RNA–Protein interactions for RNA: ENST00000367165.3

CLDN20-201, Transcript of claudin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN20, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20-201ENST00000367165 PXDNQ92626 1479 aa13.92□□□□□ -0.18
CLDN20-201ENST00000367165 CCDC144AA2RUR9 1427 aa13.91□□□□□ -0.18
CLDN20-201ENST00000367165 ATRNO75882 1429 aa13.91□□□□□ -0.18
CLDN20-201ENST00000367165 ESCO1Q5FWF5 840 aa13.9□□□□□ -0.18
CLDN20-201ENST00000367165 CDAN1Q8IWY9 1227 aa13.9□□□□□ -0.18
CLDN20-201ENST00000367165 LRPPRCP42704 1394 aaKnown RBP13.89□□□□□ -0.19
CLDN20-201ENST00000367165 ANKRD30BQ9BXX2 1392 aa13.89□□□□□ -0.19
CLDN20-201ENST00000367165 ADGRF5Q8IZF2 1346 aa13.89□□□□□ -0.19
CLDN20-201ENST00000367165 MS4A3Q96HJ5 214 aa13.88□□□□□ -0.19
CLDN20-201ENST00000367165 SPATA31E1Q6ZUB1 1445 aa13.88□□□□□ -0.19
CLDN20-201ENST00000367165 PIK3C2GO75747 1445 aa13.87□□□□□ -0.19
CLDN20-201ENST00000367165 ABCC11Q96J66 1382 aa13.86□□□□□ -0.19
CLDN20-201ENST00000367165 SRCAPQ6ZRS2 3230 aa13.86□□□□□ -0.19
CLDN20-201ENST00000367165 FOXO3O43524 673 aa13.86□□□□□ -0.19
CLDN20-201ENST00000367165 KNDC1Q76NI1 1749 aa13.86□□□□□ -0.19
CLDN20-201ENST00000367165 BCL9LQ86UU0 1499 aa13.86□□□□□ -0.19
CLDN20-201ENST00000367165 VASPP50552 380 aaPredicted RBP13.85□□□□□ -0.19
CLDN20-201ENST00000367165 XPCQ01831 940 aaPredicted RBP13.85□□□□□ -0.19
CLDN20-201ENST00000367165 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
CLDN20-201ENST00000367165 STK26Q9P289 416 aa13.85□□□□□ -0.19
CLDN20-201ENST00000367165 RGL3Q3MIN7 710 aa13.84□□□□□ -0.19
CLDN20-201ENST00000367165 KIF1AQ12756 1690 aa13.84□□□□□ -0.19
CLDN20-201ENST00000367165 IFT172Q9UG01 1749 aa13.84□□□□□ -0.19
CLDN20-201ENST00000367165 PLEKHH1Q9ULM0 1364 aa13.83□□□□□ -0.19
CLDN20-201ENST00000367165 EP400Q96L91 3159 aa13.83□□□□□ -0.19
CLDN20-201ENST00000367165 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
CLDN20-201ENST00000367165 RASEFQ8IZ41 740 aa13.83□□□□□ -0.2
CLDN20-201ENST00000367165 CCDC61Q9Y6R9 512 aa13.83□□□□□ -0.2
CLDN20-201ENST00000367165 YTHDC2Q9H6S0 1430 aaKnown RBP13.82□□□□□ -0.2
CLDN20-201ENST00000367165 FMN2Q9NZ56 1722 aa13.82□□□□□ -0.2
CLDN20-201ENST00000367165 NUTM2FA1L443 756 aa13.82□□□□□ -0.2
CLDN20-201ENST00000367165 NUBP1P53384 320 aa13.82□□□□□ -0.2
CLDN20-201ENST00000367165 SPATA31A3Q5VYP0 1347 aa13.82□□□□□ -0.2
CLDN20-201ENST00000367165 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.81□□□□□ -0.2
CLDN20-201ENST00000367165 MARF1Q9Y4F3 1742 aaKnown RBP13.81□□□□□ -0.2
CLDN20-201ENST00000367165 SLIT2O94813 1529 aa13.81□□□□□ -0.2
CLDN20-201ENST00000367165 CCDC125Q86Z20 511 aa13.81□□□□□ -0.2
CLDN20-201ENST00000367165 GJD4Q96KN9 370 aaPredicted RBP13.81□□□□□ -0.2
CLDN20-201ENST00000367165 USP32Q8NFA0 1604 aa13.8□□□□□ -0.2
CLDN20-201ENST00000367165 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
CLDN20-201ENST00000367165 MPHOSPH9Q99550 1183 aa13.8□□□□□ -0.2
CLDN20-201ENST00000367165 TNS3Q68CZ2 1445 aa13.8□□□□□ -0.2
CLDN20-201ENST00000367165 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
CLDN20-201ENST00000367165 UNC5CLQ8IV45 518 aa13.79□□□□□ -0.2
CLDN20-201ENST00000367165 SIRT1Q96EB6 747 aa13.78□□□□□ -0.2
CLDN20-201ENST00000367165 NRXN1Q9ULB1 1477 aa13.78□□□□□ -0.2
CLDN20-201ENST00000367165 GLI3P10071 1580 aa13.78□□□□□ -0.2
CLDN20-201ENST00000367165 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
CLDN20-201ENST00000367165 BLMP54132 1417 aaPredicted RBP13.77□□□□□ -0.21
CLDN20-201ENST00000367165 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.21
CLDN20-201ENST00000367165 ACIN1Q9UKV3 1341 aaKnown RBP13.76□□□□□ -0.21
CLDN20-201ENST00000367165 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
CLDN20-201ENST00000367165 ATN1P54259 1190 aaPredicted RBP13.76□□□□□ -0.21
CLDN20-201ENST00000367165 PHF8Q9UPP1 1060 aa13.76□□□□□ -0.21
CLDN20-201ENST00000367165 SBNO1A3KN83 1393 aa13.75□□□□□ -0.21
CLDN20-201ENST00000367165 ARHGEF10O15013 1369 aa13.75□□□□□ -0.21
CLDN20-201ENST00000367165 DHX57Q6P158 1386 aaKnown RBP13.75□□□□□ -0.21
CLDN20-201ENST00000367165 PSME1Q06323 249 aa13.75□□□□□ -0.21
CLDN20-201ENST00000367165 C14orf93Q9H972 538 aaKnown RBP13.75□□□□□ -0.21
CLDN20-201ENST00000367165 ANKARQ7Z5J8 1434 aa13.74□□□□□ -0.21
CLDN20-201ENST00000367165 DLC1Q96QB1 1528 aa13.74□□□□□ -0.21
CLDN20-201ENST00000367165 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
CLDN20-201ENST00000367165 ADGRB2O60241 1585 aa13.73□□□□□ -0.21
CLDN20-201ENST00000367165 VPS72Q15906 364 aa13.72□□□□□ -0.21
CLDN20-201ENST00000367165 CFAP70Q5T0N1 1121 aa13.72□□□□□ -0.21
CLDN20-201ENST00000367165 KIF12Q96FN5 646 aa13.72□□□□□ -0.21
CLDN20-201ENST00000367165 ABCA3Q99758 1704 aa13.71□□□□□ -0.21
CLDN20-201ENST00000367165 NWD2Q9ULI1 1742 aa13.71□□□□□ -0.21
CLDN20-201ENST00000367165 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
CLDN20-201ENST00000367165 PLCH1Q4KWH8 1693 aa13.71□□□□□ -0.21
CLDN20-201ENST00000367165 SF3B2Q13435 895 aaKnown RBP13.7□□□□□ -0.22
CLDN20-201ENST00000367165 SAFB2Q14151 953 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLDN20-201ENST00000367165 SEPT12Q8IYM1 358 aa13.7□□□□□ -0.22
CLDN20-201ENST00000367165 CABLES1Q8TDN4 633 aa13.7□□□□□ -0.22
CLDN20-201ENST00000367165 EIF3AQ14152 1382 aaKnown RBP13.7□□□□□ -0.22
CLDN20-201ENST00000367165 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
CLDN20-201ENST00000367165 POGKQ9P215 609 aa13.69□□□□□ -0.22
CLDN20-201ENST00000367165 CCDC9Q9Y3X0 531 aaKnown RBP13.69□□□□□ -0.22
CLDN20-201ENST00000367165 ADGRB1O14514 1584 aa13.69□□□□□ -0.22
CLDN20-201ENST00000367165 ONECUT3O60422 494 aaPredicted RBP13.68□□□□□ -0.22
CLDN20-201ENST00000367165 MMRN1Q13201 1228 aa13.67□□□□□ -0.22
CLDN20-201ENST00000367165 KRT27Q7Z3Y8 459 aa13.67□□□□□ -0.22
CLDN20-201ENST00000367165 DEFB132Q7Z7B7 95 aa13.67□□□□□ -0.22
CLDN20-201ENST00000367165 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
CLDN20-201ENST00000367165 GPRASP1Q5JY77 1395 aa13.67□□□□□ -0.22
CLDN20-201ENST00000367165 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
CLDN20-201ENST00000367165 TULP4Q9NRJ4 1543 aa13.66□□□□□ -0.22
CLDN20-201ENST00000367165 PMFBP1Q8TBY8 1022 aa13.66□□□□□ -0.22
CLDN20-201ENST00000367165 BRWD3Q6RI45 1802 aa13.66□□□□□ -0.22
CLDN20-201ENST00000367165 TRPM3Q9HCF6 1732 aaPredicted RBP13.65□□□□□ -0.22
CLDN20-201ENST00000367165 A0A0G2JS52 829 aa13.65□□□□□ -0.22
CLDN20-201ENST00000367165 FAM83GA6ND36 823 aa13.65□□□□□ -0.22
CLDN20-201ENST00000367165 MYT1Q01538 1121 aa13.65□□□□□ -0.22
CLDN20-201ENST00000367165 RAB3GAP2Q9H2M9 1393 aa13.65□□□□□ -0.22
CLDN20-201ENST00000367165 NRAPQ86VF7 1730 aa13.64□□□□□ -0.23
CLDN20-201ENST00000367165 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
CLDN20-201ENST00000367165 MAP3K13O43283 966 aa13.63□□□□□ -0.23
CLDN20-201ENST00000367165 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
CLDN20-201ENST00000367165 HIRIP3Q9BW71 556 aaPredicted RBP13.63□□□□□ -0.23
CLDN20-201ENST00000367165 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms