aaPredicted RBP16.22■□□□□ 0.19
CUL4A-203ENST00000375441 INTS3Q68E01 1043 aaKnown RBP16.22■□□□□ 0.19
CUL4A-203ENST00000375441 NSD2O96028 1365 aa16.21■□□□□ 0.19
CUL4A-203ENST00000375441 ANKRD36BQ8N2N9 1353 aa16.21■□□□□ 0.19
CUL4A-203ENST00000375441 XRCC6P12956 609 aaKnown RBP eCLIP16.21■□□□□ 0.19
CUL4A-203ENST00000375441 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
CUL4A-203ENST00000375441 FYB1O15117 783 aa16.2■□□□□ 0.18
CUL4A-203ENST00000375441 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
CUL4A-203ENST00000375441 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
CUL4A-203ENST00000375441 PANK2Q9BZ23 570 aa16.2■□□□□ 0.18
CUL4A-203ENST00000375441 PTPRTO14522 1441 aa16.2■□□□□ 0.18
CUL4A-203ENST00000375441 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
CUL4A-203ENST00000375441 SYNMO15061 1565 aa16.2■□□□□ 0.18
CUL4A-203ENST00000375441 REC8O95072 547 aa16.2■□□□□ 0.18
CUL4A-203ENST00000375441 NUCB2P80303 420 aa16.2■□□□□ 0.18
CUL4A-203ENST00000375441 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
CUL4A-203ENST00000375441 ERVK-7P63135 1459 aa16.2■□□□□ 0.18
CUL4A-203ENST00000375441 TNPO1Q92973 898 aaKnown RBP16.19■□□□□ 0.18
CUL4A-203ENST00000375441 FOXD4L6Q3SYB3 417 aaPredicted RBP16.19■□□□□ 0.18
CUL4A-203ENST00000375441 FOXD4L3Q6VB84 417 aaPredicted RBP16.19■□□□□ 0.18
CUL4A-203ENST00000375441 NASPP49321 788 aaPredicted RBP16.19■□□□□ 0.18
CUL4A-203ENST00000375441 RILPL2Q969X0 211 aa16.19■□□□□ 0.18
CUL4A-203ENST00000375441 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
CUL4A-203ENST00000375441 NUCB1Q02818 461 aa16.18■□□□□ 0.18
CUL4A-203ENST00000375441 SMC5Q8IY18 1101 aa16.18■□□□□ 0.18
CUL4A-203ENST00000375441 USP19O94966 1318 aa16.17■□□□□ 0.18
CUL4A-203ENST00000375441 IL16Q14005 1332 aa16.17■□□□□ 0.18
CUL4A-203ENST00000375441 ZBTB40Q9NUA8 1239 aa16.17■□□□□ 0.18
CUL4A-203ENST00000375441 IQGAP3Q86VI3 1631 aa16.17■□□□□ 0.18
CUL4A-203ENST00000375441 RRS1Q15050 365 aaKnown RBP16.16■□□□□ 0.18
CUL4A-203ENST00000375441 RABEP1Q15276 862 aa16.16■□□□□ 0.18
CUL4A-203ENST00000375441 BMP2KLQ5H9B9 411 aa16.16■□□□□ 0.18
CUL4A-203ENST00000375441 WAPLQ7Z5K2 1190 aa16.16■□□□□ 0.18
CUL4A-203ENST00000375441 ESPNB1AK53 854 aa16.16■□□□□ 0.18
CUL4A-203ENST00000375441 DCTN1Q14203 1278 aa16.16■□□□□ 0.18
CUL4A-203ENST00000375441 CAVIN1Q6NZI2 390 aaKnown RBP16.16■□□□□ 0.18
CUL4A-203ENST00000375441 ISY1Q9ULR0 285 aaKnown RBP16.16■□□□□ 0.18
CUL4A-203ENST00000375441 MYO5CQ9NQX4 1742 aa16.16■□□□□ 0.18
CUL4A-203ENST00000375441 KDM5AP29375 1690 aaKnown RBP16.16■□□□□ 0.18
CUL4A-203ENST00000375441 EMILIN1Q9Y6C2 1016 aa16.16■□□□□ 0.18
CUL4A-203ENST00000375441 TBC1D9Q6ZT07 1266 aa16.15■□□□□ 0.18
CUL4A-203ENST00000375441 UNC13BO14795 1591 aa16.15■□□□□ 0.18
CUL4A-203ENST00000375441 NECTIN2Q92692 538 aa16.15■□□□□ 0.18
CUL4A-203ENST00000375441 CD109Q6YHK3 1445 aa16.14■□□□□ 0.17
CUL4A-203ENST00000375441 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
CUL4A-203ENST00000375441 TRPM2O94759 1503 aa16.14■□□□□ 0.17
CUL4A-203ENST00000375441 CDC42BPBQ9Y5S2 1711 aa16.14■□□□□ 0.17
CUL4A-203ENST00000375441 AMPHP49418 695 aa16.14■□□□□ 0.17
CUL4A-203ENST00000375441 UGGT1Q9NYU2 1555 aa16.13■□□□□ 0.17
CUL4A-203ENST00000375441 SSFA2P28290 1259 aa16.13■□□□□ 0.17
CUL4A-203ENST00000375441 SULT6B1Q6IMI4 303 aa16.13■□□□□ 0.17
CUL4A-203ENST00000375441 TXNDC2Q86VQ3 553 aa16.13■□□□□ 0.17
CUL4A-203ENST00000375441 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.13■□□□□ 0.17
CUL4A-203ENST00000375441 ATP7AQ04656 1500 aa16.13■□□□□ 0.17
CUL4A-203ENST00000375441 KCNJ4P48050 445 aa16.12■□□□□ 0.17
CUL4A-203ENST00000375441 KIAA1211Q6ZU35 1233 aa16.12■□□□□ 0.17
CUL4A-203ENST00000375441 SYAP1Q96A49 352 aaPredicted RBP16.12■□□□□ 0.17
CUL4A-203ENST00000375441 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
CUL4A-203ENST00000375441 A0A1W2PP64 1363 aa16.12■□□□□ 0.17
CUL4A-203ENST00000375441 PRPF40AO75400 957 aaKnown RBP16.12■□□□□ 0.17
CUL4A-203ENST00000375441 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
CUL4A-203ENST00000375441 NME9Q86XW9 330 aa16.12■□□□□ 0.17
CUL4A-203ENST00000375441 PUS7Q96PZ0 661 aaKnown RBP16.12■□□□□ 0.17
CUL4A-203ENST00000375441 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
CUL4A-203ENST00000375441 SBNO2Q9Y2G9 1366 aa16.11■□□□□ 0.17
CUL4A-203ENST00000375441 LMOD2Q6P5Q4 547 aa16.11■□□□□ 0.17
CUL4A-203ENST00000375441 RRAGDQ9NQL2 400 aaPredicted RBP16.11■□□□□ 0.17
CUL4A-203ENST00000375441 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
CUL4A-203ENST00000375441 FBXO31Q5XUX0 539 aaPredicted RBP16.11■□□□□ 0.17
CUL4A-203ENST00000375441 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
CUL4A-203ENST00000375441 ARID3AQ99856 593 aa16.11■□□□□ 0.17
CUL4A-203ENST00000375441 PLXNC1O60486 1568 aa16.11■□□□□ 0.17
CUL4A-203ENST00000375441 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
CUL4A-203ENST00000375441 MBIPQ9NS73 344 aa16.1■□□□□ 0.17
CUL4A-203ENST00000375441 E9PCH4 1651 aa16.1■□□□□ 0.17
CUL4A-203ENST00000375441 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
CUL4A-203ENST00000375441 NEK4P51957 841 aa16.1■□□□□ 0.17
CUL4A-203ENST00000375441 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
CUL4A-203ENST00000375441 FKBP5Q13451 457 aaPredicted RBP16.1■□□□□ 0.17
CUL4A-203ENST00000375441 FAM83GA6ND36 823 aa16.1■□□□□ 0.17
CUL4A-203ENST00000375441 ANTXR1Q9H6X2 564 aa16.1■□□□□ 0.17
CUL4A-203ENST00000375441 SMARCA5O60264 1052 aaPredicted RBP16.09■□□□□ 0.17
CUL4A-203ENST00000375441 SNX21Q969T3 373 aa16.09■□□□□ 0.17
CUL4A-203ENST00000375441 ASXL2Q76L83 1435 aa16.09■□□□□ 0.17
CUL4A-203ENST00000375441 ABCC1P33527 1531 aa16.09■□□□□ 0.17
CUL4A-203ENST00000375441 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms