RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 LRP6O75581 1613 aa18.55■□□□□ 0.56
A1CF-202ENST00000373993 NUTM2BA6NNL0 878 aaPredicted RBP18.55■□□□□ 0.56
A1CF-202ENST00000373993 NUTM2EB1AL46 878 aaPredicted RBP18.55■□□□□ 0.56
A1CF-202ENST00000373993 FAM161AQ3B820 660 aa18.55■□□□□ 0.56
A1CF-202ENST00000373993 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
A1CF-202ENST00000373993 MEX3CQ5U5Q3 659 aaKnown RBP18.55■□□□□ 0.56
A1CF-202ENST00000373993 NUTM2AQ8IVF1 878 aaPredicted RBP18.55■□□□□ 0.56
A1CF-202ENST00000373993 DCAF11Q8TEB1 546 aa18.54■□□□□ 0.56
A1CF-202ENST00000373993 LAMC1P11047 1609 aa18.54■□□□□ 0.56
A1CF-202ENST00000373993 NRXN1Q9ULB1 1477 aa18.54■□□□□ 0.56
A1CF-202ENST00000373993 CENPQQ7L2Z9 268 aaPredicted RBP18.53■□□□□ 0.56
A1CF-202ENST00000373993 TECPR2O15040 1411 aa18.53■□□□□ 0.56
A1CF-202ENST00000373993 C14orf93Q9H972 538 aaKnown RBP18.53■□□□□ 0.56
A1CF-202ENST00000373993 SAFB2Q14151 953 aaKnown RBP eCLIP18.52■□□□□ 0.56
A1CF-202ENST00000373993 CDC42BPGQ6DT37 1551 aa18.52■□□□□ 0.56
A1CF-202ENST00000373993 SPATA31A6Q5VVP1 1343 aa18.52■□□□□ 0.56
A1CF-202ENST00000373993 ABCC11Q96J66 1382 aa18.52■□□□□ 0.55
A1CF-202ENST00000373993 ESCO1Q5FWF5 840 aa18.51■□□□□ 0.55
A1CF-202ENST00000373993 KDM2BQ8NHM5 1336 aa18.51■□□□□ 0.55
A1CF-202ENST00000373993 POTEAQ6S8J7 498 aa18.5■□□□□ 0.55
A1CF-202ENST00000373993 LRRC59Q96AG4 307 aaKnown RBP18.5■□□□□ 0.55
A1CF-202ENST00000373993 CLCN1P35523 988 aa18.48■□□□□ 0.55
A1CF-202ENST00000373993 PRAM1Q96QH2 718 aa18.47■□□□□ 0.55
A1CF-202ENST00000373993 USP47Q96K76 1375 aa18.47■□□□□ 0.55
A1CF-202ENST00000373993 XPCQ01831 940 aaPredicted RBP18.46■□□□□ 0.55
A1CF-202ENST00000373993 TRAK1Q9UPV9 953 aa18.46■□□□□ 0.55
A1CF-202ENST00000373993 FMN2Q9NZ56 1722 aa18.45■□□□□ 0.54
A1CF-202ENST00000373993 POGKQ9P215 609 aa18.45■□□□□ 0.54
A1CF-202ENST00000373993 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
A1CF-202ENST00000373993 RGPD8O14715 1765 aaPredicted RBP18.44■□□□□ 0.54
A1CF-202ENST00000373993 ADGRB1O14514 1584 aa18.44■□□□□ 0.54
A1CF-202ENST00000373993 FOXO3O43524 673 aa18.44■□□□□ 0.54
A1CF-202ENST00000373993 FRAT2O75474 233 aaPredicted RBP18.44■□□□□ 0.54
A1CF-202ENST00000373993 NLRP13Q86W25 1043 aa18.44■□□□□ 0.54
A1CF-202ENST00000373993 ISY1Q9ULR0 285 aaKnown RBP18.44■□□□□ 0.54
A1CF-202ENST00000373993 CENPJQ9HC77 1338 aaPredicted RBP18.43■□□□□ 0.54
A1CF-202ENST00000373993 HSP90AA2PQ14568 343 aaPredicted RBP18.43■□□□□ 0.54
A1CF-202ENST00000373993 ZMYND15Q9H091 742 aa18.43■□□□□ 0.54
A1CF-202ENST00000373993 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
A1CF-202ENST00000373993 SOS2Q07890 1332 aaPredicted RBP18.43■□□□□ 0.54
A1CF-202ENST00000373993 HSP90AA1P07900 732 aaKnown RBP18.42■□□□□ 0.54
A1CF-202ENST00000373993 C8orf37Q96NL8 207 aa18.42■□□□□ 0.54
A1CF-202ENST00000373993 VIRMAQ69YN4 1812 aaKnown RBP18.41■□□□□ 0.54
A1CF-202ENST00000373993 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
A1CF-202ENST00000373993 ADAMTS2O95450 1211 aa18.41■□□□□ 0.54
A1CF-202ENST00000373993 C8orf34Q49A92 452 aa18.41■□□□□ 0.54
A1CF-202ENST00000373993 BLMP54132 1417 aaPredicted RBP18.41■□□□□ 0.54
A1CF-202ENST00000373993 BECN1Q14457 450 aa18.41■□□□□ 0.54
A1CF-202ENST00000373993 DLC1Q96QB1 1528 aa18.39■□□□□ 0.54
A1CF-202ENST00000373993 SIRT1Q96EB6 747 aa18.39■□□□□ 0.53
A1CF-202ENST00000373993 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
A1CF-202ENST00000373993 RRAGDQ9NQL2 400 aaPredicted RBP18.39■□□□□ 0.53
A1CF-202ENST00000373993 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.53
A1CF-202ENST00000373993 MINK1Q8N4C8 1332 aaPredicted RBP18.39■□□□□ 0.53
A1CF-202ENST00000373993 ZNF772Q68DY9 489 aaPredicted RBP18.39■□□□□ 0.53
A1CF-202ENST00000373993 EIF3AQ14152 1382 aaKnown RBP18.38■□□□□ 0.53
A1CF-202ENST00000373993 PXDNQ92626 1479 aa18.38■□□□□ 0.53
A1CF-202ENST00000373993 AFF2P51816 1311 aa18.38■□□□□ 0.53
A1CF-202ENST00000373993 KIF1AQ12756 1690 aa18.37■□□□□ 0.53
A1CF-202ENST00000373993 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.37■□□□□ 0.53
A1CF-202ENST00000373993 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
A1CF-202ENST00000373993 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
A1CF-202ENST00000373993 ARHGEF28Q8N1W1 1705 aaKnown RBP18.36■□□□□ 0.53
A1CF-202ENST00000373993 FSD2A1L4K1 749 aa18.35■□□□□ 0.53
A1CF-202ENST00000373993 STAC3Q96MF2 364 aa18.35■□□□□ 0.53
A1CF-202ENST00000373993 CRBNQ96SW2 442 aa18.35■□□□□ 0.53
A1CF-202ENST00000373993 USP32Q8NFA0 1604 aa18.34■□□□□ 0.53
A1CF-202ENST00000373993 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.53
A1CF-202ENST00000373993 NGLY1Q96IV0 654 aa18.33■□□□□ 0.53
A1CF-202ENST00000373993 PHF8Q9UPP1 1060 aa18.33■□□□□ 0.53
A1CF-202ENST00000373993 COL22A1Q8NFW1 1626 aaPredicted RBP18.33■□□□□ 0.53
A1CF-202ENST00000373993 ADGRB2O60241 1585 aa18.33■□□□□ 0.52
A1CF-202ENST00000373993 TPM2P07951 284 aa18.32■□□□□ 0.52
A1CF-202ENST00000373993 KRT28Q7Z3Y7 464 aa18.31■□□□□ 0.52
A1CF-202ENST00000373993 LMOD2Q6P5Q4 547 aa18.31■□□□□ 0.52
A1CF-202ENST00000373993 RXRBP28702 533 aa18.3■□□□□ 0.52
A1CF-202ENST00000373993 NBPF1Q3BBV0 1214 aa18.3■□□□□ 0.52
A1CF-202ENST00000373993 KIAA1210Q9ULL0 1709 aa18.29■□□□□ 0.52
A1CF-202ENST00000373993 GOLGA6L3A6NEY3 463 aa18.29■□□□□ 0.52
A1CF-202ENST00000373993 SLC4A3P48751 1232 aa18.28■□□□□ 0.52
A1CF-202ENST00000373993 PSME1Q06323 249 aa18.28■□□□□ 0.52
A1CF-202ENST00000373993 QTRT2Q9H974 415 aaKnown RBP18.28■□□□□ 0.52
A1CF-202ENST00000373993 WASLO00401 505 aaPredicted RBP18.28■□□□□ 0.52
A1CF-202ENST00000373993 PDCL3Q9H2J4 239 aa18.28■□□□□ 0.52
A1CF-202ENST00000373993 SPATA31A3Q5VYP0 1347 aa18.28■□□□□ 0.52
A1CF-202ENST00000373993 ANKARQ7Z5J8 1434 aa18.28■□□□□ 0.52
A1CF-202ENST00000373993 MARF1Q9Y4F3 1742 aaKnown RBP18.28■□□□□ 0.52
A1CF-202ENST00000373993 TULP4Q9NRJ4 1543 aa18.27■□□□□ 0.52
A1CF-202ENST00000373993 PRR36Q9H6K5 1346 aa18.27■□□□□ 0.52
A1CF-202ENST00000373993 MAPK8IP3Q9UPT6 1336 aa18.27■□□□□ 0.52
A1CF-202ENST00000373993 MRE11P49959 708 aa18.27■□□□□ 0.52
A1CF-202ENST00000373993 AAMPQ13685 434 aa18.27■□□□□ 0.52
A1CF-202ENST00000373993 NAP1L5Q96NT1 182 aaPredicted RBP18.27■□□□□ 0.52
A1CF-202ENST00000373993 HAP1P54257 671 aaPredicted RBP18.26■□□□□ 0.51
A1CF-202ENST00000373993 USP21Q9UK80 565 aa18.26■□□□□ 0.51
A1CF-202ENST00000373993 TNS3Q68CZ2 1445 aa18.26■□□□□ 0.51
A1CF-202ENST00000373993 TERF1P54274 439 aa18.26■□□□□ 0.51
A1CF-202ENST00000373993 CABLES1Q8TDN4 633 aa18.25■□□□□ 0.51
A1CF-202ENST00000373993 ANTXR1Q9H6X2 564 aa18.25■□□□□ 0.51
A1CF-202ENST00000373993 NINLQ9Y2I6 1382 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms