RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 CALD1Q05682 793 aaKnown RBP21.92■■□□□ 1.1
LDLRAP1-201ENST00000374338 SBNO2Q9Y2G9 1366 aa21.92■■□□□ 1.1
LDLRAP1-201ENST00000374338 PCDHB15Q9Y5E8 787 aa21.91■■□□□ 1.1
LDLRAP1-201ENST00000374338 CAMSAP1Q5T5Y3 1602 aa21.91■■□□□ 1.1
LDLRAP1-201ENST00000374338 DIP2CQ9Y2E4 1556 aa21.9■■□□□ 1.1
LDLRAP1-201ENST00000374338 TSPOAP1O95153 1857 aa21.9■■□□□ 1.1
LDLRAP1-201ENST00000374338 HMOX1P09601 288 aa21.9■■□□□ 1.1
LDLRAP1-201ENST00000374338 THUMPD2Q9BTF0 503 aaKnown RBP21.9■■□□□ 1.1
LDLRAP1-201ENST00000374338 MYO5BQ9ULV0 1848 aa21.89■■□□□ 1.1
LDLRAP1-201ENST00000374338 EXOSC9Q06265 439 aaKnown RBP21.89■■□□□ 1.09
LDLRAP1-201ENST00000374338 NEXMIFQ5QGS0 1516 aa21.88■■□□□ 1.09
LDLRAP1-201ENST00000374338 ANKRD36BQ8N2N9 1353 aa21.88■■□□□ 1.09
LDLRAP1-201ENST00000374338 SLC52A1Q9NWF4 448 aa21.88■■□□□ 1.09
LDLRAP1-201ENST00000374338 ESPNB1AK53 854 aa21.87■■□□□ 1.09
LDLRAP1-201ENST00000374338 TPM2P07951 284 aa21.87■■□□□ 1.09
LDLRAP1-201ENST00000374338 TXNDC2Q86VQ3 553 aa21.86■■□□□ 1.09
LDLRAP1-201ENST00000374338 ELL2O00472 640 aaPredicted RBP21.86■■□□□ 1.09
LDLRAP1-201ENST00000374338 ERBB4Q15303 1308 aa21.86■■□□□ 1.09
LDLRAP1-201ENST00000374338 SOX12O15370 315 aa21.86■■□□□ 1.09
LDLRAP1-201ENST00000374338 ANTXR1Q9H6X2 564 aa21.85■■□□□ 1.09
LDLRAP1-201ENST00000374338 SETBP1Q9Y6X0 1596 aa21.85■■□□□ 1.09
LDLRAP1-201ENST00000374338 RIPK4P57078 832 aa21.84■■□□□ 1.09
LDLRAP1-201ENST00000374338 SHPRHQ149N8 1683 aa21.84■■□□□ 1.09
LDLRAP1-201ENST00000374338 PIK3C2BO00750 1634 aa21.84■■□□□ 1.09
LDLRAP1-201ENST00000374338 BECN1Q14457 450 aa21.83■■□□□ 1.09
LDLRAP1-201ENST00000374338 TMPOP42166 694 aaKnown RBP21.83■■□□□ 1.09
LDLRAP1-201ENST00000374338 FGD1P98174 961 aa21.83■■□□□ 1.09
LDLRAP1-201ENST00000374338 SMC4Q9NTJ3 1288 aa21.83■■□□□ 1.09
LDLRAP1-201ENST00000374338 MAPK8IP3Q9UPT6 1336 aa21.83■■□□□ 1.08
LDLRAP1-201ENST00000374338 MYO3AQ8NEV4 1616 aa21.83■■□□□ 1.08
LDLRAP1-201ENST00000374338 TERF2IPQ9NYB0 399 aa21.82■■□□□ 1.08
LDLRAP1-201ENST00000374338 TRIM35Q9UPQ4 493 aa21.82■■□□□ 1.08
LDLRAP1-201ENST00000374338 NEO1Q92859 1461 aa21.81■■□□□ 1.08
LDLRAP1-201ENST00000374338 EMILIN1Q9Y6C2 1016 aa21.81■■□□□ 1.08
LDLRAP1-201ENST00000374338 FTSJ3Q8IY81 847 aaKnown RBP21.81■■□□□ 1.08
LDLRAP1-201ENST00000374338 NEURL4Q96JN8 1562 aa21.81■■□□□ 1.08
LDLRAP1-201ENST00000374338 YTHDC2Q9H6S0 1430 aaKnown RBP21.81■■□□□ 1.08
LDLRAP1-201ENST00000374338 ARHGEF28Q8N1W1 1705 aaKnown RBP21.81■■□□□ 1.08
LDLRAP1-201ENST00000374338 MRE11P49959 708 aa21.79■■□□□ 1.08
LDLRAP1-201ENST00000374338 PDE3AQ14432 1141 aa21.79■■□□□ 1.08
LDLRAP1-201ENST00000374338 NME9Q86XW9 330 aa21.79■■□□□ 1.08
LDLRAP1-201ENST00000374338 ZC3H13Q5T200 1668 aaKnown RBP21.79■■□□□ 1.08
LDLRAP1-201ENST00000374338 RRS1Q15050 365 aaKnown RBP21.79■■□□□ 1.08
LDLRAP1-201ENST00000374338 HDGFL2Q7Z4V5 671 aaPredicted RBP21.79■■□□□ 1.08
LDLRAP1-201ENST00000374338 SSH1Q8WYL5 1049 aa21.79■■□□□ 1.08
LDLRAP1-201ENST00000374338 MYH16Q9H6N6 1097 aa21.79■■□□□ 1.08
LDLRAP1-201ENST00000374338 PLEKHF1Q96S99 279 aa21.79■■□□□ 1.08
LDLRAP1-201ENST00000374338 DIAPH1O60610 1272 aaKnown RBP21.78■■□□□ 1.08
LDLRAP1-201ENST00000374338 WDR63Q8IWG1 891 aa21.78■■□□□ 1.08
LDLRAP1-201ENST00000374338 PHACTR3Q96KR7 559 aa21.78■■□□□ 1.08
LDLRAP1-201ENST00000374338 TBC1D2Q9BYX2 928 aa21.78■■□□□ 1.08
LDLRAP1-201ENST00000374338 CFAP74Q9C0B2 1584 aa21.78■■□□□ 1.08
LDLRAP1-201ENST00000374338 PRKAR2BP31323 418 aa21.77■■□□□ 1.08
LDLRAP1-201ENST00000374338 ITPRIPQ8IWB1 547 aa21.77■■□□□ 1.08
LDLRAP1-201ENST00000374338 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
LDLRAP1-201ENST00000374338 NOB1Q9ULX3 412 aaKnown RBP21.76■■□□□ 1.07
LDLRAP1-201ENST00000374338 PDZRN3Q9UPQ7 1066 aa21.76■■□□□ 1.07
LDLRAP1-201ENST00000374338 RICTORQ6R327 1708 aa21.75■■□□□ 1.07
LDLRAP1-201ENST00000374338 MCM4P33991 863 aa21.75■■□□□ 1.07
LDLRAP1-201ENST00000374338 PTPRMP28827 1452 aa21.75■■□□□ 1.07
LDLRAP1-201ENST00000374338 ABCC11Q96J66 1382 aa21.75■■□□□ 1.07
LDLRAP1-201ENST00000374338 IQSEC2Q5JU85 1478 aa21.74■■□□□ 1.07
LDLRAP1-201ENST00000374338 TRIM27P14373 513 aa21.73■■□□□ 1.07
LDLRAP1-201ENST00000374338 DCTN1Q14203 1278 aa21.73■■□□□ 1.07
LDLRAP1-201ENST00000374338 ESF1Q9H501 851 aaKnown RBP21.73■■□□□ 1.07
LDLRAP1-201ENST00000374338 GRPEL1Q9HAV7 217 aa21.73■■□□□ 1.07
LDLRAP1-201ENST00000374338 POLKQ9UBT6 870 aa21.73■■□□□ 1.07
LDLRAP1-201ENST00000374338 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
LDLRAP1-201ENST00000374338 KIAA1211Q6ZU35 1233 aa21.72■■□□□ 1.07
LDLRAP1-201ENST00000374338 DZIP1LQ8IYY4 767 aaKnown RBP21.72■■□□□ 1.07
LDLRAP1-201ENST00000374338 CD163L1Q9NR16 1453 aa21.72■■□□□ 1.07
LDLRAP1-201ENST00000374338 FAM83GA6ND36 823 aa21.72■■□□□ 1.07
LDLRAP1-201ENST00000374338 ZKSCAN2Q63HK3 967 aa21.71■■□□□ 1.07
LDLRAP1-201ENST00000374338 C1orf115Q9H7X2 142 aa21.7■■□□□ 1.06
LDLRAP1-201ENST00000374338 VIRMAQ69YN4 1812 aaKnown RBP21.7■■□□□ 1.06
LDLRAP1-201ENST00000374338 TRAK2O60296 914 aa21.7■■□□□ 1.06
LDLRAP1-201ENST00000374338 TMEM131LA2VDJ0 1609 aa21.69■■□□□ 1.06
LDLRAP1-201ENST00000374338 MVPQ14764 893 aaKnown RBP21.69■■□□□ 1.06
LDLRAP1-201ENST00000374338 TMEM57Q8N5G2 664 aa21.69■■□□□ 1.06
LDLRAP1-201ENST00000374338 TRIM44Q96DX7 344 aaPredicted RBP21.69■■□□□ 1.06
LDLRAP1-201ENST00000374338 METP08581 1390 aa21.69■■□□□ 1.06
LDLRAP1-201ENST00000374338 PREX1Q8TCU6 1659 aa21.69■■□□□ 1.06
LDLRAP1-201ENST00000374338 TSPYL6Q8N831 410 aa21.68■■□□□ 1.06
LDLRAP1-201ENST00000374338 ARHGAP31Q2M1Z3 1444 aa21.68■■□□□ 1.06
LDLRAP1-201ENST00000374338 ATAD2Q6PL18 1390 aa21.68■■□□□ 1.06
LDLRAP1-201ENST00000374338 NGEFQ8N5V2 710 aa21.67■■□□□ 1.06
LDLRAP1-201ENST00000374338 NLRP1Q9C000 1473 aa21.67■■□□□ 1.06
LDLRAP1-201ENST00000374338 CCDC27Q2M243 656 aa21.67■■□□□ 1.06
LDLRAP1-201ENST00000374338 ALKQ9UM73 1620 aa21.67■■□□□ 1.06
LDLRAP1-201ENST00000374338 SLC26A8Q96RN1 970 aa21.66■■□□□ 1.06
LDLRAP1-201ENST00000374338 RIMS2Q9UQ26 1411 aa21.65■■□□□ 1.06
LDLRAP1-201ENST00000374338 TBC1D32Q96NH3 1257 aa21.64■■□□□ 1.06
LDLRAP1-201ENST00000374338 NUDT16Q96DE0 195 aaKnown RBP21.64■■□□□ 1.05
LDLRAP1-201ENST00000374338 NSD2O96028 1365 aa21.63■■□□□ 1.05
LDLRAP1-201ENST00000374338 PDE4CQ08493 712 aa21.62■■□□□ 1.05
LDLRAP1-201ENST00000374338 PMFBP1Q8TBY8 1022 aa21.62■■□□□ 1.05
LDLRAP1-201ENST00000374338 UPF2Q9HAU5 1272 aaKnown RBP21.62■■□□□ 1.05
LDLRAP1-201ENST00000374338 WASLO00401 505 aaPredicted RBP21.62■■□□□ 1.05
LDLRAP1-201ENST00000374338 ATF7IPQ6VMQ6 1270 aa21.62■■□□□ 1.05
LDLRAP1-201ENST00000374338 MFAP1P55081 439 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms