RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 AAMPQ13685 434 aa21.5■■□□□ 1.03
HDAC8-206ENST00000373571 CABP1Q9NZU7 370 aa21.5■■□□□ 1.03
HDAC8-206ENST00000373571 MAPK8IP3Q9UPT6 1336 aa21.5■■□□□ 1.03
HDAC8-206ENST00000373571 RLBP1P12271 317 aa21.5■■□□□ 1.03
HDAC8-206ENST00000373571 TNNQ9UQP3 1299 aa21.5■■□□□ 1.03
HDAC8-206ENST00000373571 SETD1AO15047 1707 aaKnown RBP21.5■■□□□ 1.03
HDAC8-206ENST00000373571 TMPOP42166 694 aaKnown RBP21.49■■□□□ 1.03
HDAC8-206ENST00000373571 RIMS2Q9UQ26 1411 aa21.49■■□□□ 1.03
HDAC8-206ENST00000373571 LAS1LQ9Y4W2 734 aaKnown RBP21.49■■□□□ 1.03
HDAC8-206ENST00000373571 VIRMAQ69YN4 1812 aaKnown RBP21.48■■□□□ 1.03
HDAC8-206ENST00000373571 PMFBP1Q8TBY8 1022 aa21.47■■□□□ 1.03
HDAC8-206ENST00000373571 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
HDAC8-206ENST00000373571 CT47B1P0C2W7 299 aaPredicted RBP21.46■■□□□ 1.03
HDAC8-206ENST00000373571 TSR2Q969E8 191 aaKnown RBP21.46■■□□□ 1.03
HDAC8-206ENST00000373571 TRIM35Q9UPQ4 493 aa21.46■■□□□ 1.03
HDAC8-206ENST00000373571 PNPLA6Q8IY17 1366 aa21.46■■□□□ 1.03
HDAC8-206ENST00000373571 MLECQ14165 292 aa21.46■■□□□ 1.03
HDAC8-206ENST00000373571 WAPLQ7Z5K2 1190 aa21.46■■□□□ 1.03
HDAC8-206ENST00000373571 ATP7BP35670 1465 aa21.45■■□□□ 1.02
HDAC8-206ENST00000373571 PCDHB15Q9Y5E8 787 aa21.44■■□□□ 1.02
HDAC8-206ENST00000373571 PPM1GO15355 546 aaPredicted RBP21.43■■□□□ 1.02
HDAC8-206ENST00000373571 EXOSC9Q06265 439 aaKnown RBP21.43■■□□□ 1.02
HDAC8-206ENST00000373571 ZKSCAN2Q63HK3 967 aa21.43■■□□□ 1.02
HDAC8-206ENST00000373571 PNNQ9H307 717 aaKnown RBP21.43■■□□□ 1.02
HDAC8-206ENST00000373571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.42■■□□□ 1.02
HDAC8-206ENST00000373571 IL16Q14005 1332 aa21.41■■□□□ 1.02
HDAC8-206ENST00000373571 RIPK4P57078 832 aa21.41■■□□□ 1.02
HDAC8-206ENST00000373571 NRXN3Q9Y4C0 1643 aa21.41■■□□□ 1.02
HDAC8-206ENST00000373571 CDC42BPGQ6DT37 1551 aa21.41■■□□□ 1.02
HDAC8-206ENST00000373571 MVPQ14764 893 aaKnown RBP21.41■■□□□ 1.02
HDAC8-206ENST00000373571 FTSJ3Q8IY81 847 aaKnown RBP21.4■■□□□ 1.02
HDAC8-206ENST00000373571 SMC4Q9NTJ3 1288 aa21.4■■□□□ 1.02
HDAC8-206ENST00000373571 DAXXQ9UER7 740 aaPredicted RBP21.4■■□□□ 1.02
HDAC8-206ENST00000373571 NEFMP07197 916 aa21.4■■□□□ 1.02
HDAC8-206ENST00000373571 DZIP1LQ8IYY4 767 aaKnown RBP21.4■■□□□ 1.02
HDAC8-206ENST00000373571 BCL11AQ9H165 835 aa21.39■■□□□ 1.01
HDAC8-206ENST00000373571 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.01
HDAC8-206ENST00000373571 SLC4A3P48751 1232 aa21.38■■□□□ 1.01
HDAC8-206ENST00000373571 RWDD1Q9H446 243 aaPredicted RBP21.38■■□□□ 1.01
HDAC8-206ENST00000373571 USP35Q9P2H5 1018 aa21.38■■□□□ 1.01
HDAC8-206ENST00000373571 POLKQ9UBT6 870 aa21.37■■□□□ 1.01
HDAC8-206ENST00000373571 FCHSD2O94868 740 aa21.37■■□□□ 1.01
HDAC8-206ENST00000373571 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.36■■□□□ 1.01
HDAC8-206ENST00000373571 SSH1Q8WYL5 1049 aa21.36■■□□□ 1.01
HDAC8-206ENST00000373571 MAP2P11137 1827 aaKnown RBP21.36■■□□□ 1.01
HDAC8-206ENST00000373571 PPIP5K1Q6PFW1 1433 aa21.36■■□□□ 1.01
HDAC8-206ENST00000373571 WASLO00401 505 aaPredicted RBP21.35■■□□□ 1.01
HDAC8-206ENST00000373571 FBLN1P23142 703 aa21.35■■□□□ 1.01
HDAC8-206ENST00000373571 METP08581 1390 aa21.35■■□□□ 1.01
HDAC8-206ENST00000373571 FAM135BQ49AJ0 1406 aa21.34■■□□□ 1.01
HDAC8-206ENST00000373571 TRIM27P14373 513 aa21.34■■□□□ 1.01
HDAC8-206ENST00000373571 RSPH6AQ9H0K4 717 aa21.34■■□□□ 1.01
HDAC8-206ENST00000373571 ESF1Q9H501 851 aaKnown RBP21.34■■□□□ 1.01
HDAC8-206ENST00000373571 PDZRN3Q9UPQ7 1066 aa21.34■■□□□ 1.01
HDAC8-206ENST00000373571 CPSF1Q10570 1443 aaKnown RBP21.34■■□□□ 1.01
HDAC8-206ENST00000373571 EDC4Q6P2E9 1401 aaKnown RBP21.34■■□□□ 1.01
HDAC8-206ENST00000373571 ZMYM3Q14202 1370 aa21.33■■□□□ 1.01
HDAC8-206ENST00000373571 PRKAR2BP31323 418 aa21.33■■□□□ 1.01
HDAC8-206ENST00000373571 KNDC1Q76NI1 1749 aa21.33■■□□□ 1
HDAC8-206ENST00000373571 ATF7IPQ6VMQ6 1270 aa21.32■■□□□ 1
HDAC8-206ENST00000373571 TXNDC2Q86VQ3 553 aa21.32■■□□□ 1
HDAC8-206ENST00000373571 USP19O94966 1318 aa21.32■■□□□ 1
HDAC8-206ENST00000373571 NOB1Q9ULX3 412 aaKnown RBP21.31■■□□□ 1
HDAC8-206ENST00000373571 SEC24BO95487 1268 aa21.3■■□□□ 1
HDAC8-206ENST00000373571 ITPRIPQ8IWB1 547 aa21.3■■□□□ 1
HDAC8-206ENST00000373571 DDX19BQ9UMR2 479 aa21.3■■□□□ 1
HDAC8-206ENST00000373571 KIF13AQ9H1H9 1805 aa21.3■■□□□ 1
HDAC8-206ENST00000373571 NME9Q86XW9 330 aa21.29■■□□□ 1
HDAC8-206ENST00000373571 EMILIN1Q9Y6C2 1016 aa21.29■■□□□ 1
HDAC8-206ENST00000373571 MON2Q7Z3U7 1717 aa21.28■■□□□ 1
HDAC8-206ENST00000373571 HMOX1P09601 288 aa21.28■■□□□ 1
HDAC8-206ENST00000373571 NUDT16Q96DE0 195 aaKnown RBP21.28■■□□□ 1
HDAC8-206ENST00000373571 KIF16BQ96L93 1317 aa21.28■■□□□ 1
HDAC8-206ENST00000373571 TECPR2O15040 1411 aa21.28■■□□□ 1
HDAC8-206ENST00000373571 CDK12Q9NYV4 1490 aaPredicted RBP21.27■■□□□ 1
HDAC8-206ENST00000373571 HDGFP51858 240 aaKnown RBP21.27■■□□□ 1
HDAC8-206ENST00000373571 CPS1P31327 1500 aa21.27■■□□□ 1
HDAC8-206ENST00000373571 NFE2L2Q16236 605 aa21.26■□□□□ 0.99
HDAC8-206ENST00000373571 ALDH1L2Q3SY69 923 aa21.26■□□□□ 0.99
HDAC8-206ENST00000373571 AATKQ6ZMQ8 1374 aa21.26■□□□□ 0.99
HDAC8-206ENST00000373571 SIRT1Q96EB6 747 aa21.26■□□□□ 0.99
HDAC8-206ENST00000373571 PHACTR3Q96KR7 559 aa21.26■□□□□ 0.99
HDAC8-206ENST00000373571 ZRANB1Q9UGI0 708 aa21.26■□□□□ 0.99
HDAC8-206ENST00000373571 TNRQ92752 1358 aa21.25■□□□□ 0.99
HDAC8-206ENST00000373571 NCKAP5LQ9HCH0 1330 aa21.25■□□□□ 0.99
HDAC8-206ENST00000373571 IPO8O15397 1037 aaKnown RBP21.25■□□□□ 0.99
HDAC8-206ENST00000373571 IL13P35225 146 aa21.25■□□□□ 0.99
HDAC8-206ENST00000373571 TMEM57Q8N5G2 664 aa21.25■□□□□ 0.99
HDAC8-206ENST00000373571 CCDC61Q9Y6R9 512 aa21.25■□□□□ 0.99
HDAC8-206ENST00000373571 AKAP12Q02952 1782 aa21.25■□□□□ 0.99
HDAC8-206ENST00000373571 ITSN1Q15811 1721 aa21.25■□□□□ 0.99
HDAC8-206ENST00000373571 HDAC1Q13547 482 aaPredicted RBP21.25■□□□□ 0.99
HDAC8-206ENST00000373571 NFKBIBQ15653 356 aa21.24■□□□□ 0.99
HDAC8-206ENST00000373571 COG3Q96JB2 828 aa21.24■□□□□ 0.99
HDAC8-206ENST00000373571 UBR1Q8IWV7 1749 aa21.23■□□□□ 0.99
HDAC8-206ENST00000373571 C3P01024 1663 aa21.23■□□□□ 0.99
HDAC8-206ENST00000373571 CALD1Q05682 793 aaKnown RBP21.22■□□□□ 0.99
HDAC8-206ENST00000373571 ZNF428Q96B54 188 aa21.21■□□□□ 0.99
HDAC8-206ENST00000373571 UPF2Q9HAU5 1272 aaKnown RBP21.21■□□□□ 0.99
HDAC8-206ENST00000373571 TMEM2Q9UHN6 1383 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms