RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 CHD1LQ86WJ1 897 aa14.91□□□□□ -0.02
NCDN-202ENST00000373243 FANCAO15360 1455 aa14.91□□□□□ -0.02
NCDN-202ENST00000373243 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
NCDN-202ENST00000373243 NOS1P29475 1434 aa14.9□□□□□ -0.02
NCDN-202ENST00000373243 TTC37Q6PGP7 1564 aa14.9□□□□□ -0.02
NCDN-202ENST00000373243 PLA2R1Q13018 1463 aa14.89□□□□□ -0.03
NCDN-202ENST00000373243 CD109Q6YHK3 1445 aa14.89□□□□□ -0.03
NCDN-202ENST00000373243 SMAP1Q8IYB5 467 aaPredicted RBP14.89□□□□□ -0.03
NCDN-202ENST00000373243 RTF1Q92541 710 aaKnown RBP14.89□□□□□ -0.03
NCDN-202ENST00000373243 RILPL2Q969X0 211 aa14.89□□□□□ -0.03
NCDN-202ENST00000373243 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
NCDN-202ENST00000373243 ADGRL1O94910 1474 aa14.89□□□□□ -0.03
NCDN-202ENST00000373243 ZNF521Q96K83 1311 aa14.89□□□□□ -0.03
NCDN-202ENST00000373243 UQCRHLA0A096LP55 91 aa14.89□□□□□ -0.03
NCDN-202ENST00000373243 UQCRHP07919 91 aa14.89□□□□□ -0.03
NCDN-202ENST00000373243 KLHL34Q8N239 644 aa14.89□□□□□ -0.03
NCDN-202ENST00000373243 SHANK2Q9UPX8 1470 aa14.88□□□□□ -0.03
NCDN-202ENST00000373243 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.88□□□□□ -0.03
NCDN-202ENST00000373243 LTV1Q96GA3 475 aaPredicted RBP14.88□□□□□ -0.03
NCDN-202ENST00000373243 TWISTNBQ3B726 338 aaPredicted RBP14.87□□□□□ -0.03
NCDN-202ENST00000373243 RRS1Q15050 365 aaKnown RBP14.87□□□□□ -0.03
NCDN-202ENST00000373243 MPNDQ8N594 471 aa14.87□□□□□ -0.03
NCDN-202ENST00000373243 CDK19Q9BWU1 502 aa14.87□□□□□ -0.03
NCDN-202ENST00000373243 PPP4R3BQ5MIZ7 849 aa14.87□□□□□ -0.03
NCDN-202ENST00000373243 CAVIN1Q6NZI2 390 aaKnown RBP14.87□□□□□ -0.03
NCDN-202ENST00000373243 NINLQ9Y2I6 1382 aa14.87□□□□□ -0.03
NCDN-202ENST00000373243 OS9Q13438 667 aaPredicted RBP14.86□□□□□ -0.03
NCDN-202ENST00000373243 RNF214Q8ND24 703 aa14.86□□□□□ -0.03
NCDN-202ENST00000373243 COG3Q96JB2 828 aa14.86□□□□□ -0.03
NCDN-202ENST00000373243 CHMP4AQ9BY43 222 aa14.86□□□□□ -0.03
NCDN-202ENST00000373243 SAMD9LQ8IVG5 1584 aa14.86□□□□□ -0.03
NCDN-202ENST00000373243 CDC42BPAQ5VT25 1732 aa14.86□□□□□ -0.03
NCDN-202ENST00000373243 WAPLQ7Z5K2 1190 aa14.86□□□□□ -0.03
NCDN-202ENST00000373243 IPO4Q8TEX9 1081 aaKnown RBP14.86□□□□□ -0.03
NCDN-202ENST00000373243 PIK3C2GO75747 1445 aa14.85□□□□□ -0.03
NCDN-202ENST00000373243 ST18O60284 1047 aa14.85□□□□□ -0.03
NCDN-202ENST00000373243 TNPO1Q92973 898 aaKnown RBP14.85□□□□□ -0.03
NCDN-202ENST00000373243 GNAI1P63096 354 aa14.85□□□□□ -0.03
NCDN-202ENST00000373243 TAOK2Q9UL54 1235 aa14.85□□□□□ -0.03
NCDN-202ENST00000373243 CBX1P83916 185 aa14.84□□□□□ -0.03
NCDN-202ENST00000373243 WDR7Q9Y4E6 1490 aa14.84□□□□□ -0.03
NCDN-202ENST00000373243 CDC45O75419 566 aa14.84□□□□□ -0.03
NCDN-202ENST00000373243 NASPP49321 788 aaPredicted RBP14.84□□□□□ -0.03
NCDN-202ENST00000373243 SSFA2P28290 1259 aa14.84□□□□□ -0.03
NCDN-202ENST00000373243 LMOD2Q6P5Q4 547 aa14.84□□□□□ -0.03
NCDN-202ENST00000373243 API5Q9BZZ5 524 aaKnown RBP14.84□□□□□ -0.03
NCDN-202ENST00000373243 SMARCA5O60264 1052 aaPredicted RBP14.83□□□□□ -0.04
NCDN-202ENST00000373243 IDI1Q13907 227 aa14.83□□□□□ -0.04
NCDN-202ENST00000373243 SKOR2Q2VWA4 1001 aaPredicted RBP14.83□□□□□ -0.04
NCDN-202ENST00000373243 TRMT2AQ8IZ69 625 aaKnown RBP14.83□□□□□ -0.04
NCDN-202ENST00000373243 C14orf93Q9H972 538 aaKnown RBP14.83□□□□□ -0.04
NCDN-202ENST00000373243 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.04
NCDN-202ENST00000373243 FAM83GA6ND36 823 aa14.82□□□□□ -0.04
NCDN-202ENST00000373243 PRPF40AO75400 957 aaKnown RBP14.82□□□□□ -0.04
NCDN-202ENST00000373243 MIS18AQ9NYP9 233 aa14.82□□□□□ -0.04
NCDN-202ENST00000373243 IGSF3O75054 1194 aa14.82□□□□□ -0.04
NCDN-202ENST00000373243 ADGBQ8N7X0 1667 aa14.82□□□□□ -0.04
NCDN-202ENST00000373243 K7ELQ4 463 aaPredicted RBP14.82□□□□□ -0.04
NCDN-202ENST00000373243 KCNJ4P48050 445 aa14.82□□□□□ -0.04
NCDN-202ENST00000373243 LMOD3Q0VAK6 560 aa14.81□□□□□ -0.04
NCDN-202ENST00000373243 STK31Q9BXU1 1019 aa14.81□□□□□ -0.04
NCDN-202ENST00000373243 ANO2Q9NQ90 1003 aa14.81□□□□□ -0.04
NCDN-202ENST00000373243 CGNQ9P2M7 1197 aaKnown RBP14.81□□□□□ -0.04
NCDN-202ENST00000373243 POLR3AO14802 1390 aaPredicted RBP14.81□□□□□ -0.04
NCDN-202ENST00000373243 XPCQ01831 940 aaPredicted RBP14.81□□□□□ -0.04
NCDN-202ENST00000373243 FSD2A1L4K1 749 aa14.81□□□□□ -0.04
NCDN-202ENST00000373243 MCCP23508 829 aa14.81□□□□□ -0.04
NCDN-202ENST00000373243 FBXO31Q5XUX0 539 aaPredicted RBP14.81□□□□□ -0.04
NCDN-202ENST00000373243 TXNDC2Q86VQ3 553 aa14.81□□□□□ -0.04
NCDN-202ENST00000373243 FYB1O15117 783 aa14.8□□□□□ -0.04
NCDN-202ENST00000373243 TSPYL6Q8N831 410 aa14.8□□□□□ -0.04
NCDN-202ENST00000373243 CFAP65Q6ZU64 1925 aaKnown RBP14.8□□□□□ -0.04
NCDN-202ENST00000373243 HMMRO75330 724 aa14.8□□□□□ -0.04
NCDN-202ENST00000373243 ZNF428Q96B54 188 aa14.8□□□□□ -0.04
NCDN-202ENST00000373243 USP19O94966 1318 aa14.8□□□□□ -0.04
NCDN-202ENST00000373243 SULT6B1Q6IMI4 303 aa14.8□□□□□ -0.04
NCDN-202ENST00000373243 TBC1D9Q6ZT07 1266 aa14.8□□□□□ -0.04
NCDN-202ENST00000373243 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.8□□□□□ -0.04
NCDN-202ENST00000373243 KDM5DQ9BY66 1539 aa14.8□□□□□ -0.04
NCDN-202ENST00000373243 DUOX2Q9NRD8 1548 aa14.8□□□□□ -0.04
NCDN-202ENST00000373243 NEK4P51957 841 aa14.79□□□□□ -0.04
NCDN-202ENST00000373243 ZSCAN30Q86W11 494 aa14.79□□□□□ -0.04
NCDN-202ENST00000373243 ZBTB22O15209 634 aa14.79□□□□□ -0.04
NCDN-202ENST00000373243 GCC1Q96CN9 775 aa14.79□□□□□ -0.04
NCDN-202ENST00000373243 NME9Q86XW9 330 aa14.78□□□□□ -0.04
NCDN-202ENST00000373243 CT47B1P0C2W7 299 aaPredicted RBP14.78□□□□□ -0.04
NCDN-202ENST00000373243 INTS3Q68E01 1043 aaKnown RBP14.78□□□□□ -0.04
NCDN-202ENST00000373243 C16orf71Q8IYS4 520 aaPredicted RBP14.78□□□□□ -0.04
NCDN-202ENST00000373243 ZNF830Q96NB3 372 aaPredicted RBP14.78□□□□□ -0.04
NCDN-202ENST00000373243 OFD1O75665 1012 aa14.78□□□□□ -0.04
NCDN-202ENST00000373243 PTMSP20962 102 aa14.78□□□□□ -0.04
NCDN-202ENST00000373243 HAP1P54257 671 aaPredicted RBP14.78□□□□□ -0.04
NCDN-202ENST00000373243 ZCCHC11Q5TAX3 1644 aaKnown RBP14.77□□□□□ -0.04
NCDN-202ENST00000373243 AMPHP49418 695 aa14.77□□□□□ -0.04
NCDN-202ENST00000373243 NUTM2GQ5VZR2 741 aa14.77□□□□□ -0.04
NCDN-202ENST00000373243 FCHSD2O94868 740 aa14.77□□□□□ -0.05
NCDN-202ENST00000373243 DMTNQ08495 405 aa14.77□□□□□ -0.05
NCDN-202ENST00000373243 FKBP5Q13451 457 aaPredicted RBP14.77□□□□□ -0.05
NCDN-202ENST00000373243 MCM10Q7L590 875 aa14.77□□□□□ -0.05
NCDN-202ENST00000373243 AEBP1Q8IUX7 1158 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms