RNA–Protein interactions for RNA: ENST00000359308.8

XRCC6-201, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC6, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-201ENST00000359308 NCKAP5LQ9HCH0 1330 aa17.77■□□□□ 0.43
XRCC6-201ENST00000359308 PPM1GO15355 546 aaPredicted RBP17.77■□□□□ 0.43
XRCC6-201ENST00000359308 MED14O60244 1454 aa17.76■□□□□ 0.43
XRCC6-201ENST00000359308 CCDC27Q2M243 656 aa17.76■□□□□ 0.43
XRCC6-201ENST00000359308 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
XRCC6-201ENST00000359308 TSR2Q969E8 191 aaKnown RBP17.76■□□□□ 0.43
XRCC6-201ENST00000359308 RGS3P49796 1198 aa17.74■□□□□ 0.43
XRCC6-201ENST00000359308 TNRQ92752 1358 aa17.74■□□□□ 0.43
XRCC6-201ENST00000359308 TMPOP42166 694 aaKnown RBP17.73■□□□□ 0.43
XRCC6-201ENST00000359308 MAPK8IP3Q9UPT6 1336 aa17.73■□□□□ 0.43
XRCC6-201ENST00000359308 IGHDP01880 384 aa17.73■□□□□ 0.43
XRCC6-201ENST00000359308 RLBP1P12271 317 aa17.73■□□□□ 0.43
XRCC6-201ENST00000359308 PDE3AQ14432 1141 aa17.73■□□□□ 0.43
XRCC6-201ENST00000359308 PPIP5K1Q6PFW1 1433 aa17.73■□□□□ 0.43
XRCC6-201ENST00000359308 WASLO00401 505 aaPredicted RBP17.72■□□□□ 0.43
XRCC6-201ENST00000359308 DIAPH1O60610 1272 aaKnown RBP17.72■□□□□ 0.43
XRCC6-201ENST00000359308 ZRANB1Q9UGI0 708 aa17.72■□□□□ 0.43
XRCC6-201ENST00000359308 ATP7BP35670 1465 aa17.72■□□□□ 0.43
XRCC6-201ENST00000359308 CLUAP1Q96AJ1 413 aa17.72■□□□□ 0.43
XRCC6-201ENST00000359308 TRIM35Q9UPQ4 493 aa17.72■□□□□ 0.43
XRCC6-201ENST00000359308 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.71■□□□□ 0.43
XRCC6-201ENST00000359308 MYH16Q9H6N6 1097 aa17.71■□□□□ 0.43
XRCC6-201ENST00000359308 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
XRCC6-201ENST00000359308 NME9Q86XW9 330 aa17.71■□□□□ 0.43
XRCC6-201ENST00000359308 MAP2P11137 1827 aaKnown RBP17.7■□□□□ 0.42
XRCC6-201ENST00000359308 POLKQ9UBT6 870 aa17.7■□□□□ 0.42
XRCC6-201ENST00000359308 PNPLA6Q8IY17 1366 aa17.7■□□□□ 0.42
XRCC6-201ENST00000359308 UBR1Q8IWV7 1749 aa17.7■□□□□ 0.42
XRCC6-201ENST00000359308 CEBPAP49715 358 aaPredicted RBP17.69■□□□□ 0.42
XRCC6-201ENST00000359308 ZBTB47Q9UFB7 747 aaPredicted RBP17.69■□□□□ 0.42
XRCC6-201ENST00000359308 LRRC7Q96NW7 1537 aa17.69■□□□□ 0.42
XRCC6-201ENST00000359308 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
XRCC6-201ENST00000359308 RIPK4P57078 832 aa17.68■□□□□ 0.42
XRCC6-201ENST00000359308 NUDT16Q96DE0 195 aaKnown RBP17.68■□□□□ 0.42
XRCC6-201ENST00000359308 EXOSC9Q06265 439 aaKnown RBP17.68■□□□□ 0.42
XRCC6-201ENST00000359308 TMEM2Q9UHN6 1383 aa17.68■□□□□ 0.42
XRCC6-201ENST00000359308 CPSF1Q10570 1443 aaKnown RBP17.67■□□□□ 0.42
XRCC6-201ENST00000359308 HMOX1P09601 288 aa17.66■□□□□ 0.42
XRCC6-201ENST00000359308 NUTM2FA1L443 756 aa17.66■□□□□ 0.42
XRCC6-201ENST00000359308 PRKAR2BP31323 418 aa17.66■□□□□ 0.42
XRCC6-201ENST00000359308 NBR1Q14596 966 aa17.66■□□□□ 0.42
XRCC6-201ENST00000359308 KNDC1Q76NI1 1749 aa17.66■□□□□ 0.42
XRCC6-201ENST00000359308 ROBO2Q9HCK4 1378 aa17.66■□□□□ 0.42
XRCC6-201ENST00000359308 CPS1P31327 1500 aa17.65■□□□□ 0.42
XRCC6-201ENST00000359308 EDC4Q6P2E9 1401 aaKnown RBP17.65■□□□□ 0.42
XRCC6-201ENST00000359308 PRR36Q9H6K5 1346 aa17.65■□□□□ 0.42
XRCC6-201ENST00000359308 LTKP29376 864 aa17.64■□□□□ 0.42
XRCC6-201ENST00000359308 C8orf34Q49A92 452 aa17.64■□□□□ 0.42
XRCC6-201ENST00000359308 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
XRCC6-201ENST00000359308 TECPR2O15040 1411 aa17.64■□□□□ 0.41
XRCC6-201ENST00000359308 ADAMTS13Q76LX8 1427 aa17.64■□□□□ 0.41
XRCC6-201ENST00000359308 CDC42BPGQ6DT37 1551 aa17.64■□□□□ 0.41
XRCC6-201ENST00000359308 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
XRCC6-201ENST00000359308 RSPH6AQ9H0K4 717 aa17.63■□□□□ 0.41
XRCC6-201ENST00000359308 PCDHB15Q9Y5E8 787 aa17.63■□□□□ 0.41
XRCC6-201ENST00000359308 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
XRCC6-201ENST00000359308 SMC4Q9NTJ3 1288 aa17.63■□□□□ 0.41
XRCC6-201ENST00000359308 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
XRCC6-201ENST00000359308 HDGFP51858 240 aaKnown RBP17.63■□□□□ 0.41
XRCC6-201ENST00000359308 PHACTR3Q96KR7 559 aa17.63■□□□□ 0.41
XRCC6-201ENST00000359308 SLC26A8Q96RN1 970 aa17.62■□□□□ 0.41
XRCC6-201ENST00000359308 MON2Q7Z3U7 1717 aa17.62■□□□□ 0.41
XRCC6-201ENST00000359308 FAM161AQ3B820 660 aa17.62■□□□□ 0.41
XRCC6-201ENST00000359308 SSH1Q8WYL5 1049 aa17.62■□□□□ 0.41
XRCC6-201ENST00000359308 THUMPD2Q9BTF0 503 aaKnown RBP17.61■□□□□ 0.41
XRCC6-201ENST00000359308 FCHSD2O94868 740 aa17.61■□□□□ 0.41
XRCC6-201ENST00000359308 ITSN1Q15811 1721 aa17.6■□□□□ 0.41
XRCC6-201ENST00000359308 ZKSCAN2Q63HK3 967 aa17.6■□□□□ 0.41
XRCC6-201ENST00000359308 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
XRCC6-201ENST00000359308 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
XRCC6-201ENST00000359308 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.6■□□□□ 0.41
XRCC6-201ENST00000359308 AKAP12Q02952 1782 aa17.59■□□□□ 0.41
XRCC6-201ENST00000359308 COG3Q96JB2 828 aa17.59■□□□□ 0.41
XRCC6-201ENST00000359308 C3P01024 1663 aa17.58■□□□□ 0.4
XRCC6-201ENST00000359308 TRIM27P14373 513 aa17.58■□□□□ 0.4
XRCC6-201ENST00000359308 IL13P35225 146 aa17.58■□□□□ 0.4
XRCC6-201ENST00000359308 MVPQ14764 893 aaKnown RBP17.58■□□□□ 0.4
XRCC6-201ENST00000359308 DZIP1LQ8IYY4 767 aaKnown RBP17.57■□□□□ 0.4
XRCC6-201ENST00000359308 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
XRCC6-201ENST00000359308 CDK12Q9NYV4 1490 aaPredicted RBP17.57■□□□□ 0.4
XRCC6-201ENST00000359308 IL16Q14005 1332 aa17.57■□□□□ 0.4
XRCC6-201ENST00000359308 SIRT1Q96EB6 747 aa17.56■□□□□ 0.4
XRCC6-201ENST00000359308 PTPRUQ92729 1446 aa17.56■□□□□ 0.4
XRCC6-201ENST00000359308 NEFMP07197 916 aa17.56■□□□□ 0.4
XRCC6-201ENST00000359308 CT47B1P0C2W7 299 aaPredicted RBP17.56■□□□□ 0.4
XRCC6-201ENST00000359308 NOB1Q9ULX3 412 aaKnown RBP17.56■□□□□ 0.4
XRCC6-201ENST00000359308 PLEKHG1Q9ULL1 1385 aa17.55■□□□□ 0.4
XRCC6-201ENST00000359308 NFE2L2Q16236 605 aa17.55■□□□□ 0.4
XRCC6-201ENST00000359308 PMFBP1Q8TBY8 1022 aa17.54■□□□□ 0.4
XRCC6-201ENST00000359308 AATKQ6ZMQ8 1374 aa17.54■□□□□ 0.4
XRCC6-201ENST00000359308 ACEP12821 1306 aa17.54■□□□□ 0.4
XRCC6-201ENST00000359308 SLC4A3P48751 1232 aa17.54■□□□□ 0.4
XRCC6-201ENST00000359308 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
XRCC6-201ENST00000359308 SOX12O15370 315 aa17.53■□□□□ 0.4
XRCC6-201ENST00000359308 ATF7IPQ6VMQ6 1270 aa17.53■□□□□ 0.4
XRCC6-201ENST00000359308 DLG5Q8TDM6 1919 aa17.52■□□□□ 0.4
XRCC6-201ENST00000359308 VIRMAQ69YN4 1812 aaKnown RBP17.52■□□□□ 0.39
XRCC6-201ENST00000359308 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
XRCC6-201ENST00000359308 TOPAZ1Q8N9V7 1692 aa17.51■□□□□ 0.39
XRCC6-201ENST00000359308 TTC21BQ7Z4L5 1316 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 225.7 ms