RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 XBP1P17861 261 aa11.97□□□□□ -0.49
SCAF11-202ENST00000369367 NCBP3Q53F19 620 aaKnown RBP11.97□□□□□ -0.49
SCAF11-202ENST00000369367 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
SCAF11-202ENST00000369367 AMOTL2Q9Y2J4 779 aa11.97□□□□□ -0.49
SCAF11-202ENST00000369367 ZNF428Q96B54 188 aa11.97□□□□□ -0.49
SCAF11-202ENST00000369367 TCP11L2Q8N4U5 519 aa11.97□□□□□ -0.49
SCAF11-202ENST00000369367 INTS3Q68E01 1043 aaKnown RBP11.97□□□□□ -0.49
SCAF11-202ENST00000369367 TSR1Q2NL82 804 aaKnown RBP11.96□□□□□ -0.49
SCAF11-202ENST00000369367 WASHC4Q2M389 1173 aa11.96□□□□□ -0.49
SCAF11-202ENST00000369367 BRMS1Q9HCU9 246 aa11.96□□□□□ -0.49
SCAF11-202ENST00000369367 CNNM1Q9NRU3 951 aa11.96□□□□□ -0.49
SCAF11-202ENST00000369367 CCT4P50991 539 aaKnown RBP11.96□□□□□ -0.49
SCAF11-202ENST00000369367 TPD52L1Q16890 204 aaPredicted RBP11.96□□□□□ -0.49
SCAF11-202ENST00000369367 UNC13AQ9UPW8 1703 aa11.96□□□□□ -0.49
SCAF11-202ENST00000369367 PPP2R1AP30153 589 aa11.96□□□□□ -0.5
SCAF11-202ENST00000369367 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.96□□□□□ -0.5
SCAF11-202ENST00000369367 CCDC158Q5M9N0 1113 aa11.96□□□□□ -0.5
SCAF11-202ENST00000369367 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.96□□□□□ -0.5
SCAF11-202ENST00000369367 BIVM-ERCC5R4GMW8 1640 aa11.95□□□□□ -0.5
SCAF11-202ENST00000369367 FCHSD2O94868 740 aa11.95□□□□□ -0.5
SCAF11-202ENST00000369367 MPHOSPH8Q99549 860 aa11.95□□□□□ -0.5
SCAF11-202ENST00000369367 ASXL2Q76L83 1435 aa11.95□□□□□ -0.5
SCAF11-202ENST00000369367 ANO2Q9NQ90 1003 aa11.95□□□□□ -0.5
SCAF11-202ENST00000369367 TWISTNBQ3B726 338 aaPredicted RBP11.95□□□□□ -0.5
SCAF11-202ENST00000369367 WDHD1O75717 1129 aaPredicted RBP11.94□□□□□ -0.5
SCAF11-202ENST00000369367 NBPF1Q3BBV0 1214 aa11.94□□□□□ -0.5
SCAF11-202ENST00000369367 CNTROBQ8N137 903 aa11.94□□□□□ -0.5
SCAF11-202ENST00000369367 TPM1P09493 284 aa11.94□□□□□ -0.5
SCAF11-202ENST00000369367 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
SCAF11-202ENST00000369367 PCF11O94913 1555 aaKnown RBP11.94□□□□□ -0.5
SCAF11-202ENST00000369367 ZC3H6P61129 1189 aaKnown RBP11.94□□□□□ -0.5
SCAF11-202ENST00000369367 ANKRD20A12PQ8NF67 263 aa11.94□□□□□ -0.5
SCAF11-202ENST00000369367 TPM3P06753 285 aa11.94□□□□□ -0.5
SCAF11-202ENST00000369367 PSMA5P28066 241 aa11.94□□□□□ -0.5
SCAF11-202ENST00000369367 ZSCAN25Q6NSZ9 544 aa11.94□□□□□ -0.5
SCAF11-202ENST00000369367 TMOD3Q9NYL9 352 aa11.94□□□□□ -0.5
SCAF11-202ENST00000369367 ZNF518AQ6AHZ1 1483 aa11.93□□□□□ -0.5
SCAF11-202ENST00000369367 PTPN23Q9H3S7 1636 aa11.93□□□□□ -0.5
SCAF11-202ENST00000369367 PLIN1O60240 522 aa11.93□□□□□ -0.5
SCAF11-202ENST00000369367 NOC3LQ8WTT2 800 aaKnown RBP11.93□□□□□ -0.5
SCAF11-202ENST00000369367 GNAI2P04899 355 aa11.93□□□□□ -0.5
SCAF11-202ENST00000369367 CCDC57Q2TAC2 916 aa11.93□□□□□ -0.5
SCAF11-202ENST00000369367 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
SCAF11-202ENST00000369367 WDR63Q8IWG1 891 aa11.92□□□□□ -0.5
SCAF11-202ENST00000369367 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
SCAF11-202ENST00000369367 ZPR1O75312 459 aa11.92□□□□□ -0.5
SCAF11-202ENST00000369367 IDI1Q13907 227 aa11.92□□□□□ -0.5
SCAF11-202ENST00000369367 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
SCAF11-202ENST00000369367 BTBD11A6QL63 1104 aa11.92□□□□□ -0.5
SCAF11-202ENST00000369367 WDR7Q9Y4E6 1490 aa11.92□□□□□ -0.5
SCAF11-202ENST00000369367 PLCH2O75038 1416 aa11.92□□□□□ -0.5
SCAF11-202ENST00000369367 NACAP1Q9BZK3 213 aa11.92□□□□□ -0.5
SCAF11-202ENST00000369367 SRCIN1Q9C0H9 1055 aa11.92□□□□□ -0.5
SCAF11-202ENST00000369367 FAM177BA6PVY3 158 aa11.91□□□□□ -0.5
SCAF11-202ENST00000369367 EXOC5O00471 708 aa11.91□□□□□ -0.5
SCAF11-202ENST00000369367 UHRF1BP1LA0JNW5 1464 aa11.91□□□□□ -0.5
SCAF11-202ENST00000369367 WASLO00401 505 aaPredicted RBP11.91□□□□□ -0.5
SCAF11-202ENST00000369367 MCTP1Q6DN14 999 aa11.91□□□□□ -0.5
SCAF11-202ENST00000369367 TEX13AQ9BXU3 409 aaPredicted RBP11.91□□□□□ -0.5
SCAF11-202ENST00000369367 R3HCC1Q9Y3T6 440 aaKnown RBP11.91□□□□□ -0.5
SCAF11-202ENST00000369367 GNAT3A8MTJ3 354 aa11.91□□□□□ -0.5
SCAF11-202ENST00000369367 SURF6O75683 361 aaKnown RBP11.91□□□□□ -0.5
SCAF11-202ENST00000369367 IKQ13123 557 aaPredicted RBP11.91□□□□□ -0.5
SCAF11-202ENST00000369367 TMOD2Q9NZR1 351 aa11.91□□□□□ -0.5
SCAF11-202ENST00000369367 SLKQ9H2G2 1235 aaPredicted RBP11.91□□□□□ -0.5
SCAF11-202ENST00000369367 NCOA1Q15788 1441 aa11.9□□□□□ -0.5
SCAF11-202ENST00000369367 DDX11L8A8MPP1 907 aa11.9□□□□□ -0.5
SCAF11-202ENST00000369367 CRBNQ96SW2 442 aa11.9□□□□□ -0.5
SCAF11-202ENST00000369367 UBAP1LF5GYI3 381 aa11.9□□□□□ -0.5
SCAF11-202ENST00000369367 NPHP3Q7Z494 1330 aa11.9□□□□□ -0.5
SCAF11-202ENST00000369367 IGHMBP2P38935 993 aaKnown RBP11.9□□□□□ -0.5
SCAF11-202ENST00000369367 FSD1Q9BTV5 496 aa11.9□□□□□ -0.5
SCAF11-202ENST00000369367 ABCC5O15440 1437 aa11.9□□□□□ -0.5
SCAF11-202ENST00000369367 ADAMTS8Q9UP79 889 aa11.9□□□□□ -0.51
SCAF11-202ENST00000369367 TTC39AQ5SRH9 613 aa11.89□□□□□ -0.51
SCAF11-202ENST00000369367 KRT28Q7Z3Y7 464 aa11.89□□□□□ -0.51
SCAF11-202ENST00000369367 RAPGEF6Q8TEU7 1601 aa11.89□□□□□ -0.51
SCAF11-202ENST00000369367 CEBPAP49715 358 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-202ENST00000369367 KDM5BQ9UGL1 1544 aa11.89□□□□□ -0.51
SCAF11-202ENST00000369367 NAIPQ13075 1403 aa11.89□□□□□ -0.51
SCAF11-202ENST00000369367 ADAMTS2O95450 1211 aa11.89□□□□□ -0.51
SCAF11-202ENST00000369367 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-202ENST00000369367 CREBRFQ8IUR6 639 aa11.89□□□□□ -0.51
SCAF11-202ENST00000369367 FOXO3O43524 673 aa11.88□□□□□ -0.51
SCAF11-202ENST00000369367 TTC21BQ7Z4L5 1316 aa11.88□□□□□ -0.51
SCAF11-202ENST00000369367 ITSN2Q9NZM3 1697 aa11.88□□□□□ -0.51
SCAF11-202ENST00000369367 SLC4A2P04920 1241 aa11.88□□□□□ -0.51
SCAF11-202ENST00000369367 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
SCAF11-202ENST00000369367 SKOR2Q2VWA4 1001 aaPredicted RBP11.88□□□□□ -0.51
SCAF11-202ENST00000369367 A2MP01023 1474 aa11.88□□□□□ -0.51
SCAF11-202ENST00000369367 GOLGA6L19H0YKK7 550 aa11.88□□□□□ -0.51
SCAF11-202ENST00000369367 CNKSR2Q8WXI2 1034 aa11.88□□□□□ -0.51
SCAF11-202ENST00000369367 NSD2O96028 1365 aa11.87□□□□□ -0.51
SCAF11-202ENST00000369367 FYB1O15117 783 aa11.87□□□□□ -0.51
SCAF11-202ENST00000369367 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-202ENST00000369367 GCC1Q96CN9 775 aa11.87□□□□□ -0.51
SCAF11-202ENST00000369367 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
SCAF11-202ENST00000369367 PES1O00541 588 aaKnown RBP11.87□□□□□ -0.51
SCAF11-202ENST00000369367 CEP126Q9P2H0 1117 aa11.87□□□□□ -0.51
SCAF11-202ENST00000369367 NFE2L2Q16236 605 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms