RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 TERF2IPQ9NYB0 399 aa35.14■■■■□ 3.22
EFNA1-202ENST00000368407 ACEP12821 1306 aa35.12■■■■□ 3.21
EFNA1-202ENST00000368407 HDGFL2Q7Z4V5 671 aaPredicted RBP35.12■■■■□ 3.21
EFNA1-202ENST00000368407 ITSN1Q15811 1721 aa35.12■■■■□ 3.21
EFNA1-202ENST00000368407 CPSF1Q10570 1443 aaKnown RBP35.11■■■■□ 3.21
EFNA1-202ENST00000368407 RALBP1Q15311 655 aa35.1■■■■□ 3.21
EFNA1-202ENST00000368407 PHF8Q9UPP1 1060 aa35.1■■■■□ 3.21
EFNA1-202ENST00000368407 NSD3Q9BZ95 1437 aa35.09■■■■□ 3.21
EFNA1-202ENST00000368407 INSRP06213 1382 aa35.09■■■■□ 3.21
EFNA1-202ENST00000368407 CCDC136Q96JN2 1154 aa35.08■■■■□ 3.21
EFNA1-202ENST00000368407 KNSTRNQ9Y448 316 aa35.08■■■■□ 3.21
EFNA1-202ENST00000368407 CNGB1Q14028 1251 aaPredicted RBP35.07■■■■□ 3.2
EFNA1-202ENST00000368407 NGDNQ8NEJ9 315 aaKnown RBP35.07■■■■□ 3.2
EFNA1-202ENST00000368407 SLAIN2Q9P270 581 aa35.06■■■■□ 3.2
EFNA1-202ENST00000368407 POLR3AO14802 1390 aaPredicted RBP35.06■■■■□ 3.2
EFNA1-202ENST00000368407 MYBBP1AQ9BQG0 1328 aaKnown RBP35.06■■■■□ 3.2
EFNA1-202ENST00000368407 ZNF692Q9BU19 519 aaPredicted RBP35.02■■■■□ 3.2
EFNA1-202ENST00000368407 AMER1Q5JTC6 1135 aaPredicted RBP35.02■■■■□ 3.2
EFNA1-202ENST00000368407 AKAP12Q02952 1782 aa35■■■■□ 3.19
EFNA1-202ENST00000368407 FOXO3O43524 673 aa34.99■■■■□ 3.19
EFNA1-202ENST00000368407 ANP32AP39687 249 aaKnown RBP34.99■■■■□ 3.19
EFNA1-202ENST00000368407 USP6P35125 1406 aa34.99■■■■□ 3.19
EFNA1-202ENST00000368407 CC2D1BQ5T0F9 858 aaKnown RBP34.98■■■■□ 3.19
EFNA1-202ENST00000368407 BRINP3Q76B58 766 aa34.98■■■■□ 3.19
EFNA1-202ENST00000368407 IPO9Q96P70 1041 aaKnown RBP34.98■■■■□ 3.19
EFNA1-202ENST00000368407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.97■■■■□ 3.19
EFNA1-202ENST00000368407 PDE3BQ13370 1112 aa34.96■■■■□ 3.19
EFNA1-202ENST00000368407 EDC4Q6P2E9 1401 aaKnown RBP34.96■■■■□ 3.19
EFNA1-202ENST00000368407 MON2Q7Z3U7 1717 aa34.96■■■■□ 3.19
EFNA1-202ENST00000368407 DDX17Q92841 729 aaKnown RBP34.94■■■■□ 3.18
EFNA1-202ENST00000368407 CGNL1Q0VF96 1302 aa34.94■■■■□ 3.18
EFNA1-202ENST00000368407 CERKQ8TCT0 537 aa34.93■■■■□ 3.18
EFNA1-202ENST00000368407 XPCQ01831 940 aaPredicted RBP34.93■■■■□ 3.18
EFNA1-202ENST00000368407 KIF1AQ12756 1690 aa34.92■■■■□ 3.18
EFNA1-202ENST00000368407 SSH2Q76I76 1423 aa34.92■■■■□ 3.18
EFNA1-202ENST00000368407 PSME1Q06323 249 aa34.92■■■■□ 3.18
EFNA1-202ENST00000368407 PARD3Q8TEW0 1356 aa34.92■■■■□ 3.18
EFNA1-202ENST00000368407 TTC21BQ7Z4L5 1316 aa34.91■■■■□ 3.18
EFNA1-202ENST00000368407 NRKQ7Z2Y5 1582 aa34.9■■■■□ 3.18
EFNA1-202ENST00000368407 FYB1O15117 783 aa34.9■■■■□ 3.18
EFNA1-202ENST00000368407 DEKP35659 375 aaKnown RBP34.89■■■■□ 3.18
EFNA1-202ENST00000368407 NPC1L1Q9UHC9 1359 aa34.89■■■■□ 3.18
EFNA1-202ENST00000368407 NME9Q86XW9 330 aa34.88■■■■□ 3.17
EFNA1-202ENST00000368407 GGNBP2Q9H3C7 697 aa34.88■■■■□ 3.17
EFNA1-202ENST00000368407 RRP1P56182 461 aaKnown RBP34.87■■■■□ 3.17
EFNA1-202ENST00000368407 IQSEC2Q5JU85 1478 aa34.86■■■■□ 3.17
EFNA1-202ENST00000368407 KRT28Q7Z3Y7 464 aa34.85■■■■□ 3.17
EFNA1-202ENST00000368407 ZRANB1Q9UGI0 708 aa34.85■■■■□ 3.17
EFNA1-202ENST00000368407 TCERG1O14776 1098 aaKnown RBP34.84■■■■□ 3.17
EFNA1-202ENST00000368407 TOM1O60784 492 aa34.84■■■■□ 3.17
EFNA1-202ENST00000368407 PAK3O75914 559 aaPredicted RBP34.84■■■■□ 3.17
EFNA1-202ENST00000368407 NLRP13Q86W25 1043 aa34.84■■■■□ 3.17
EFNA1-202ENST00000368407 NPHP3Q7Z494 1330 aa34.84■■■■□ 3.17
EFNA1-202ENST00000368407 UBAP1LF5GYI3 381 aa34.82■■■■□ 3.16
EFNA1-202ENST00000368407 TTC21AQ8NDW8 1320 aa34.81■■■■□ 3.16
EFNA1-202ENST00000368407 NSD2O96028 1365 aa34.8■■■■□ 3.16
EFNA1-202ENST00000368407 MS4A1P11836 297 aa34.79■■■■□ 3.16
EFNA1-202ENST00000368407 PIP4K2BP78356 416 aa34.79■■■■□ 3.16
EFNA1-202ENST00000368407 ROBO1Q9Y6N7 1651 aa34.78■■■■□ 3.16
EFNA1-202ENST00000368407 PXDNQ92626 1479 aa34.78■■■■□ 3.16
EFNA1-202ENST00000368407 MORC1Q86VD1 984 aa34.77■■■■□ 3.16
EFNA1-202ENST00000368407 ZBTB47Q9UFB7 747 aaPredicted RBP34.77■■■■□ 3.16
EFNA1-202ENST00000368407 KIF20BQ96Q89 1820 aa34.77■■■■□ 3.16
EFNA1-202ENST00000368407 BLMP54132 1417 aaPredicted RBP34.76■■■■□ 3.15
EFNA1-202ENST00000368407 NUTM2GQ5VZR2 741 aa34.75■■■■□ 3.15
EFNA1-202ENST00000368407 ABTB2Q8N961 1025 aa34.75■■■■□ 3.15
EFNA1-202ENST00000368407 RCAN3Q9UKA8 241 aa34.75■■■■□ 3.15
EFNA1-202ENST00000368407 TRPM3Q9HCF6 1732 aaPredicted RBP34.74■■■■□ 3.15
EFNA1-202ENST00000368407 TNNT2P45379 298 aaPredicted RBP34.74■■■■□ 3.15
EFNA1-202ENST00000368407 PIK3C2AO00443 1686 aa34.74■■■■□ 3.15
EFNA1-202ENST00000368407 SOS2Q07890 1332 aaPredicted RBP34.72■■■■□ 3.15
EFNA1-202ENST00000368407 COG3Q96JB2 828 aa34.71■■■■□ 3.15
EFNA1-202ENST00000368407 OVOS2A0A0J9YW53 1432 aa34.7■■■■□ 3.15
EFNA1-202ENST00000368407 OVOS2Q6IE36 1432 aa34.7■■■■□ 3.15
EFNA1-202ENST00000368407 NLRP6P59044 892 aa34.7■■■■□ 3.15
EFNA1-202ENST00000368407 LMOD2Q6P5Q4 547 aa34.7■■■■□ 3.15
EFNA1-202ENST00000368407 NHSL1Q5SYE7 1610 aa34.7■■■■□ 3.15
EFNA1-202ENST00000368407 SBNO1A3KN83 1393 aa34.69■■■■□ 3.14
EFNA1-202ENST00000368407 USP31Q70CQ4 1352 aa34.68■■■■□ 3.14
EFNA1-202ENST00000368407 ANKRD26Q9UPS8 1709 aa34.68■■■■□ 3.14
EFNA1-202ENST00000368407 FBLN1P23142 703 aa34.66■■■■□ 3.14
EFNA1-202ENST00000368407 PPP2R1AP30153 589 aa34.66■■■■□ 3.14
EFNA1-202ENST00000368407 SPATA31A3Q5VYP0 1347 aa34.66■■■■□ 3.14
EFNA1-202ENST00000368407 TNS3Q68CZ2 1445 aa34.65■■■■□ 3.14
EFNA1-202ENST00000368407 RTL5Q5HYW3 569 aaPredicted RBP34.63■■■■□ 3.13
EFNA1-202ENST00000368407 AHDC1Q5TGY3 1603 aaPredicted RBP34.63■■■■□ 3.13
EFNA1-202ENST00000368407 ALS2Q96Q42 1657 aa34.63■■■■□ 3.13
EFNA1-202ENST00000368407 PLEKHG5O94827 1062 aa34.61■■■■□ 3.13
EFNA1-202ENST00000368407 SOX12O15370 315 aa34.61■■■■□ 3.13
EFNA1-202ENST00000368407 EXOC6Q8TAG9 804 aa34.6■■■■□ 3.13
EFNA1-202ENST00000368407 MARF1Q9Y4F3 1742 aaKnown RBP34.6■■■■□ 3.13
EFNA1-202ENST00000368407 USP35Q9P2H5 1018 aa34.58■■■■□ 3.13
EFNA1-202ENST00000368407 BACH2Q9BYV9 841 aa34.56■■■■□ 3.12
EFNA1-202ENST00000368407 USP54Q70EL1 1684 aa34.56■■■■□ 3.12
EFNA1-202ENST00000368407 NBR1Q14596 966 aa34.55■■■■□ 3.12
EFNA1-202ENST00000368407 ARHGEF10O15013 1369 aa34.55■■■■□ 3.12
EFNA1-202ENST00000368407 USP19O94966 1318 aa34.53■■■■□ 3.12
EFNA1-202ENST00000368407 PDE4AP27815 886 aa34.53■■■■□ 3.12
EFNA1-202ENST00000368407 RRS1Q15050 365 aaKnown RBP34.53■■■■□ 3.12
EFNA1-202ENST00000368407 AATKQ6ZMQ8 1374 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms