RNA–Protein interactions for RNA: ENST00000371600.7

NPDC1-201, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPDC1, Length 2,187 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-201ENST00000371600 U2SURPO15042 1029 aaKnown RBP32.28■■■□□ 2.76
NPDC1-201ENST00000371600 SENP3Q9H4L4 574 aaPredicted RBP32.28■■■□□ 2.76
NPDC1-201ENST00000371600 DAXXQ9UER7 740 aaPredicted RBP32.28■■■□□ 2.76
NPDC1-201ENST00000371600 CDK19Q9BWU1 502 aa32.27■■■□□ 2.76
NPDC1-201ENST00000371600 TMPOP42166 694 aaKnown RBP32.26■■■□□ 2.76
NPDC1-201ENST00000371600 ANKRD26Q9UPS8 1709 aa32.26■■■□□ 2.76
NPDC1-201ENST00000371600 NEFMP07197 916 aa32.26■■■□□ 2.75
NPDC1-201ENST00000371600 RLBP1P12271 317 aa32.26■■■□□ 2.75
NPDC1-201ENST00000371600 PNNQ9H307 717 aaKnown RBP32.25■■■□□ 2.75
NPDC1-201ENST00000371600 BCL2L13Q9BXK5 485 aa32.24■■■□□ 2.75
NPDC1-201ENST00000371600 IL16Q14005 1332 aa32.23■■■□□ 2.75
NPDC1-201ENST00000371600 PNPLA6Q8IY17 1366 aa32.22■■■□□ 2.75
NPDC1-201ENST00000371600 ZKSCAN2Q63HK3 967 aa32.22■■■□□ 2.75
NPDC1-201ENST00000371600 PCDHB15Q9Y5E8 787 aa32.21■■■□□ 2.75
NPDC1-201ENST00000371600 MLECQ14165 292 aa32.21■■■□□ 2.75
NPDC1-201ENST00000371600 TRIM35Q9UPQ4 493 aa32.21■■■□□ 2.75
NPDC1-201ENST00000371600 DIAPH1O60610 1272 aaKnown RBP32.2■■■□□ 2.75
NPDC1-201ENST00000371600 CABP1Q9NZU7 370 aa32.2■■■□□ 2.75
NPDC1-201ENST00000371600 TNNQ9UQP3 1299 aa32.2■■■□□ 2.75
NPDC1-201ENST00000371600 ZMYM3Q14202 1370 aa32.2■■■□□ 2.74
NPDC1-201ENST00000371600 DLC1Q96QB1 1528 aa32.2■■■□□ 2.74
NPDC1-201ENST00000371600 MVPQ14764 893 aaKnown RBP32.19■■■□□ 2.74
NPDC1-201ENST00000371600 RWDD1Q9H446 243 aaPredicted RBP32.19■■■□□ 2.74
NPDC1-201ENST00000371600 DZIP1LQ8IYY4 767 aaKnown RBP32.16■■■□□ 2.74
NPDC1-201ENST00000371600 TSR2Q969E8 191 aaKnown RBP32.16■■■□□ 2.74
NPDC1-201ENST00000371600 A2ML1A8K2U0 1454 aa32.16■■■□□ 2.74
NPDC1-201ENST00000371600 EXOSC9Q06265 439 aaKnown RBP32.15■■■□□ 2.74
NPDC1-201ENST00000371600 FTSJ3Q8IY81 847 aaKnown RBP32.14■■■□□ 2.74
NPDC1-201ENST00000371600 SPATA31D1Q6ZQQ2 1576 aa32.14■■■□□ 2.74
NPDC1-201ENST00000371600 RIPK4P57078 832 aa32.13■■■□□ 2.73
NPDC1-201ENST00000371600 VIRMAQ69YN4 1812 aaKnown RBP32.12■■■□□ 2.73
NPDC1-201ENST00000371600 SLC4A3P48751 1232 aa32.12■■■□□ 2.73
NPDC1-201ENST00000371600 FCHSD2O94868 740 aa32.12■■■□□ 2.73
NPDC1-201ENST00000371600 SMC4Q9NTJ3 1288 aa32.12■■■□□ 2.73
NPDC1-201ENST00000371600 ATP7BP35670 1465 aa32.12■■■□□ 2.73
NPDC1-201ENST00000371600 RIMS2Q9UQ26 1411 aa32.12■■■□□ 2.73
NPDC1-201ENST00000371600 PDZRN3Q9UPQ7 1066 aa32.09■■■□□ 2.73
NPDC1-201ENST00000371600 KIF20BQ96Q89 1820 aa32.09■■■□□ 2.73
NPDC1-201ENST00000371600 USP19O94966 1318 aa32.09■■■□□ 2.73
NPDC1-201ENST00000371600 WAPLQ7Z5K2 1190 aa32.07■■■□□ 2.72
NPDC1-201ENST00000371600 SSH1Q8WYL5 1049 aa32.07■■■□□ 2.72
NPDC1-201ENST00000371600 CDC42BPGQ6DT37 1551 aa32.07■■■□□ 2.72
NPDC1-201ENST00000371600 DDX19BQ9UMR2 479 aa32.05■■■□□ 2.72
NPDC1-201ENST00000371600 TRIM27P14373 513 aa32.04■■■□□ 2.72
NPDC1-201ENST00000371600 ATF7IPQ6VMQ6 1270 aa32.04■■■□□ 2.72
NPDC1-201ENST00000371600 POLKQ9UBT6 870 aa32.04■■■□□ 2.72
NPDC1-201ENST00000371600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.03■■■□□ 2.72
NPDC1-201ENST00000371600 NFKBIBQ15653 356 aa32.02■■■□□ 2.72
NPDC1-201ENST00000371600 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.02■■■□□ 2.72
NPDC1-201ENST00000371600 SETD1AO15047 1707 aaKnown RBP32.02■■■□□ 2.72
NPDC1-201ENST00000371600 SEC24BO95487 1268 aa32.01■■■□□ 2.71
NPDC1-201ENST00000371600 RSPH6AQ9H0K4 717 aa32.01■■■□□ 2.71
NPDC1-201ENST00000371600 IPO8O15397 1037 aaKnown RBP32■■■□□ 2.71
NPDC1-201ENST00000371600 HDAC1Q13547 482 aaPredicted RBP32■■■□□ 2.71
NPDC1-201ENST00000371600 KIF16BQ96L93 1317 aa32■■■□□ 2.71
NPDC1-201ENST00000371600 ALDH1L2Q3SY69 923 aa31.99■■■□□ 2.71
NPDC1-201ENST00000371600 FAM135BQ49AJ0 1406 aa31.99■■■□□ 2.71
NPDC1-201ENST00000371600 NOB1Q9ULX3 412 aaKnown RBP31.99■■■□□ 2.71
NPDC1-201ENST00000371600 WASLO00401 505 aaPredicted RBP31.98■■■□□ 2.71
NPDC1-201ENST00000371600 CPSF1Q10570 1443 aaKnown RBP31.98■■■□□ 2.71
NPDC1-201ENST00000371600 ZNF428Q96B54 188 aa31.98■■■□□ 2.71
NPDC1-201ENST00000371600 EDC4Q6P2E9 1401 aaKnown RBP31.97■■■□□ 2.71
NPDC1-201ENST00000371600 PRKAR2BP31323 418 aa31.97■■■□□ 2.71
NPDC1-201ENST00000371600 UPF2Q9HAU5 1272 aaKnown RBP31.97■■■□□ 2.71
NPDC1-201ENST00000371600 ITPRIPQ8IWB1 547 aa31.96■■■□□ 2.71
NPDC1-201ENST00000371600 LRRC7Q96NW7 1537 aa31.96■■■□□ 2.71
NPDC1-201ENST00000371600 SIRT1Q96EB6 747 aa31.95■■■□□ 2.7
NPDC1-201ENST00000371600 BECN1Q14457 450 aa31.94■■■□□ 2.7
NPDC1-201ENST00000371600 PPIP5K1Q6PFW1 1433 aa31.93■■■□□ 2.7
NPDC1-201ENST00000371600 HDGFP51858 240 aaKnown RBP31.92■■■□□ 2.7
NPDC1-201ENST00000371600 BRPF1P55201 1214 aaPredicted RBP31.92■■■□□ 2.7
NPDC1-201ENST00000371600 CALD1Q05682 793 aaKnown RBP31.92■■■□□ 2.7
NPDC1-201ENST00000371600 NFE2L2Q16236 605 aa31.92■■■□□ 2.7
NPDC1-201ENST00000371600 AATKQ6ZMQ8 1374 aa31.91■■■□□ 2.7
NPDC1-201ENST00000371600 FBLN1P23142 703 aa31.9■■■□□ 2.7
NPDC1-201ENST00000371600 TMEM57Q8N5G2 664 aa31.9■■■□□ 2.7
NPDC1-201ENST00000371600 NRXN3Q9Y4C0 1643 aa31.9■■■□□ 2.7
NPDC1-201ENST00000371600 METP08581 1390 aa31.9■■■□□ 2.7
NPDC1-201ENST00000371600 ESF1Q9H501 851 aaKnown RBP31.9■■■□□ 2.7
NPDC1-201ENST00000371600 ZBTB40Q9NUA8 1239 aa31.89■■■□□ 2.7
NPDC1-201ENST00000371600 IL13P35225 146 aa31.88■■■□□ 2.69
NPDC1-201ENST00000371600 TBC1D32Q96NH3 1257 aa31.88■■■□□ 2.69
NPDC1-201ENST00000371600 SMC5Q8IY18 1101 aa31.87■■■□□ 2.69
NPDC1-201ENST00000371600 CDK12Q9NYV4 1490 aaPredicted RBP31.87■■■□□ 2.69
NPDC1-201ENST00000371600 NUDT16Q96DE0 195 aaKnown RBP31.87■■■□□ 2.69
NPDC1-201ENST00000371600 CCDC61Q9Y6R9 512 aa31.87■■■□□ 2.69
NPDC1-201ENST00000371600 TXNDC2Q86VQ3 553 aa31.86■■■□□ 2.69
NPDC1-201ENST00000371600 TECPR2O15040 1411 aa31.86■■■□□ 2.69
NPDC1-201ENST00000371600 NME9Q86XW9 330 aa31.85■■■□□ 2.69
NPDC1-201ENST00000371600 PHACTR3Q96KR7 559 aa31.85■■■□□ 2.69
NPDC1-201ENST00000371600 EMILIN1Q9Y6C2 1016 aa31.85■■■□□ 2.69
NPDC1-201ENST00000371600 MAP2P11137 1827 aaKnown RBP31.85■■■□□ 2.69
NPDC1-201ENST00000371600 HMOX1P09601 288 aa31.84■■■□□ 2.69
NPDC1-201ENST00000371600 COG3Q96JB2 828 aa31.84■■■□□ 2.69
NPDC1-201ENST00000371600 GNAI1P63096 354 aa31.83■■■□□ 2.69
NPDC1-201ENST00000371600 IFT57Q9NWB7 429 aa31.83■■■□□ 2.69
NPDC1-201ENST00000371600 GSE1Q14687 1217 aa31.82■■■□□ 2.68
NPDC1-201ENST00000371600 ZNF692Q9BU19 519 aaPredicted RBP31.81■■■□□ 2.68
NPDC1-201ENST00000371600 CHMP4BQ9H444 224 aaKnown RBP31.81■■■□□ 2.68
NPDC1-201ENST00000371600 KNDC1Q76NI1 1749 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms