RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 TSHZ2Q9NRE2 1034 aa17.08■□□□□ 0.32
CTR9-201ENST00000361367 CADPS2Q86UW7 1296 aa17.08■□□□□ 0.32
CTR9-201ENST00000361367 DISP3Q9P2K9 1392 aa17.07■□□□□ 0.32
CTR9-201ENST00000361367 GBP4Q96PP9 640 aa17.07■□□□□ 0.32
CTR9-201ENST00000361367 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
CTR9-201ENST00000361367 SAMD9Q5K651 1589 aa17.06■□□□□ 0.32
CTR9-201ENST00000361367 BCAR3O75815 825 aa17.06■□□□□ 0.32
CTR9-201ENST00000361367 RUFY2Q8WXA3 655 aa17.06■□□□□ 0.32
CTR9-201ENST00000361367 VPS37DQ86XT2 251 aa17.06■□□□□ 0.32
CTR9-201ENST00000361367 ZMYM3Q14202 1370 aa17.06■□□□□ 0.32
CTR9-201ENST00000361367 CT47B1P0C2W7 299 aaPredicted RBP17.05■□□□□ 0.32
CTR9-201ENST00000361367 ACEP12821 1306 aa17.05■□□□□ 0.32
CTR9-201ENST00000361367 PDE3AQ14432 1141 aa17.05■□□□□ 0.32
CTR9-201ENST00000361367 KRT28Q7Z3Y7 464 aa17.05■□□□□ 0.32
CTR9-201ENST00000361367 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
CTR9-201ENST00000361367 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
CTR9-201ENST00000361367 MAPKBP1O60336 1514 aa17.04■□□□□ 0.32
CTR9-201ENST00000361367 REC8O95072 547 aa17.04■□□□□ 0.32
CTR9-201ENST00000361367 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
CTR9-201ENST00000361367 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
CTR9-201ENST00000361367 KIF6Q6ZMV9 814 aa17.03■□□□□ 0.32
CTR9-201ENST00000361367 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
CTR9-201ENST00000361367 FAM177BA6PVY3 158 aa17.03■□□□□ 0.32
CTR9-201ENST00000361367 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
CTR9-201ENST00000361367 NINLQ9Y2I6 1382 aa17.03■□□□□ 0.32
CTR9-201ENST00000361367 NEUROD6Q96NK8 337 aa17.03■□□□□ 0.32
CTR9-201ENST00000361367 PRAG1Q86YV5 1406 aa17.03■□□□□ 0.32
CTR9-201ENST00000361367 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
CTR9-201ENST00000361367 BTBD11A6QL63 1104 aa17.02■□□□□ 0.32
CTR9-201ENST00000361367 SURF6O75683 361 aaKnown RBP17.02■□□□□ 0.31
CTR9-201ENST00000361367 HTATSF1O43719 755 aaKnown RBP17.01■□□□□ 0.31
CTR9-201ENST00000361367 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
CTR9-201ENST00000361367 ERC2O15083 957 aa17.01■□□□□ 0.31
CTR9-201ENST00000361367 LRPPRCP42704 1394 aaKnown RBP17.01■□□□□ 0.31
CTR9-201ENST00000361367 RALGAPBQ86X10 1494 aa17.01■□□□□ 0.31
CTR9-201ENST00000361367 NSD2O96028 1365 aa17■□□□□ 0.31
CTR9-201ENST00000361367 ADAMTS2O95450 1211 aa17■□□□□ 0.31
CTR9-201ENST00000361367 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
CTR9-201ENST00000361367 MCM10Q7L590 875 aa17■□□□□ 0.31
CTR9-201ENST00000361367 DNMT1P26358 1616 aaKnown RBP17■□□□□ 0.31
CTR9-201ENST00000361367 ZKSCAN1P17029 563 aaPredicted RBP16.99■□□□□ 0.31
CTR9-201ENST00000361367 CLASRPQ8N2M8 674 aaKnown RBP16.99■□□□□ 0.31
CTR9-201ENST00000361367 NOL10Q9BSC4 688 aaKnown RBP16.99■□□□□ 0.31
CTR9-201ENST00000361367 ATP10AO60312 1499 aa16.99■□□□□ 0.31
CTR9-201ENST00000361367 KIF3AQ9Y496 699 aa16.99■□□□□ 0.31
CTR9-201ENST00000361367 MYL6BP14649 208 aa16.99■□□□□ 0.31
CTR9-201ENST00000361367 DCTN1Q14203 1278 aa16.99■□□□□ 0.31
CTR9-201ENST00000361367 SRCIN1Q9C0H9 1055 aa16.99■□□□□ 0.31
CTR9-201ENST00000361367 ANO2Q9NQ90 1003 aa16.99■□□□□ 0.31
CTR9-201ENST00000361367 ATP7AQ04656 1500 aa16.99■□□□□ 0.31
CTR9-201ENST00000361367 GNAI2P04899 355 aa16.98■□□□□ 0.31
CTR9-201ENST00000361367 APPP05067 770 aa16.98■□□□□ 0.31
CTR9-201ENST00000361367 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
CTR9-201ENST00000361367 C1orf115Q9H7X2 142 aa16.98■□□□□ 0.31
CTR9-201ENST00000361367 CCT4P50991 539 aaKnown RBP16.98■□□□□ 0.31
CTR9-201ENST00000361367 HSPA2P54652 639 aa16.98■□□□□ 0.31
CTR9-201ENST00000361367 SLFN5Q08AF3 891 aa16.98■□□□□ 0.31
CTR9-201ENST00000361367 MSH6P52701 1360 aa16.97■□□□□ 0.31
CTR9-201ENST00000361367 AMOTQ4VCS5 1084 aa16.97■□□□□ 0.31
CTR9-201ENST00000361367 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
CTR9-201ENST00000361367 ADGRL2O95490 1459 aa16.96■□□□□ 0.31
CTR9-201ENST00000361367 INTS3Q68E01 1043 aaKnown RBP16.95■□□□□ 0.3
CTR9-201ENST00000361367 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
CTR9-201ENST00000361367 PTMSP20962 102 aa16.95■□□□□ 0.3
CTR9-201ENST00000361367 GOLGA6L6A8MZA4 724 aa16.95■□□□□ 0.3
CTR9-201ENST00000361367 TTC21BQ7Z4L5 1316 aa16.95■□□□□ 0.3
CTR9-201ENST00000361367 PZPP20742 1482 aa16.94■□□□□ 0.3
CTR9-201ENST00000361367 NEO1Q92859 1461 aa16.94■□□□□ 0.3
CTR9-201ENST00000361367 FYB1O15117 783 aa16.94■□□□□ 0.3
CTR9-201ENST00000361367 ANKRD36BQ8N2N9 1353 aa16.94■□□□□ 0.3
CTR9-201ENST00000361367 AMOTL1Q8IY63 956 aa16.94■□□□□ 0.3
CTR9-201ENST00000361367 FBXW7Q969H0 707 aa16.94■□□□□ 0.3
CTR9-201ENST00000361367 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
CTR9-201ENST00000361367 ABCC11Q96J66 1382 aa16.93■□□□□ 0.3
CTR9-201ENST00000361367 DUSP27Q5VZP5 1158 aa16.93■□□□□ 0.3
CTR9-201ENST00000361367 FBLN1P23142 703 aa16.93■□□□□ 0.3
CTR9-201ENST00000361367 RNF20Q5VTR2 975 aa16.93■□□□□ 0.3
CTR9-201ENST00000361367 NRDCO43847 1150 aa16.93■□□□□ 0.3
CTR9-201ENST00000361367 DNTTIP2Q5QJE6 756 aaKnown RBP16.93■□□□□ 0.3
CTR9-201ENST00000361367 TAF7Q15545 349 aaPredicted RBP16.92■□□□□ 0.3
CTR9-201ENST00000361367 NGLY1Q96IV0 654 aa16.92■□□□□ 0.3
CTR9-201ENST00000361367 MAGI3Q5TCQ9 1506 aa16.92■□□□□ 0.3
CTR9-201ENST00000361367 MVPQ14764 893 aaKnown RBP16.92■□□□□ 0.3
CTR9-201ENST00000361367 CHMP4CQ96CF2 233 aa16.92■□□□□ 0.3
CTR9-201ENST00000361367 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
CTR9-201ENST00000361367 IFT57Q9NWB7 429 aa16.92■□□□□ 0.3
CTR9-201ENST00000361367 TBX22Q9Y458 520 aa16.92■□□□□ 0.3
CTR9-201ENST00000361367 TTC21AQ8NDW8 1320 aa16.92■□□□□ 0.3
CTR9-201ENST00000361367 KCNA6P17658 529 aa16.92■□□□□ 0.3
CTR9-201ENST00000361367 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
CTR9-201ENST00000361367 NPHP3Q7Z494 1330 aa16.92■□□□□ 0.3
CTR9-201ENST00000361367 MPRIPQ6WCQ1 1025 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 SYNE3Q6ZMZ3 975 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 TESK2Q96S53 571 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 PPIP5K1Q6PFW1 1433 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 NCKAP5LQ9HCH0 1330 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 TRDNQ13061 729 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 CHRNA2Q15822 529 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
CTR9-201ENST00000361367 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms