RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TSHZ2Q9NRE2 1034 aa5.9□□□□□ -1.46
SCN3A-202ENST00000360093 KIAA0556O60303 1618 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 TSR1Q2NL82 804 aaKnown RBP5.9□□□□□ -1.47
SCN3A-202ENST00000360093 PLCH2O75038 1416 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 ZNF518AQ6AHZ1 1483 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 GOLGA6L19H0YKK7 550 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 NUDT16Q96DE0 195 aaKnown RBP5.9□□□□□ -1.47
SCN3A-202ENST00000360093 ANO2Q9NQ90 1003 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 CDC45O75419 566 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 TBC1D2BQ9UPU7 963 aa5.9□□□□□ -1.47
SCN3A-202ENST00000360093 SCAF11Q99590 1463 aaKnown RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 NUTM2GQ5VZR2 741 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 CTDP1Q9Y5B0 961 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 DEKP35659 375 aaKnown RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 SULT6B1Q6IMI4 303 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 RALYLQ86SE5 291 aaKnown RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 EIF2AK4Q9P2K8 1649 aaKnown RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 TPM1P09493 284 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 CABP4P57796 275 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 NSD3Q9BZ95 1437 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 DMRT2Q9Y5R5 561 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 TPM3P06753 285 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 SAFBQ15424 915 aaKnown RBP eCLIP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 TPD52L1Q16890 204 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 SRCIN1Q9C0H9 1055 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 GZF1Q9H116 711 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 XBP1P17861 261 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 AIMP1Q12904 312 aaKnown RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 TOM1L2Q6ZVM7 507 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 CHMP5Q9NZZ3 219 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 KDM5BQ9UGL1 1544 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.89□□□□□ -1.47
SCN3A-202ENST00000360093 FANCIQ9NVI1 1328 aa5.89□□□□□ -1.47
SCN3A-202ENST00000360093 ABCC11Q96J66 1382 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 NOL8Q76FK4 1167 aaKnown RBP5.88□□□□□ -1.47
SCN3A-202ENST00000360093 HDGFL1Q5TGJ6 251 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 GNL3LQ9NVN8 582 aaKnown RBP5.88□□□□□ -1.47
SCN3A-202ENST00000360093 TCEAL9Q9UHQ7 104 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 SLC3A2P08195 630 aaKnown RBP5.88□□□□□ -1.47
SCN3A-202ENST00000360093 VPS53Q5VIR6 699 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 WDR7Q9Y4E6 1490 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 AMOTQ4VCS5 1084 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 ANKRD20A12PQ8NF67 263 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 SLC26A8Q96RN1 970 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 DDX49Q9Y6V7 483 aaKnown RBP5.88□□□□□ -1.47
SCN3A-202ENST00000360093 SART3Q15020 963 aaKnown RBP5.88□□□□□ -1.47
SCN3A-202ENST00000360093 DNAJC5BQ9UF47 199 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 ATP10BO94823 1461 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 BRMS1Q9HCU9 246 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 NFXL1Q6ZNB6 911 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 CEP89Q96ST8 783 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 SMC3Q9UQE7 1217 aa5.88□□□□□ -1.47
SCN3A-202ENST00000360093 NUP160Q12769 1436 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 NEUROD6Q96NK8 337 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 BECN2A8MW95 431 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 EXOSC9Q06265 439 aaKnown RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 NFE2L2Q16236 605 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 ZNF530Q6P9A1 599 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 LNPKQ9C0E8 428 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 PRDM11Q9NQV5 511 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 WDR62O43379 1518 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 EIF4G3O43432 1585 aaKnown RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 GNAT3A8MTJ3 354 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 C22orf23Q9BZE7 217 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 PDIA4P13667 645 aaKnown RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 CCDC158Q5M9N0 1113 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 MCTP1Q6DN14 999 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 SURF6O75683 361 aaKnown RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 ZSCAN25Q6NSZ9 544 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 ATF7IPQ6VMQ6 1270 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 PANK1Q8TE04 598 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 DHX16O60231 1041 aaKnown RBP5.87□□□□□ -1.47
SCN3A-202ENST00000360093 SLC4A2P04920 1241 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 ASXL2Q76L83 1435 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 A2MP01023 1474 aa5.87□□□□□ -1.47
SCN3A-202ENST00000360093 PDCP20941 246 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 STRN4Q9NRL3 753 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 NOC3LQ8WTT2 800 aaKnown RBP5.86□□□□□ -1.47
SCN3A-202ENST00000360093 NOB1Q9ULX3 412 aaKnown RBP5.86□□□□□ -1.47
SCN3A-202ENST00000360093 ABCC10Q5T3U5 1492 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 SHANK2Q9UPX8 1470 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 BTBD11A6QL63 1104 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 WASHC4Q2M389 1173 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 SF3B2Q13435 895 aaKnown RBP5.86□□□□□ -1.47
SCN3A-202ENST00000360093 TTC21BQ7Z4L5 1316 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 WASLO00401 505 aaPredicted RBP5.86□□□□□ -1.47
SCN3A-202ENST00000360093 FOXD4L1Q9NU39 408 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 STARD3NLO95772 234 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 ANKRD1Q15327 319 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 C14orf93Q9H972 538 aaKnown RBP5.86□□□□□ -1.47
SCN3A-202ENST00000360093 IFT57Q9NWB7 429 aa5.86□□□□□ -1.47
SCN3A-202ENST00000360093 LRRCC1Q9C099 1032 aa5.85□□□□□ -1.47
SCN3A-202ENST00000360093 RBM42Q9BTD8 480 aaKnown RBP5.85□□□□□ -1.47
SCN3A-202ENST00000360093 ALDH1L2Q3SY69 923 aa5.85□□□□□ -1.47
SCN3A-202ENST00000360093 NUP153P49790 1475 aaKnown RBP5.85□□□□□ -1.47
SCN3A-202ENST00000360093 IDI1Q13907 227 aa5.85□□□□□ -1.47
SCN3A-202ENST00000360093 MVPQ14764 893 aaKnown RBP5.85□□□□□ -1.47
SCN3A-202ENST00000360093 FSD1Q9BTV5 496 aa5.85□□□□□ -1.47
SCN3A-202ENST00000360093 TCOF1Q13428 1488 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms