RNA–Protein interactions for RNA: ENST00000368198.7

SH2D2A-201, Transcript of SH2 domain containing 2A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SH2D2A, Length 1,599 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2A-201ENST00000368198 DDX17Q92841 729 aaKnown RBP24.33■■□□□ 1.49
SH2D2A-201ENST00000368198 NSD2O96028 1365 aa24.33■■□□□ 1.49
SH2D2A-201ENST00000368198 ACEP12821 1306 aa24.33■■□□□ 1.48
SH2D2A-201ENST00000368198 FOXO3O43524 673 aa24.32■■□□□ 1.48
SH2D2A-201ENST00000368198 NGDNQ8NEJ9 315 aaKnown RBP24.32■■□□□ 1.48
SH2D2A-201ENST00000368198 BLMP54132 1417 aaPredicted RBP24.31■■□□□ 1.48
SH2D2A-201ENST00000368198 ROBO1Q9Y6N7 1651 aa24.3■■□□□ 1.48
SH2D2A-201ENST00000368198 TERF2IPQ9NYB0 399 aa24.29■■□□□ 1.48
SH2D2A-201ENST00000368198 CD163L1Q9NR16 1453 aa24.29■■□□□ 1.48
SH2D2A-201ENST00000368198 A0A1W2PP64 1363 aa24.28■■□□□ 1.48
SH2D2A-201ENST00000368198 NEFLP07196 543 aa24.28■■□□□ 1.48
SH2D2A-201ENST00000368198 XPCQ01831 940 aaPredicted RBP24.28■■□□□ 1.48
SH2D2A-201ENST00000368198 POLR3AO14802 1390 aaPredicted RBP24.28■■□□□ 1.48
SH2D2A-201ENST00000368198 KIF1AQ12756 1690 aa24.27■■□□□ 1.48
SH2D2A-201ENST00000368198 MORC1Q86VD1 984 aa24.27■■□□□ 1.48
SH2D2A-201ENST00000368198 SUPT16HQ9Y5B9 1047 aaKnown RBP24.27■■□□□ 1.48
SH2D2A-201ENST00000368198 PSME1Q06323 249 aa24.25■■□□□ 1.47
SH2D2A-201ENST00000368198 WDR43Q15061 677 aaKnown RBP eCLIP24.25■■□□□ 1.47
SH2D2A-201ENST00000368198 CPSF1Q10570 1443 aaKnown RBP24.25■■□□□ 1.47
SH2D2A-201ENST00000368198 SMG6Q86US8 1419 aaKnown RBP24.25■■□□□ 1.47
SH2D2A-201ENST00000368198 HDGFL2Q7Z4V5 671 aaPredicted RBP24.25■■□□□ 1.47
SH2D2A-201ENST00000368198 KRT28Q7Z3Y7 464 aa24.24■■□□□ 1.47
SH2D2A-201ENST00000368198 ZNF692Q9BU19 519 aaPredicted RBP24.23■■□□□ 1.47
SH2D2A-201ENST00000368198 NPHP3Q7Z494 1330 aa24.23■■□□□ 1.47
SH2D2A-201ENST00000368198 AKAP12Q02952 1782 aa24.22■■□□□ 1.47
SH2D2A-201ENST00000368198 ADAMTS8Q9UP79 889 aa24.2■■□□□ 1.47
SH2D2A-201ENST00000368198 NHSL1Q5SYE7 1610 aa24.2■■□□□ 1.46
SH2D2A-201ENST00000368198 USP6P35125 1406 aa24.2■■□□□ 1.46
SH2D2A-201ENST00000368198 NUDCQ9Y266 331 aa24.2■■□□□ 1.46
SH2D2A-201ENST00000368198 FKBP8Q14318 412 aa24.19■■□□□ 1.46
SH2D2A-201ENST00000368198 PXDNQ92626 1479 aa24.18■■□□□ 1.46
SH2D2A-201ENST00000368198 SOS2Q07890 1332 aaPredicted RBP24.18■■□□□ 1.46
SH2D2A-201ENST00000368198 ANKRD26Q9UPS8 1709 aa24.17■■□□□ 1.46
SH2D2A-201ENST00000368198 PAK3O75914 559 aaPredicted RBP24.17■■□□□ 1.46
SH2D2A-201ENST00000368198 PDE3BQ13370 1112 aa24.17■■□□□ 1.46
SH2D2A-201ENST00000368198 AHDC1Q5TGY3 1603 aaPredicted RBP24.17■■□□□ 1.46
SH2D2A-201ENST00000368198 MON2Q7Z3U7 1717 aa24.17■■□□□ 1.46
SH2D2A-201ENST00000368198 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.16■■□□□ 1.46
SH2D2A-201ENST00000368198 TTC21BQ7Z4L5 1316 aa24.16■■□□□ 1.46
SH2D2A-201ENST00000368198 SSH2Q76I76 1423 aa24.16■■□□□ 1.46
SH2D2A-201ENST00000368198 EDC4Q6P2E9 1401 aaKnown RBP24.14■■□□□ 1.46
SH2D2A-201ENST00000368198 FBXO41Q8TF61 875 aa24.14■■□□□ 1.45
SH2D2A-201ENST00000368198 PHLPP1O60346 1717 aa24.14■■□□□ 1.45
SH2D2A-201ENST00000368198 TRPM3Q9HCF6 1732 aaPredicted RBP24.13■■□□□ 1.45
SH2D2A-201ENST00000368198 NRKQ7Z2Y5 1582 aa24.12■■□□□ 1.45
SH2D2A-201ENST00000368198 KIF20BQ96Q89 1820 aa24.12■■□□□ 1.45
SH2D2A-201ENST00000368198 HSPA1LP34931 641 aa24.12■■□□□ 1.45
SH2D2A-201ENST00000368198 SBNO1A3KN83 1393 aa24.11■■□□□ 1.45
SH2D2A-201ENST00000368198 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
SH2D2A-201ENST00000368198 SENP3-EIF4A1A0A087X0R7 540 aa24.11■■□□□ 1.45
SH2D2A-201ENST00000368198 FYB1O15117 783 aa24.11■■□□□ 1.45
SH2D2A-201ENST00000368198 TNNT2P45379 298 aaPredicted RBP24.11■■□□□ 1.45
SH2D2A-201ENST00000368198 LMOD2Q6P5Q4 547 aa24.11■■□□□ 1.45
SH2D2A-201ENST00000368198 CFAP53Q96M91 514 aa24.11■■□□□ 1.45
SH2D2A-201ENST00000368198 NME9Q86XW9 330 aa24.1■■□□□ 1.45
SH2D2A-201ENST00000368198 ZRANB1Q9UGI0 708 aa24.1■■□□□ 1.45
SH2D2A-201ENST00000368198 COL16A1Q07092 1604 aaPredicted RBP24.1■■□□□ 1.45
SH2D2A-201ENST00000368198 NUTM2GQ5VZR2 741 aa24.09■■□□□ 1.45
SH2D2A-201ENST00000368198 MTHFSP49914 203 aa24.08■■□□□ 1.45
SH2D2A-201ENST00000368198 ABTB2Q8N961 1025 aa24.08■■□□□ 1.45
SH2D2A-201ENST00000368198 LRRC59Q96AG4 307 aaKnown RBP24.08■■□□□ 1.45
SH2D2A-201ENST00000368198 GGNBP2Q9H3C7 697 aa24.08■■□□□ 1.45
SH2D2A-201ENST00000368198 SHPRHQ149N8 1683 aa24.08■■□□□ 1.45
SH2D2A-201ENST00000368198 TTC21AQ8NDW8 1320 aa24.08■■□□□ 1.45
SH2D2A-201ENST00000368198 TNS3Q68CZ2 1445 aa24.08■■□□□ 1.44
SH2D2A-201ENST00000368198 SALL2Q9Y467 1007 aaPredicted RBP24.07■■□□□ 1.44
SH2D2A-201ENST00000368198 PLEKHG5O94827 1062 aa24.06■■□□□ 1.44
SH2D2A-201ENST00000368198 ALS2Q96Q42 1657 aa24.05■■□□□ 1.44
SH2D2A-201ENST00000368198 PIK3C2AO00443 1686 aa24.04■■□□□ 1.44
SH2D2A-201ENST00000368198 ERICH6BQ5W0A0 696 aa24.04■■□□□ 1.44
SH2D2A-201ENST00000368198 NLRP6P59044 892 aa24.03■■□□□ 1.44
SH2D2A-201ENST00000368198 NGEFQ8N5V2 710 aa24.03■■□□□ 1.44
SH2D2A-201ENST00000368198 ARHGEF10O15013 1369 aa24.01■■□□□ 1.43
SH2D2A-201ENST00000368198 CABLES1Q8TDN4 633 aa24■■□□□ 1.43
SH2D2A-201ENST00000368198 RNF123Q5XPI4 1314 aa24■■□□□ 1.43
SH2D2A-201ENST00000368198 PNPLA6Q8IY17 1366 aa24■■□□□ 1.43
SH2D2A-201ENST00000368198 USP31Q70CQ4 1352 aa23.99■■□□□ 1.43
SH2D2A-201ENST00000368198 CCDC146Q8IYE0 955 aa23.99■■□□□ 1.43
SH2D2A-201ENST00000368198 ZNF521Q96K83 1311 aa23.98■■□□□ 1.43
SH2D2A-201ENST00000368198 COG3Q96JB2 828 aa23.98■■□□□ 1.43
SH2D2A-201ENST00000368198 COL3A1P02461 1466 aaPredicted RBP23.97■■□□□ 1.43
SH2D2A-201ENST00000368198 MARF1Q9Y4F3 1742 aaKnown RBP23.96■■□□□ 1.43
SH2D2A-201ENST00000368198 OVOS2A0A0J9YW53 1432 aa23.96■■□□□ 1.43
SH2D2A-201ENST00000368198 OVOS2Q6IE36 1432 aa23.96■■□□□ 1.43
SH2D2A-201ENST00000368198 APAF1O14727 1248 aa23.95■■□□□ 1.43
SH2D2A-201ENST00000368198 CDCA7LQ96GN5 454 aa23.95■■□□□ 1.43
SH2D2A-201ENST00000368198 JCADQ9P266 1359 aa23.95■■□□□ 1.43
SH2D2A-201ENST00000368198 MED1Q15648 1581 aaPredicted RBP23.95■■□□□ 1.42
SH2D2A-201ENST00000368198 SOX12O15370 315 aa23.95■■□□□ 1.42
SH2D2A-201ENST00000368198 RUNDC1Q96C34 613 aa23.95■■□□□ 1.42
SH2D2A-201ENST00000368198 USP19O94966 1318 aa23.94■■□□□ 1.42
SH2D2A-201ENST00000368198 FBLN1P23142 703 aa23.94■■□□□ 1.42
SH2D2A-201ENST00000368198 IRX6P78412 446 aaPredicted RBP23.93■■□□□ 1.42
SH2D2A-201ENST00000368198 GOLGA2Q08379 1002 aa23.92■■□□□ 1.42
SH2D2A-201ENST00000368198 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
SH2D2A-201ENST00000368198 COL22A1Q8NFW1 1626 aaPredicted RBP23.92■■□□□ 1.42
SH2D2A-201ENST00000368198 USP54Q70EL1 1684 aa23.91■■□□□ 1.42
SH2D2A-201ENST00000368198 GCP02774 474 aa23.91■■□□□ 1.42
SH2D2A-201ENST00000368198 AATKQ6ZMQ8 1374 aa23.91■■□□□ 1.42
SH2D2A-201ENST00000368198 RCAN3Q9UKA8 241 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms