RNA–Protein interactions for RNA: ENST00000361204.8

SREBF2-201, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREBF2, Length 5,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-201ENST00000361204 CEP89Q96ST8 783 aa21.44■■□□□ 1.02
SREBF2-201ENST00000361204 PCMTD1Q96MG8 357 aaPredicted RBP21.44■■□□□ 1.02
SREBF2-201ENST00000361204 PDE4CQ08493 712 aa21.43■■□□□ 1.02
SREBF2-201ENST00000361204 SLC12A5Q9H2X9 1139 aa21.43■■□□□ 1.02
SREBF2-201ENST00000361204 MARCH6O60337 910 aa21.42■■□□□ 1.02
SREBF2-201ENST00000361204 OLFM4Q6UX06 510 aa21.42■■□□□ 1.02
SREBF2-201ENST00000361204 APPP05067 770 aa21.42■■□□□ 1.02
SREBF2-201ENST00000361204 PDCL3Q9H2J4 239 aa21.42■■□□□ 1.02
SREBF2-201ENST00000361204 SMC2O95347 1197 aa21.41■■□□□ 1.02
SREBF2-201ENST00000361204 PDILTQ8N807 584 aa21.41■■□□□ 1.02
SREBF2-201ENST00000361204 NCOA1Q15788 1441 aa21.41■■□□□ 1.02
SREBF2-201ENST00000361204 UBE2Q2Q8WVN8 375 aa21.41■■□□□ 1.02
SREBF2-201ENST00000361204 AK7Q96M32 723 aa21.41■■□□□ 1.02
SREBF2-201ENST00000361204 RUFY1Q96T51 708 aa21.41■■□□□ 1.02
SREBF2-201ENST00000361204 SYCE3A1L190 88 aa21.41■■□□□ 1.02
SREBF2-201ENST00000361204 CCP110O43303 1012 aa21.41■■□□□ 1.02
SREBF2-201ENST00000361204 TRHP20396 242 aaPredicted RBP21.41■■□□□ 1.02
SREBF2-201ENST00000361204 GNAI2P04899 355 aa21.4■■□□□ 1.02
SREBF2-201ENST00000361204 FMNL2Q96PY5 1086 aa21.4■■□□□ 1.02
SREBF2-201ENST00000361204 FSD1Q9BTV5 496 aa21.4■■□□□ 1.02
SREBF2-201ENST00000361204 AEBP1Q8IUX7 1158 aa21.39■■□□□ 1.02
SREBF2-201ENST00000361204 PLEKHH2Q8IVE3 1493 aa21.39■■□□□ 1.02
SREBF2-201ENST00000361204 SAFBQ15424 915 aaKnown RBP eCLIP21.39■■□□□ 1.01
SREBF2-201ENST00000361204 TNMDQ9H2S6 317 aa21.39■■□□□ 1.01
SREBF2-201ENST00000361204 CCDC47Q96A33 483 aaKnown RBP21.39■■□□□ 1.01
SREBF2-201ENST00000361204 KRT85P78386 507 aa21.38■■□□□ 1.01
SREBF2-201ENST00000361204 RALYLQ86SE5 291 aaKnown RBP21.38■■□□□ 1.01
SREBF2-201ENST00000361204 PDCL2Q8N4E4 241 aa21.38■■□□□ 1.01
SREBF2-201ENST00000361204 NFXL1Q6ZNB6 911 aa21.38■■□□□ 1.01
SREBF2-201ENST00000361204 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
SREBF2-201ENST00000361204 ERCC4Q92889 916 aaPredicted RBP21.37■■□□□ 1.01
SREBF2-201ENST00000361204 CCDC30Q5VVM6 783 aa21.37■■□□□ 1.01
SREBF2-201ENST00000361204 TMEM57Q8N5G2 664 aa21.36■■□□□ 1.01
SREBF2-201ENST00000361204 TNPO1Q92973 898 aaKnown RBP21.36■■□□□ 1.01
SREBF2-201ENST00000361204 TTC5Q8N0Z6 440 aa21.36■■□□□ 1.01
SREBF2-201ENST00000361204 CYP46A1Q9Y6A2 500 aa21.36■■□□□ 1.01
SREBF2-201ENST00000361204 RARSP54136 660 aaKnown RBP21.36■■□□□ 1.01
SREBF2-201ENST00000361204 ZNF428Q96B54 188 aa21.36■■□□□ 1.01
SREBF2-201ENST00000361204 DAPK1P53355 1430 aa21.36■■□□□ 1.01
SREBF2-201ENST00000361204 C9orf84Q5VXU9 1444 aa21.36■■□□□ 1.01
SREBF2-201ENST00000361204 LRRCC1Q9C099 1032 aa21.35■■□□□ 1.01
SREBF2-201ENST00000361204 ANKRD30BQ9BXX2 1392 aa21.35■■□□□ 1.01
SREBF2-201ENST00000361204 PODXL2Q9NZ53 605 aa21.35■■□□□ 1.01
SREBF2-201ENST00000361204 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
SREBF2-201ENST00000361204 HIP1O00291 1037 aa21.35■■□□□ 1.01
SREBF2-201ENST00000361204 LRPPRCP42704 1394 aaKnown RBP21.34■■□□□ 1.01
SREBF2-201ENST00000361204 NKTRP30414 1462 aaKnown RBP21.34■■□□□ 1.01
SREBF2-201ENST00000361204 XPCQ01831 940 aaPredicted RBP21.34■■□□□ 1.01
SREBF2-201ENST00000361204 DHX8Q14562 1220 aaKnown RBP21.34■■□□□ 1.01
SREBF2-201ENST00000361204 SLC4A2P04920 1241 aa21.33■■□□□ 1.01
SREBF2-201ENST00000361204 ZNF396Q96N95 335 aaPredicted RBP21.33■■□□□ 1.01
SREBF2-201ENST00000361204 DUSP27Q5VZP5 1158 aa21.33■■□□□ 1.01
SREBF2-201ENST00000361204 LEKR1Q6ZMV7 388 aa21.33■■□□□ 1.01
SREBF2-201ENST00000361204 CEBPZQ03701 1054 aaKnown RBP21.32■■□□□ 1
SREBF2-201ENST00000361204 LARP1BQ659C4 914 aaKnown RBP21.32■■□□□ 1
SREBF2-201ENST00000361204 CCT4P50991 539 aaKnown RBP21.32■■□□□ 1
SREBF2-201ENST00000361204 NEUROD6Q96NK8 337 aa21.32■■□□□ 1
SREBF2-201ENST00000361204 SSFA2P28290 1259 aa21.32■■□□□ 1
SREBF2-201ENST00000361204 PATL2C9JE40 543 aaKnown RBP21.31■■□□□ 1
SREBF2-201ENST00000361204 CLCN1P35523 988 aa21.31■■□□□ 1
SREBF2-201ENST00000361204 RPAP2Q8IXW5 612 aaPredicted RBP21.31■■□□□ 1
SREBF2-201ENST00000361204 NUP62CLQ9H1M0 184 aa21.31■■□□□ 1
SREBF2-201ENST00000361204 H0YHG0 523 aa21.3■■□□□ 1
SREBF2-201ENST00000361204 CDR1P51861 262 aa21.3■■□□□ 1
SREBF2-201ENST00000361204 STK38Q15208 465 aa21.3■■□□□ 1
SREBF2-201ENST00000361204 TBC1D32Q96NH3 1257 aa21.3■■□□□ 1
SREBF2-201ENST00000361204 ANKRD1Q15327 319 aa21.3■■□□□ 1
SREBF2-201ENST00000361204 SRCIN1Q9C0H9 1055 aa21.3■■□□□ 1
SREBF2-201ENST00000361204 NCAPD3P42695 1498 aa21.3■■□□□ 1
SREBF2-201ENST00000361204 ERICH2A1L162 156 aa21.29■■□□□ 1
SREBF2-201ENST00000361204 WASHC4Q2M389 1173 aa21.29■■□□□ 1
SREBF2-201ENST00000361204 RIC3Q7Z5B4 369 aa21.29■■□□□ 1
SREBF2-201ENST00000361204 TTLL5Q6EMB2 1281 aa21.28■■□□□ 1
SREBF2-201ENST00000361204 PRDM10Q9NQV6 1147 aa21.28■■□□□ 1
SREBF2-201ENST00000361204 GAS2L2Q8NHY3 880 aa21.28■■□□□ 1
SREBF2-201ENST00000361204 SUPT6HQ7KZ85 1726 aaKnown RBP21.28■■□□□ 1
SREBF2-201ENST00000361204 AIMP1Q12904 312 aaKnown RBP21.27■■□□□ 1
SREBF2-201ENST00000361204 TMPOP42166 694 aaKnown RBP21.27■■□□□ 1
SREBF2-201ENST00000361204 CAGE1Q8TC20 777 aa21.27■■□□□ 1
SREBF2-201ENST00000361204 GTF2E1P29083 439 aaPredicted RBP21.27■■□□□ 1
SREBF2-201ENST00000361204 CBX1P83916 185 aa21.27■■□□□ 1
SREBF2-201ENST00000361204 TAF3Q5VWG9 929 aa21.27■□□□□ 0.99
SREBF2-201ENST00000361204 ERC1Q8IUD2 1116 aa21.27■□□□□ 0.99
SREBF2-201ENST00000361204 SPATA32Q96LK8 384 aa21.27■□□□□ 0.99
SREBF2-201ENST00000361204 NAP1L1P55209 391 aaKnown RBP21.26■□□□□ 0.99
SREBF2-201ENST00000361204 FILIP1Q7Z7B0 1213 aa21.26■□□□□ 0.99
SREBF2-201ENST00000361204 ZMYND15Q9H091 742 aa21.26■□□□□ 0.99
SREBF2-201ENST00000361204 VPS53Q5VIR6 699 aa21.26■□□□□ 0.99
SREBF2-201ENST00000361204 SSH1Q8WYL5 1049 aa21.26■□□□□ 0.99
SREBF2-201ENST00000361204 ZSCAN31Q96LW9 406 aaPredicted RBP21.26■□□□□ 0.99
SREBF2-201ENST00000361204 SERPINC1P01008 464 aa21.26■□□□□ 0.99
SREBF2-201ENST00000361204 XRCC6P12956 609 aaKnown RBP eCLIP21.26■□□□□ 0.993e-7■■■■■ 27
SREBF2-201ENST00000361204 ME1P48163 572 aa21.25■□□□□ 0.99
SREBF2-201ENST00000361204 MCM5P33992 734 aa21.25■□□□□ 0.99
SREBF2-201ENST00000361204 AFAP1Q8N556 730 aa21.25■□□□□ 0.99
SREBF2-201ENST00000361204 STK3Q13188 491 aa21.25■□□□□ 0.99
SREBF2-201ENST00000361204 MAP3K11Q16584 847 aa21.25■□□□□ 0.99
SREBF2-201ENST00000361204 DHX16O60231 1041 aaKnown RBP21.24■□□□□ 0.99
SREBF2-201ENST00000361204 IGHDP01880 384 aa21.24■□□□□ 0.99
SREBF2-201ENST00000361204 FILIP1LQ4L180 1135 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms