RNA–Protein interactions for RNA: ENST00000361543.3

SGMS1-201, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene SGMS1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-201ENST00000361543 COL14A1Q05707 1796 aaKnown RBP10.99□□□□□ -0.65
SGMS1-201ENST00000361543 RBM6P78332 1123 aaKnown RBP10.99□□□□□ -0.65
SGMS1-201ENST00000361543 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
SGMS1-201ENST00000361543 FNBP4Q8N3X1 1017 aaPredicted RBP10.99□□□□□ -0.65
SGMS1-201ENST00000361543 NGDNQ8NEJ9 315 aaKnown RBP10.99□□□□□ -0.65
SGMS1-201ENST00000361543 CDK19Q9BWU1 502 aa10.99□□□□□ -0.65
SGMS1-201ENST00000361543 TONSLQ96HA7 1378 aa10.99□□□□□ -0.65
SGMS1-201ENST00000361543 SLIT2O94813 1529 aa10.99□□□□□ -0.65
SGMS1-201ENST00000361543 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
SGMS1-201ENST00000361543 POLR3AO14802 1390 aaPredicted RBP10.98□□□□□ -0.65
SGMS1-201ENST00000361543 RALGAPBQ86X10 1494 aa10.98□□□□□ -0.65
SGMS1-201ENST00000361543 GLI3P10071 1580 aa10.98□□□□□ -0.65
SGMS1-201ENST00000361543 AKAP12Q02952 1782 aa10.98□□□□□ -0.65
SGMS1-201ENST00000361543 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
SGMS1-201ENST00000361543 CABLES1Q8TDN4 633 aa10.97□□□□□ -0.65
SGMS1-201ENST00000361543 TRPC5Q9UL62 973 aaPredicted RBP10.97□□□□□ -0.65
SGMS1-201ENST00000361543 PPIP5K1Q6PFW1 1433 aa10.97□□□□□ -0.65
SGMS1-201ENST00000361543 BRWD3Q6RI45 1802 aa10.96□□□□□ -0.65
SGMS1-201ENST00000361543 SRPK2P78362 688 aaKnown RBP10.96□□□□□ -0.65
SGMS1-201ENST00000361543 NRKQ7Z2Y5 1582 aa10.95□□□□□ -0.66
SGMS1-201ENST00000361543 ACEP12821 1306 aa10.95□□□□□ -0.66
SGMS1-201ENST00000361543 PAK3O75914 559 aaPredicted RBP10.95□□□□□ -0.66
SGMS1-201ENST00000361543 NBPF8Q3BBV2 869 aa10.95□□□□□ -0.66
SGMS1-201ENST00000361543 CCDC61Q9Y6R9 512 aa10.95□□□□□ -0.66
SGMS1-201ENST00000361543 PIK3C2AO00443 1686 aa10.94□□□□□ -0.66
SGMS1-201ENST00000361543 MON2Q7Z3U7 1717 aa10.93□□□□□ -0.66
SGMS1-201ENST00000361543 EVC2Q86UK5 1308 aa10.93□□□□□ -0.66
SGMS1-201ENST00000361543 PLEKHG3A1L390 1219 aa10.93□□□□□ -0.66
SGMS1-201ENST00000361543 UNC5CLQ8IV45 518 aa10.93□□□□□ -0.66
SGMS1-201ENST00000361543 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
SGMS1-201ENST00000361543 SBNO2Q9Y2G9 1366 aa10.92□□□□□ -0.66
SGMS1-201ENST00000361543 SRCAPQ6ZRS2 3230 aa10.91□□□□□ -0.66
SGMS1-201ENST00000361543 ZBTB22O15209 634 aa10.91□□□□□ -0.66
SGMS1-201ENST00000361543 GJD4Q96KN9 370 aaPredicted RBP10.91□□□□□ -0.66
SGMS1-201ENST00000361543 CARD11Q9BXL7 1154 aa10.91□□□□□ -0.66
SGMS1-201ENST00000361543 USP6P35125 1406 aa10.91□□□□□ -0.66
SGMS1-201ENST00000361543 ATAD2Q6PL18 1390 aa10.9□□□□□ -0.66
SGMS1-201ENST00000361543 LMO7Q8WWI1 1683 aa10.9□□□□□ -0.66
SGMS1-201ENST00000361543 BRD4O60885 1362 aaPredicted RBP10.9□□□□□ -0.67
SGMS1-201ENST00000361543 FAM83GA6ND36 823 aa10.89□□□□□ -0.67
SGMS1-201ENST00000361543 VPS72Q15906 364 aa10.89□□□□□ -0.67
SGMS1-201ENST00000361543 NUTM2GQ5VZR2 741 aa10.89□□□□□ -0.67
SGMS1-201ENST00000361543 KIAA0232Q92628 1395 aa10.89□□□□□ -0.67
SGMS1-201ENST00000361543 SLIT3O75094 1523 aa10.89□□□□□ -0.67
SGMS1-201ENST00000361543 USP54Q70EL1 1684 aa10.89□□□□□ -0.67
SGMS1-201ENST00000361543 ABTB2Q8N961 1025 aa10.88□□□□□ -0.67
SGMS1-201ENST00000361543 PRDM11Q9NQV5 511 aa10.88□□□□□ -0.67
SGMS1-201ENST00000361543 BTG4Q9NY30 223 aa10.88□□□□□ -0.67
SGMS1-201ENST00000361543 CABP1Q9NZU7 370 aa10.88□□□□□ -0.67
SGMS1-201ENST00000361543 THSD7AQ9UPZ6 1657 aa10.88□□□□□ -0.67
SGMS1-201ENST00000361543 USP19O94966 1318 aa10.87□□□□□ -0.67
SGMS1-201ENST00000361543 RNF216Q9NWF9 866 aaPredicted RBP10.87□□□□□ -0.67
SGMS1-201ENST00000361543 CCDC9Q9Y3X0 531 aaKnown RBP10.87□□□□□ -0.67
SGMS1-201ENST00000361543 SSH2Q76I76 1423 aa10.86□□□□□ -0.67
SGMS1-201ENST00000361543 PCGF6Q9BYE7 350 aa10.86□□□□□ -0.67
SGMS1-201ENST00000361543 FOXD4L1Q9NU39 408 aa10.86□□□□□ -0.67
SGMS1-201ENST00000361543 CPSF1Q10570 1443 aaKnown RBP10.85□□□□□ -0.67
SGMS1-201ENST00000361543 ZC3H6P61129 1189 aaKnown RBP10.85□□□□□ -0.67
SGMS1-201ENST00000361543 CHRNA2Q15822 529 aa10.85□□□□□ -0.67
SGMS1-201ENST00000361543 WNK3Q9BYP7 1800 aa10.85□□□□□ -0.67
SGMS1-201ENST00000361543 CPDO75976 1380 aa10.85□□□□□ -0.67
SGMS1-201ENST00000361543 CAMTA1Q9Y6Y1 1673 aa10.85□□□□□ -0.67
SGMS1-201ENST00000361543 LTN1O94822 1766 aa10.85□□□□□ -0.67
SGMS1-201ENST00000361543 COL18A1P39060 1754 aa10.85□□□□□ -0.67
SGMS1-201ENST00000361543 RGPD5Q99666 1765 aa10.85□□□□□ -0.67
SGMS1-201ENST00000361543 NLRP13Q86W25 1043 aa10.84□□□□□ -0.67
SGMS1-201ENST00000361543 KTN1Q86UP2 1357 aaKnown RBP10.84□□□□□ -0.67
SGMS1-201ENST00000361543 CD163L1Q9NR16 1453 aa10.84□□□□□ -0.67
SGMS1-201ENST00000361543 CLSPNQ9HAW4 1339 aa10.84□□□□□ -0.67
SGMS1-201ENST00000361543 SEPT12Q8IYM1 358 aa10.83□□□□□ -0.68
SGMS1-201ENST00000361543 RGPD1P0DJD0 1748 aa10.83□□□□□ -0.68
SGMS1-201ENST00000361543 NFAT5O94916 1531 aa10.83□□□□□ -0.68
SGMS1-201ENST00000361543 SPATA31A5Q5VU36 1347 aa10.83□□□□□ -0.68
SGMS1-201ENST00000361543 SPATA31A7Q8IWB4 1347 aa10.83□□□□□ -0.68
SGMS1-201ENST00000361543 COL5A2P05997 1499 aaPredicted RBP10.82□□□□□ -0.68
SGMS1-201ENST00000361543 PARP4Q9UKK3 1724 aaKnown RBP10.82□□□□□ -0.68
SGMS1-201ENST00000361543 A0A0G2JS52 829 aa10.82□□□□□ -0.68
SGMS1-201ENST00000361543 ONECUT3O60422 494 aaPredicted RBP10.82□□□□□ -0.68
SGMS1-201ENST00000361543 GCP02774 474 aa10.82□□□□□ -0.68
SGMS1-201ENST00000361543 NLRP6P59044 892 aa10.82□□□□□ -0.68
SGMS1-201ENST00000361543 MYT1Q01538 1121 aa10.82□□□□□ -0.68
SGMS1-201ENST00000361543 FAM98CQ17RN3 349 aaKnown RBP10.82□□□□□ -0.68
SGMS1-201ENST00000361543 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
SGMS1-201ENST00000361543 TTC21BQ7Z4L5 1316 aa10.82□□□□□ -0.68
SGMS1-201ENST00000361543 TTC21AQ8NDW8 1320 aa10.82□□□□□ -0.68
SGMS1-201ENST00000361543 TNS1Q9HBL0 1735 aaKnown RBP10.81□□□□□ -0.68
SGMS1-201ENST00000361543 USP47Q96K76 1375 aa10.81□□□□□ -0.68
SGMS1-201ENST00000361543 ABCC6O95255 1503 aa10.81□□□□□ -0.68
SGMS1-201ENST00000361543 STRN4Q9NRL3 753 aa10.81□□□□□ -0.68
SGMS1-201ENST00000361543 MYOM1P52179 1685 aa10.81□□□□□ -0.68
SGMS1-201ENST00000361543 SPATA31A1Q5TZJ5 1347 aa10.81□□□□□ -0.68
SGMS1-201ENST00000361543 ST20-MTHFSA0A0A6YYL1 179 aa10.8□□□□□ -0.68
SGMS1-201ENST00000361543 KRT27Q7Z3Y8 459 aa10.8□□□□□ -0.68
SGMS1-201ENST00000361543 TMC1Q8TDI8 760 aa10.8□□□□□ -0.68
SGMS1-201ENST00000361543 TESK2Q96S53 571 aa10.8□□□□□ -0.68
SGMS1-201ENST00000361543 BLMP54132 1417 aaPredicted RBP10.8□□□□□ -0.68
SGMS1-201ENST00000361543 EDC4Q6P2E9 1401 aaKnown RBP10.8□□□□□ -0.68
SGMS1-201ENST00000361543 KIF20BQ96Q89 1820 aa10.79□□□□□ -0.68
SGMS1-201ENST00000361543 A0A1W2PP64 1363 aa10.79□□□□□ -0.68
SGMS1-201ENST00000361543 AATKQ6ZMQ8 1374 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms