RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ESCO1Q5FWF5 840 aa18.51■□□□□ 0.55
CSNK1E-201ENST00000359867 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
CSNK1E-201ENST00000359867 ORAI2Q96SN7 254 aa18.51■□□□□ 0.55
CSNK1E-201ENST00000359867 ACEP12821 1306 aa18.51■□□□□ 0.55
CSNK1E-201ENST00000359867 DCCP43146 1447 aa18.5■□□□□ 0.55
CSNK1E-201ENST00000359867 MST1RQ04912 1400 aa18.5■□□□□ 0.55
CSNK1E-201ENST00000359867 CPSF1Q10570 1443 aaKnown RBP18.5■□□□□ 0.55
CSNK1E-201ENST00000359867 PLEKHG3A1L390 1219 aa18.49■□□□□ 0.55
CSNK1E-201ENST00000359867 CADPS2Q86UW7 1296 aa18.49■□□□□ 0.55
CSNK1E-201ENST00000359867 C1orf167Q5SNV9 1468 aa18.49■□□□□ 0.55
CSNK1E-201ENST00000359867 NGDNQ8NEJ9 315 aaKnown RBP18.49■□□□□ 0.55
CSNK1E-201ENST00000359867 PHF8Q9UPP1 1060 aa18.48■□□□□ 0.55
CSNK1E-201ENST00000359867 AKAP12Q02952 1782 aa18.47■□□□□ 0.55
CSNK1E-201ENST00000359867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.47■□□□□ 0.55
CSNK1E-201ENST00000359867 PPP2R1AP30153 589 aa18.46■□□□□ 0.55
CSNK1E-201ENST00000359867 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
CSNK1E-201ENST00000359867 SMG6Q86US8 1419 aaKnown RBP18.44■□□□□ 0.54
CSNK1E-201ENST00000359867 POLR3AO14802 1390 aaPredicted RBP18.44■□□□□ 0.54
CSNK1E-201ENST00000359867 FOXO3O43524 673 aa18.44■□□□□ 0.54
CSNK1E-201ENST00000359867 USP6P35125 1406 aa18.44■□□□□ 0.54
CSNK1E-201ENST00000359867 CGNL1Q0VF96 1302 aa18.43■□□□□ 0.54
CSNK1E-201ENST00000359867 XPCQ01831 940 aaPredicted RBP18.43■□□□□ 0.54
CSNK1E-201ENST00000359867 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
CSNK1E-201ENST00000359867 DDX17Q92841 729 aaKnown RBP18.42■□□□□ 0.54
CSNK1E-201ENST00000359867 ZNF692Q9BU19 519 aaPredicted RBP18.42■□□□□ 0.54
CSNK1E-201ENST00000359867 EDC4Q6P2E9 1401 aaKnown RBP18.42■□□□□ 0.54
CSNK1E-201ENST00000359867 SLAIN2Q9P270 581 aa18.42■□□□□ 0.54
CSNK1E-201ENST00000359867 NRKQ7Z2Y5 1582 aa18.41■□□□□ 0.54
CSNK1E-201ENST00000359867 FYB1O15117 783 aa18.41■□□□□ 0.54
CSNK1E-201ENST00000359867 NME9Q86XW9 330 aa18.41■□□□□ 0.54
CSNK1E-201ENST00000359867 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
CSNK1E-201ENST00000359867 ZRANB1Q9UGI0 708 aa18.4■□□□□ 0.54
CSNK1E-201ENST00000359867 TNNT2P45379 298 aaPredicted RBP18.39■□□□□ 0.54
CSNK1E-201ENST00000359867 NUDCQ9Y266 331 aa18.39■□□□□ 0.54
CSNK1E-201ENST00000359867 SALL2Q9Y467 1007 aaPredicted RBP18.39■□□□□ 0.54
CSNK1E-201ENST00000359867 TTC21BQ7Z4L5 1316 aa18.39■□□□□ 0.53
CSNK1E-201ENST00000359867 PSME1Q06323 249 aa18.39■□□□□ 0.53
CSNK1E-201ENST00000359867 BRINP3Q76B58 766 aa18.39■□□□□ 0.53
CSNK1E-201ENST00000359867 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.53
CSNK1E-201ENST00000359867 PAK3O75914 559 aaPredicted RBP18.38■□□□□ 0.53
CSNK1E-201ENST00000359867 ERICH6BQ5W0A0 696 aa18.38■□□□□ 0.53
CSNK1E-201ENST00000359867 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
CSNK1E-201ENST00000359867 SSH2Q76I76 1423 aa18.38■□□□□ 0.53
CSNK1E-201ENST00000359867 PDE3BQ13370 1112 aa18.36■□□□□ 0.53
CSNK1E-201ENST00000359867 MORC1Q86VD1 984 aa18.36■□□□□ 0.53
CSNK1E-201ENST00000359867 NUTM2GQ5VZR2 741 aa18.35■□□□□ 0.53
CSNK1E-201ENST00000359867 KRT28Q7Z3Y7 464 aa18.34■□□□□ 0.53
CSNK1E-201ENST00000359867 NSD2O96028 1365 aa18.34■□□□□ 0.53
CSNK1E-201ENST00000359867 WDR43Q15061 677 aaKnown RBP eCLIP18.34■□□□□ 0.53
CSNK1E-201ENST00000359867 CCDC136Q96JN2 1154 aa18.34■□□□□ 0.53
CSNK1E-201ENST00000359867 PIK3C2AO00443 1686 aa18.33■□□□□ 0.53
CSNK1E-201ENST00000359867 FBLN1P23142 703 aa18.33■□□□□ 0.53
CSNK1E-201ENST00000359867 ANKRD26Q9UPS8 1709 aa18.33■□□□□ 0.53
CSNK1E-201ENST00000359867 ADAMTS8Q9UP79 889 aa18.33■□□□□ 0.52
CSNK1E-201ENST00000359867 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
CSNK1E-201ENST00000359867 DEKP35659 375 aaKnown RBP18.32■□□□□ 0.52
CSNK1E-201ENST00000359867 TTC21AQ8NDW8 1320 aa18.32■□□□□ 0.52
CSNK1E-201ENST00000359867 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
CSNK1E-201ENST00000359867 ABTB2Q8N961 1025 aa18.32■□□□□ 0.52
CSNK1E-201ENST00000359867 NPHP3Q7Z494 1330 aa18.31■□□□□ 0.52
CSNK1E-201ENST00000359867 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
CSNK1E-201ENST00000359867 SENP3-EIF4A1A0A087X0R7 540 aa18.31■□□□□ 0.52
CSNK1E-201ENST00000359867 COG3Q96JB2 828 aa18.31■□□□□ 0.52
CSNK1E-201ENST00000359867 TRPM3Q9HCF6 1732 aaPredicted RBP18.3■□□□□ 0.52
CSNK1E-201ENST00000359867 SOX12O15370 315 aa18.3■□□□□ 0.52
CSNK1E-201ENST00000359867 ROBO1Q9Y6N7 1651 aa18.3■□□□□ 0.52
CSNK1E-201ENST00000359867 NLRP6P59044 892 aa18.3■□□□□ 0.52
CSNK1E-201ENST00000359867 PIP4K2BP78356 416 aa18.3■□□□□ 0.52
CSNK1E-201ENST00000359867 CERKQ8TCT0 537 aa18.29■□□□□ 0.52
CSNK1E-201ENST00000359867 PPP4R2Q9NY27 417 aa18.29■□□□□ 0.52
CSNK1E-201ENST00000359867 OVOS2A0A0J9YW53 1432 aa18.29■□□□□ 0.52
CSNK1E-201ENST00000359867 OVOS2Q6IE36 1432 aa18.29■□□□□ 0.52
CSNK1E-201ENST00000359867 PXDNQ92626 1479 aa18.28■□□□□ 0.52
CSNK1E-201ENST00000359867 UBAP1LF5GYI3 381 aa18.28■□□□□ 0.52
CSNK1E-201ENST00000359867 RNF123Q5XPI4 1314 aa18.27■□□□□ 0.52
CSNK1E-201ENST00000359867 TOM1O60784 492 aa18.27■□□□□ 0.51
CSNK1E-201ENST00000359867 MARF1Q9Y4F3 1742 aaKnown RBP18.26■□□□□ 0.51
CSNK1E-201ENST00000359867 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
CSNK1E-201ENST00000359867 NHSL1Q5SYE7 1610 aa18.25■□□□□ 0.51
CSNK1E-201ENST00000359867 USP31Q70CQ4 1352 aa18.24■□□□□ 0.51
CSNK1E-201ENST00000359867 MTHFSP49914 203 aa18.24■□□□□ 0.51
CSNK1E-201ENST00000359867 RRS1Q15050 365 aaKnown RBP18.24■□□□□ 0.51
CSNK1E-201ENST00000359867 ALS2Q96Q42 1657 aa18.24■□□□□ 0.51
CSNK1E-201ENST00000359867 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
CSNK1E-201ENST00000359867 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
CSNK1E-201ENST00000359867 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
CSNK1E-201ENST00000359867 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
CSNK1E-201ENST00000359867 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
CSNK1E-201ENST00000359867 NGEFQ8N5V2 710 aa18.22■□□□□ 0.51
CSNK1E-201ENST00000359867 MAP2P11137 1827 aaKnown RBP18.22■□□□□ 0.51
CSNK1E-201ENST00000359867 SPATA31A3Q5VYP0 1347 aa18.22■□□□□ 0.51
CSNK1E-201ENST00000359867 IQSEC2Q5JU85 1478 aa18.22■□□□□ 0.51
CSNK1E-201ENST00000359867 UBE2Q2Q8WVN8 375 aa18.2■□□□□ 0.5
CSNK1E-201ENST00000359867 POLKQ9UBT6 870 aa18.2■□□□□ 0.5
CSNK1E-201ENST00000359867 CABLES1Q8TDN4 633 aa18.2■□□□□ 0.5
CSNK1E-201ENST00000359867 USP54Q70EL1 1684 aa18.2■□□□□ 0.5
CSNK1E-201ENST00000359867 CFAP53Q96M91 514 aa18.19■□□□□ 0.5
CSNK1E-201ENST00000359867 AHDC1Q5TGY3 1603 aaPredicted RBP18.18■□□□□ 0.5
CSNK1E-201ENST00000359867 AATKQ6ZMQ8 1374 aa18.18■□□□□ 0.5
CSNK1E-201ENST00000359867 MED1Q15648 1581 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms