RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 CABP1Q9NZU7 370 aa29.25■■■□□ 2.27
BRD3-202ENST00000371834 STAG3Q9UJ98 1225 aa29.25■■■□□ 2.27
BRD3-202ENST00000371834 ALKQ9UM73 1620 aa29.25■■■□□ 2.27
BRD3-202ENST00000371834 MVPQ14764 893 aaKnown RBP29.25■■■□□ 2.27
BRD3-202ENST00000371834 ZKSCAN2Q63HK3 967 aa29.25■■■□□ 2.27
BRD3-202ENST00000371834 PDZRN3Q9UPQ7 1066 aa29.25■■■□□ 2.27
BRD3-202ENST00000371834 CLTCQ00610 1675 aaKnown RBP29.24■■■□□ 2.27
BRD3-202ENST00000371834 CYB5RLQ6IPT4 315 aa29.23■■■□□ 2.27
BRD3-202ENST00000371834 HDGFL2Q7Z4V5 671 aaPredicted RBP29.23■■■□□ 2.27
BRD3-202ENST00000371834 SMC4Q9NTJ3 1288 aa29.23■■■□□ 2.27
BRD3-202ENST00000371834 FTSJ3Q8IY81 847 aaKnown RBP29.22■■■□□ 2.27
BRD3-202ENST00000371834 DZIP1LQ8IYY4 767 aaKnown RBP29.22■■■□□ 2.27
BRD3-202ENST00000371834 ANKRD26Q9UPS8 1709 aa29.22■■■□□ 2.27
BRD3-202ENST00000371834 RWDD1Q9H446 243 aaPredicted RBP29.21■■■□□ 2.27
BRD3-202ENST00000371834 MED14O60244 1454 aa29.21■■■□□ 2.27
BRD3-202ENST00000371834 DIAPH1O60610 1272 aaKnown RBP29.2■■■□□ 2.27
BRD3-202ENST00000371834 ARHGEF40Q8TER5 1519 aa29.2■■■□□ 2.26
BRD3-202ENST00000371834 FBLN1P23142 703 aa29.2■■■□□ 2.26
BRD3-202ENST00000371834 RIPK4P57078 832 aa29.2■■■□□ 2.26
BRD3-202ENST00000371834 SSH1Q8WYL5 1049 aa29.2■■■□□ 2.26
BRD3-202ENST00000371834 CT47B1P0C2W7 299 aaPredicted RBP29.18■■■□□ 2.26
BRD3-202ENST00000371834 WAPLQ7Z5K2 1190 aa29.18■■■□□ 2.26
BRD3-202ENST00000371834 TRIM27P14373 513 aa29.18■■■□□ 2.26
BRD3-202ENST00000371834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.18■■■□□ 2.26
BRD3-202ENST00000371834 FAM69CQ0P6D2 419 aa29.16■■■□□ 2.26
BRD3-202ENST00000371834 PNPLA6Q8IY17 1366 aa29.15■■■□□ 2.26
BRD3-202ENST00000371834 NOB1Q9ULX3 412 aaKnown RBP29.13■■■□□ 2.25
BRD3-202ENST00000371834 IL16Q14005 1332 aa29.12■■■□□ 2.25
BRD3-202ENST00000371834 KIF20BQ96Q89 1820 aa29.11■■■□□ 2.25
BRD3-202ENST00000371834 ITPRIPQ8IWB1 547 aa29.11■■■□□ 2.25
BRD3-202ENST00000371834 ATF7IPQ6VMQ6 1270 aa29.11■■■□□ 2.25
BRD3-202ENST00000371834 POLKQ9UBT6 870 aa29.09■■■□□ 2.25
BRD3-202ENST00000371834 FRAT2O75474 233 aaPredicted RBP29.09■■■□□ 2.25
BRD3-202ENST00000371834 MLECQ14165 292 aa29.08■■■□□ 2.24
BRD3-202ENST00000371834 A2ML1A8K2U0 1454 aa29.07■■■□□ 2.24
BRD3-202ENST00000371834 PRKAR2BP31323 418 aa29.07■■■□□ 2.24
BRD3-202ENST00000371834 LRRC7Q96NW7 1537 aa29.06■■■□□ 2.24
BRD3-202ENST00000371834 FCHSD2O94868 740 aa29.06■■■□□ 2.24
BRD3-202ENST00000371834 TMEM57Q8N5G2 664 aa29.06■■■□□ 2.24
BRD3-202ENST00000371834 PNNQ9H307 717 aaKnown RBP29.06■■■□□ 2.24
BRD3-202ENST00000371834 TSPOAP1O95153 1857 aa29.06■■■□□ 2.24
BRD3-202ENST00000371834 DDX19BQ9UMR2 479 aa29.05■■■□□ 2.24
BRD3-202ENST00000371834 RIMS2Q9UQ26 1411 aa29.05■■■□□ 2.24
BRD3-202ENST00000371834 GSE1Q14687 1217 aa29.05■■■□□ 2.24
BRD3-202ENST00000371834 RSPH6AQ9H0K4 717 aa29.05■■■□□ 2.24
BRD3-202ENST00000371834 ZMYM3Q14202 1370 aa29.05■■■□□ 2.24
BRD3-202ENST00000371834 HMOX1P09601 288 aa29.03■■■□□ 2.24
BRD3-202ENST00000371834 PHACTR3Q96KR7 559 aa29.02■■■□□ 2.24
BRD3-202ENST00000371834 TBC1D32Q96NH3 1257 aa29.02■■■□□ 2.24
BRD3-202ENST00000371834 HDAC1Q13547 482 aaPredicted RBP29.01■■■□□ 2.24
BRD3-202ENST00000371834 UPF2Q9HAU5 1272 aaKnown RBP29.01■■■□□ 2.24
BRD3-202ENST00000371834 DLC1Q96QB1 1528 aa29.01■■■□□ 2.23
BRD3-202ENST00000371834 FAM135BQ49AJ0 1406 aa29.01■■■□□ 2.23
BRD3-202ENST00000371834 BECN1Q14457 450 aa29■■■□□ 2.23
BRD3-202ENST00000371834 EMILIN1Q9Y6C2 1016 aa29■■■□□ 2.23
BRD3-202ENST00000371834 ATP7BP35670 1465 aa29■■■□□ 2.23
BRD3-202ENST00000371834 THUMPD2Q9BTF0 503 aaKnown RBP29■■■□□ 2.23
BRD3-202ENST00000371834 CDC42BPGQ6DT37 1551 aa29■■■□□ 2.23
BRD3-202ENST00000371834 ZRANB1Q9UGI0 708 aa28.99■■■□□ 2.23
BRD3-202ENST00000371834 DIP2BQ9P265 1576 aa28.99■■■□□ 2.23
BRD3-202ENST00000371834 SETD1AO15047 1707 aaKnown RBP28.99■■■□□ 2.23
BRD3-202ENST00000371834 RIMBP3CA6NJZ7 1639 aa28.98■■■□□ 2.23
BRD3-202ENST00000371834 RIMBP3BA6NNM3 1639 aa28.98■■■□□ 2.23
BRD3-202ENST00000371834 RIMBP3Q9UFD9 1639 aa28.98■■■□□ 2.23
BRD3-202ENST00000371834 NME9Q86XW9 330 aa28.98■■■□□ 2.23
BRD3-202ENST00000371834 ZBTB40Q9NUA8 1239 aa28.98■■■□□ 2.23
BRD3-202ENST00000371834 KIF16BQ96L93 1317 aa28.98■■■□□ 2.23
BRD3-202ENST00000371834 SLKQ9H2G2 1235 aaPredicted RBP28.97■■■□□ 2.23
BRD3-202ENST00000371834 SPATA31D1Q6ZQQ2 1576 aa28.97■■■□□ 2.23
BRD3-202ENST00000371834 MAP2P11137 1827 aaKnown RBP28.97■■■□□ 2.23
BRD3-202ENST00000371834 AGLP35573 1532 aa28.97■■■□□ 2.23
BRD3-202ENST00000371834 IL27Q8NEV9 243 aa28.97■■■□□ 2.23
BRD3-202ENST00000371834 PPP6R1Q9UPN7 881 aa28.96■■■□□ 2.23
BRD3-202ENST00000371834 NCKAP5LQ9HCH0 1330 aa28.96■■■□□ 2.23
BRD3-202ENST00000371834 IPO8O15397 1037 aaKnown RBP28.96■■■□□ 2.23
BRD3-202ENST00000371834 WASLO00401 505 aaPredicted RBP28.95■■■□□ 2.22
BRD3-202ENST00000371834 TXNDC2Q86VQ3 553 aa28.95■■■□□ 2.22
BRD3-202ENST00000371834 PPIP5K1Q6PFW1 1433 aa28.95■■■□□ 2.22
BRD3-202ENST00000371834 METP08581 1390 aa28.95■■■□□ 2.22
BRD3-202ENST00000371834 REREQ9P2R6 1566 aa28.95■■■□□ 2.22
BRD3-202ENST00000371834 ALDH1L2Q3SY69 923 aa28.94■■■□□ 2.22
BRD3-202ENST00000371834 NFE2L2Q16236 605 aa28.94■■■□□ 2.22
BRD3-202ENST00000371834 SMC5Q8IY18 1101 aa28.93■■■□□ 2.22
BRD3-202ENST00000371834 CPSF1Q10570 1443 aaKnown RBP28.92■■■□□ 2.22
BRD3-202ENST00000371834 IL13P35225 146 aa28.91■■■□□ 2.22
BRD3-202ENST00000371834 TBC1D2Q9BYX2 928 aa28.91■■■□□ 2.22
BRD3-202ENST00000371834 EDC4Q6P2E9 1401 aaKnown RBP28.91■■■□□ 2.22
BRD3-202ENST00000371834 NRXN3Q9Y4C0 1643 aa28.9■■■□□ 2.22
BRD3-202ENST00000371834 TSPYL6Q8N831 410 aa28.9■■■□□ 2.22
BRD3-202ENST00000371834 MFAP1P55081 439 aaKnown RBP28.89■■■□□ 2.22
BRD3-202ENST00000371834 NUDT16Q96DE0 195 aaKnown RBP28.88■■■□□ 2.21
BRD3-202ENST00000371834 ELL2O00472 640 aaPredicted RBP28.88■■■□□ 2.21
BRD3-202ENST00000371834 VAMP4O75379 141 aa28.88■■■□□ 2.21
BRD3-202ENST00000371834 RRS1Q15050 365 aaKnown RBP28.88■■■□□ 2.21
BRD3-202ENST00000371834 ANTXR1Q9H6X2 564 aa28.87■■■□□ 2.21
BRD3-202ENST00000371834 CPS1P31327 1500 aa28.85■■■□□ 2.21
BRD3-202ENST00000371834 MRPL50Q8N5N7 158 aaKnown RBP28.85■■■□□ 2.21
BRD3-202ENST00000371834 C22orf23Q9BZE7 217 aa28.85■■■□□ 2.21
BRD3-202ENST00000371834 MBIPQ9NS73 344 aa28.84■■■□□ 2.21
BRD3-202ENST00000371834 LNPKQ9C0E8 428 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms