RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 COG3Q96JB2 828 aa19.24■□□□□ 0.67
CLSTN1-201ENST00000361311 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
CLSTN1-201ENST00000361311 OFD1O75665 1012 aa19.24■□□□□ 0.67
CLSTN1-201ENST00000361311 CCDC112Q8NEF3 446 aa19.24■□□□□ 0.67
CLSTN1-201ENST00000361311 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
CLSTN1-201ENST00000361311 TRIM27P14373 513 aa19.23■□□□□ 0.67
CLSTN1-201ENST00000361311 FKBP5Q13451 457 aaPredicted RBP19.23■□□□□ 0.67
CLSTN1-201ENST00000361311 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
CLSTN1-201ENST00000361311 RALGAPBQ86X10 1494 aa19.23■□□□□ 0.67
CLSTN1-201ENST00000361311 CCDC192P0DO97 292 aa19.22■□□□□ 0.67
CLSTN1-201ENST00000361311 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
CLSTN1-201ENST00000361311 GPRASP1Q5JY77 1395 aa19.22■□□□□ 0.67
CLSTN1-201ENST00000361311 BMP2KLQ5H9B9 411 aa19.22■□□□□ 0.67
CLSTN1-201ENST00000361311 MNS1Q8NEH6 495 aa19.22■□□□□ 0.67
CLSTN1-201ENST00000361311 TMPOP42166 694 aaKnown RBP19.21■□□□□ 0.67
CLSTN1-201ENST00000361311 ZSCAN23Q3MJ62 389 aa19.21■□□□□ 0.67
CLSTN1-201ENST00000361311 NPHP1O15259 732 aa19.2■□□□□ 0.66
CLSTN1-201ENST00000361311 FAM69CQ0P6D2 419 aa19.2■□□□□ 0.66
CLSTN1-201ENST00000361311 TBC1D9Q6ZT07 1266 aa19.2■□□□□ 0.66
CLSTN1-201ENST00000361311 RBM27Q9P2N5 1060 aaKnown RBP19.2■□□□□ 0.66
CLSTN1-201ENST00000361311 GRIN2BQ13224 1484 aa19.19■□□□□ 0.66
CLSTN1-201ENST00000361311 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
CLSTN1-201ENST00000361311 NECTIN2Q92692 538 aa19.19■□□□□ 0.66
CLSTN1-201ENST00000361311 ABCA10Q8WWZ4 1543 aa19.19■□□□□ 0.66
CLSTN1-201ENST00000361311 SNX21Q969T3 373 aa19.19■□□□□ 0.66
CLSTN1-201ENST00000361311 FBXW7Q969H0 707 aa19.19■□□□□ 0.66
CLSTN1-201ENST00000361311 CCDC73Q6ZRK6 1079 aa19.18■□□□□ 0.66
CLSTN1-201ENST00000361311 ZNF428Q96B54 188 aa19.18■□□□□ 0.66
CLSTN1-201ENST00000361311 USP25Q9UHP3 1055 aa19.18■□□□□ 0.66
CLSTN1-201ENST00000361311 CAMSAP2Q08AD1 1489 aa19.18■□□□□ 0.66
CLSTN1-201ENST00000361311 PER1O15534 1290 aaPredicted RBP19.18■□□□□ 0.66
CLSTN1-201ENST00000361311 ZKSCAN5Q9Y2L8 839 aa19.18■□□□□ 0.66
CLSTN1-201ENST00000361311 RNF20Q5VTR2 975 aa19.17■□□□□ 0.66
CLSTN1-201ENST00000361311 RAB3GAP1Q15042 981 aa19.17■□□□□ 0.66
CLSTN1-201ENST00000361311 NSD3Q9BZ95 1437 aa19.17■□□□□ 0.66
CLSTN1-201ENST00000361311 HDAC1Q13547 482 aaPredicted RBP19.17■□□□□ 0.66
CLSTN1-201ENST00000361311 SMC5Q8IY18 1101 aa19.16■□□□□ 0.66
CLSTN1-201ENST00000361311 AMPHP49418 695 aa19.16■□□□□ 0.66
CLSTN1-201ENST00000361311 PPP4R3BQ5MIZ7 849 aa19.16■□□□□ 0.66
CLSTN1-201ENST00000361311 TAF3Q5VWG9 929 aa19.15■□□□□ 0.66
CLSTN1-201ENST00000361311 IFIT2P09913 472 aaKnown RBP19.15■□□□□ 0.66
CLSTN1-201ENST00000361311 TNNQ9UQP3 1299 aa19.15■□□□□ 0.66
CLSTN1-201ENST00000361311 RLBP1P12271 317 aa19.15■□□□□ 0.66
CLSTN1-201ENST00000361311 CCDC34Q96HJ3 373 aa19.15■□□□□ 0.66
CLSTN1-201ENST00000361311 UGGT2Q9NYU1 1516 aa19.15■□□□□ 0.66
CLSTN1-201ENST00000361311 HS1BP3Q53T59 392 aa19.14■□□□□ 0.66
CLSTN1-201ENST00000361311 PRIMPOLQ96LW4 560 aa19.14■□□□□ 0.65
CLSTN1-201ENST00000361311 PDCP20941 246 aa19.14■□□□□ 0.65
CLSTN1-201ENST00000361311 LRSAM1Q6UWE0 723 aa19.13■□□□□ 0.65
CLSTN1-201ENST00000361311 TSPYL4Q9UJ04 414 aa19.13■□□□□ 0.65
CLSTN1-201ENST00000361311 SPINK5Q9NQ38 1064 aaPredicted RBP19.13■□□□□ 0.65
CLSTN1-201ENST00000361311 GNAI3P08754 354 aa19.13■□□□□ 0.65
CLSTN1-201ENST00000361311 RBM42Q9BTD8 480 aaKnown RBP19.13■□□□□ 0.65
CLSTN1-201ENST00000361311 CFAP43Q8NDM7 1665 aa19.13■□□□□ 0.65
CLSTN1-201ENST00000361311 TNMDQ9H2S6 317 aa19.12■□□□□ 0.65
CLSTN1-201ENST00000361311 RPAP2Q8IXW5 612 aaPredicted RBP19.12■□□□□ 0.65
CLSTN1-201ENST00000361311 UPF3BQ9BZI7 483 aaKnown RBP19.12■□□□□ 0.65
CLSTN1-201ENST00000361311 NUTM2FA1L443 756 aa19.12■□□□□ 0.65
CLSTN1-201ENST00000361311 PRIM1P49642 420 aaKnown RBP19.12■□□□□ 0.65
CLSTN1-201ENST00000361311 ALDH1L2Q3SY69 923 aa19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 CCDC183Q5T5S1 534 aa19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 CNTROBQ8N137 903 aa19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 SDF4Q9BRK5 362 aa19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 SPDYE4A6NLX3 237 aa19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 KRT85P78386 507 aa19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 NUCB1Q02818 461 aa19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 AFAP1Q8N556 730 aa19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 GDPD2Q9HCC8 539 aa19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 CGNQ9P2M7 1197 aaKnown RBP19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 IFT140Q96RY7 1462 aa19.11■□□□□ 0.65
CLSTN1-201ENST00000361311 SURF6O75683 361 aaKnown RBP19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 GAS2L2Q8NHY3 880 aa19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 CHMP4CQ96CF2 233 aa19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 UBTFL1P0CB47 393 aaPredicted RBP19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 GORABQ5T7V8 394 aa19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 HSP90AB4PQ58FF6 505 aa19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 LTV1Q96GA3 475 aaPredicted RBP19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 NAT10Q9H0A0 1025 aaKnown RBP19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 GNAI2P04899 355 aa19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 EIF2S2P20042 333 aaKnown RBP19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 FOSBP53539 338 aa19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 ARHGAP5Q13017 1502 aa19.1■□□□□ 0.65
CLSTN1-201ENST00000361311 CUL7Q14999 1698 aa19.09■□□□□ 0.65
CLSTN1-201ENST00000361311 ERICH4A6NGS2 130 aa19.09■□□□□ 0.65
CLSTN1-201ENST00000361311 C9orf78Q9NZ63 289 aaPredicted RBP19.09■□□□□ 0.65
CLSTN1-201ENST00000361311 ADCY5O95622 1261 aa19.09■□□□□ 0.65
CLSTN1-201ENST00000361311 CREBRFQ8IUR6 639 aa19.09■□□□□ 0.65
CLSTN1-201ENST00000361311 TESK2Q96S53 571 aa19.09■□□□□ 0.65
CLSTN1-201ENST00000361311 LRRCC1Q9C099 1032 aa19.09■□□□□ 0.65
CLSTN1-201ENST00000361311 AEBP1Q8IUX7 1158 aa19.08■□□□□ 0.65
CLSTN1-201ENST00000361311 NUP62CLQ9H1M0 184 aa19.08■□□□□ 0.65
CLSTN1-201ENST00000361311 CWC15Q9P013 229 aaKnown RBP19.08■□□□□ 0.65
CLSTN1-201ENST00000361311 TEX14Q8IWB6 1497 aa19.08■□□□□ 0.64
CLSTN1-201ENST00000361311 SPATA31E1Q6ZUB1 1445 aa19.08■□□□□ 0.64
CLSTN1-201ENST00000361311 KINO60870 393 aaKnown RBP19.07■□□□□ 0.64
CLSTN1-201ENST00000361311 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
CLSTN1-201ENST00000361311 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
CLSTN1-201ENST00000361311 NOM1Q5C9Z4 860 aaKnown RBP19.07■□□□□ 0.64
CLSTN1-201ENST00000361311 ZNF830Q96NB3 372 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms