RNA–Protein interactions for RNA: ENST00000358506.6

PPP1CB-202, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPP1CB, Length 4,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-202ENST00000358506 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
PPP1CB-202ENST00000358506 INTS3Q68E01 1043 aaKnown RBP20.37■□□□□ 0.85
PPP1CB-202ENST00000358506 AIMP1Q12904 312 aaKnown RBP20.37■□□□□ 0.85
PPP1CB-202ENST00000358506 SKAP1Q86WV1 359 aa20.37■□□□□ 0.85
PPP1CB-202ENST00000358506 UHRF1BP1Q6BDS2 1440 aa20.37■□□□□ 0.85
PPP1CB-202ENST00000358506 DDX11L8A8MPP1 907 aa20.36■□□□□ 0.85
PPP1CB-202ENST00000358506 PER1O15534 1290 aaPredicted RBP20.36■□□□□ 0.85
PPP1CB-202ENST00000358506 ANO2Q9NQ90 1003 aa20.36■□□□□ 0.85
PPP1CB-202ENST00000358506 GNAI3P08754 354 aa20.36■□□□□ 0.85
PPP1CB-202ENST00000358506 IFIT2P09913 472 aaKnown RBP20.36■□□□□ 0.85
PPP1CB-202ENST00000358506 PLEKHO1Q53GL0 409 aaPredicted RBP20.36■□□□□ 0.85
PPP1CB-202ENST00000358506 GSE1Q14687 1217 aa20.35■□□□□ 0.85
PPP1CB-202ENST00000358506 SSH1Q8WYL5 1049 aa20.35■□□□□ 0.85
PPP1CB-202ENST00000358506 GCC1Q96CN9 775 aa20.35■□□□□ 0.85
PPP1CB-202ENST00000358506 CHMP5Q9NZZ3 219 aa20.35■□□□□ 0.85
PPP1CB-202ENST00000358506 CDC45O75419 566 aa20.35■□□□□ 0.85
PPP1CB-202ENST00000358506 ZNF428Q96B54 188 aa20.35■□□□□ 0.85
PPP1CB-202ENST00000358506 HSP90B1P14625 803 aaKnown RBP20.34■□□□□ 0.85
PPP1CB-202ENST00000358506 NSD2O96028 1365 aa20.34■□□□□ 0.85
PPP1CB-202ENST00000358506 TMEM57Q8N5G2 664 aa20.34■□□□□ 0.85
PPP1CB-202ENST00000358506 AMOTL2Q9Y2J4 779 aa20.34■□□□□ 0.85
PPP1CB-202ENST00000358506 G3BP1Q13283 466 aaKnown RBP eCLIP20.33■□□□□ 0.851e-6■□□□□ 11
PPP1CB-202ENST00000358506 DCTN1Q14203 1278 aa20.33■□□□□ 0.85
PPP1CB-202ENST00000358506 ASXL1Q8IXJ9 1541 aa20.33■□□□□ 0.84
PPP1CB-202ENST00000358506 HDGFL1Q5TGJ6 251 aa20.33■□□□□ 0.84
PPP1CB-202ENST00000358506 SYAP1Q96A49 352 aaPredicted RBP20.33■□□□□ 0.84
PPP1CB-202ENST00000358506 HSP90AB4PQ58FF6 505 aa20.32■□□□□ 0.84
PPP1CB-202ENST00000358506 RIC3Q7Z5B4 369 aa20.32■□□□□ 0.84
PPP1CB-202ENST00000358506 RUFY2Q8WXA3 655 aa20.32■□□□□ 0.84
PPP1CB-202ENST00000358506 ABCC11Q96J66 1382 aa20.32■□□□□ 0.84
PPP1CB-202ENST00000358506 NFKBIBQ15653 356 aa20.31■□□□□ 0.84
PPP1CB-202ENST00000358506 MSNP26038 577 aaKnown RBP20.31■□□□□ 0.84
PPP1CB-202ENST00000358506 GNL2Q13823 731 aaKnown RBP20.31■□□□□ 0.84
PPP1CB-202ENST00000358506 ZNF530Q6P9A1 599 aaPredicted RBP20.3■□□□□ 0.84
PPP1CB-202ENST00000358506 DDX49Q9Y6V7 483 aaKnown RBP20.3■□□□□ 0.84
PPP1CB-202ENST00000358506 GCC2Q8IWJ2 1684 aa20.3■□□□□ 0.84
PPP1CB-202ENST00000358506 FBLN1P23142 703 aa20.3■□□□□ 0.84
PPP1CB-202ENST00000358506 EIF2AK4Q9P2K8 1649 aaKnown RBP20.3■□□□□ 0.84
PPP1CB-202ENST00000358506 SURF6O75683 361 aaKnown RBP20.3■□□□□ 0.84
PPP1CB-202ENST00000358506 MCM10Q7L590 875 aa20.3■□□□□ 0.84
PPP1CB-202ENST00000358506 LRPPRCP42704 1394 aaKnown RBP20.3■□□□□ 0.84
PPP1CB-202ENST00000358506 CARD14Q9BXL6 1004 aa20.29■□□□□ 0.84
PPP1CB-202ENST00000358506 XPCQ01831 940 aaPredicted RBP20.29■□□□□ 0.84
PPP1CB-202ENST00000358506 FYB1O15117 783 aa20.29■□□□□ 0.84
PPP1CB-202ENST00000358506 GNAI2P04899 355 aa20.29■□□□□ 0.84
PPP1CB-202ENST00000358506 FOXD4L6Q3SYB3 417 aaPredicted RBP20.28■□□□□ 0.84
PPP1CB-202ENST00000358506 FOXD4L3Q6VB84 417 aaPredicted RBP20.28■□□□□ 0.84
PPP1CB-202ENST00000358506 ANKRD36BQ8N2N9 1353 aa20.28■□□□□ 0.84
PPP1CB-202ENST00000358506 GLIPR1L2Q4G1C9 344 aa20.27■□□□□ 0.84
PPP1CB-202ENST00000358506 MIS18AQ9NYP9 233 aa20.27■□□□□ 0.84
PPP1CB-202ENST00000358506 SYTL4Q96C24 671 aaPredicted RBP20.27■□□□□ 0.84
PPP1CB-202ENST00000358506 GTF2E1P29083 439 aaPredicted RBP20.27■□□□□ 0.83
PPP1CB-202ENST00000358506 CCT4P50991 539 aaKnown RBP20.27■□□□□ 0.83
PPP1CB-202ENST00000358506 HTATSF1O43719 755 aaKnown RBP20.26■□□□□ 0.83
PPP1CB-202ENST00000358506 KDM6BO15054 1643 aa20.26■□□□□ 0.83
PPP1CB-202ENST00000358506 MBD5Q9P267 1494 aa20.26■□□□□ 0.83
PPP1CB-202ENST00000358506 CHD1LQ86WJ1 897 aa20.26■□□□□ 0.83
PPP1CB-202ENST00000358506 IFT57Q9NWB7 429 aa20.26■□□□□ 0.83
PPP1CB-202ENST00000358506 ZKSCAN1P17029 563 aaPredicted RBP20.26■□□□□ 0.83
PPP1CB-202ENST00000358506 COL17A1Q9UMD9 1497 aaPredicted RBP20.25■□□□□ 0.83
PPP1CB-202ENST00000358506 ABCA8O94911 1581 aa20.24■□□□□ 0.83
PPP1CB-202ENST00000358506 ERC2O15083 957 aa20.24■□□□□ 0.83
PPP1CB-202ENST00000358506 ALDH1L2Q3SY69 923 aa20.24■□□□□ 0.83
PPP1CB-202ENST00000358506 RBM33Q96EV2 1170 aaKnown RBP20.24■□□□□ 0.83
PPP1CB-202ENST00000358506 TNRQ92752 1358 aa20.24■□□□□ 0.83
PPP1CB-202ENST00000358506 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
PPP1CB-202ENST00000358506 SKOR2Q2VWA4 1001 aaPredicted RBP20.23■□□□□ 0.83
PPP1CB-202ENST00000358506 DRC7Q8IY82 874 aa20.23■□□□□ 0.83
PPP1CB-202ENST00000358506 GOLGA6L6A8MZA4 724 aa20.23■□□□□ 0.83
PPP1CB-202ENST00000358506 CLASRPQ8N2M8 674 aaKnown RBP20.23■□□□□ 0.83
PPP1CB-202ENST00000358506 ATP7AQ04656 1500 aa20.23■□□□□ 0.83
PPP1CB-202ENST00000358506 MAST1Q9Y2H9 1570 aa20.22■□□□□ 0.83
PPP1CB-202ENST00000358506 CSPP1Q1MSJ5 1256 aa20.22■□□□□ 0.83
PPP1CB-202ENST00000358506 TRIM27P14373 513 aa20.22■□□□□ 0.83
PPP1CB-202ENST00000358506 GNAT3A8MTJ3 354 aa20.21■□□□□ 0.83
PPP1CB-202ENST00000358506 SRCIN1Q9C0H9 1055 aa20.21■□□□□ 0.83
PPP1CB-202ENST00000358506 ACEP12821 1306 aa20.21■□□□□ 0.83
PPP1CB-202ENST00000358506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.21■□□□□ 0.831e-15■■□□□ 13.7
PPP1CB-202ENST00000358506 UHRF1BP1LA0JNW5 1464 aa20.2■□□□□ 0.82
PPP1CB-202ENST00000358506 SPATA31E1Q6ZUB1 1445 aa20.2■□□□□ 0.82
PPP1CB-202ENST00000358506 POLR3AO14802 1390 aaPredicted RBP20.2■□□□□ 0.82
PPP1CB-202ENST00000358506 PUS7Q96PZ0 661 aaKnown RBP20.2■□□□□ 0.82
PPP1CB-202ENST00000358506 PHF8Q9UPP1 1060 aa20.2■□□□□ 0.82
PPP1CB-202ENST00000358506 ZC3H6P61129 1189 aaKnown RBP20.2■□□□□ 0.82
PPP1CB-202ENST00000358506 TOMM22Q9NS69 142 aa20.2■□□□□ 0.82
PPP1CB-202ENST00000358506 ARHGEF5Q12774 1597 aa20.19■□□□□ 0.82
PPP1CB-202ENST00000358506 NRDCO43847 1150 aa20.19■□□□□ 0.82
PPP1CB-202ENST00000358506 RIMS2Q9UQ26 1411 aa20.18■□□□□ 0.82
PPP1CB-202ENST00000358506 FRAT2O75474 233 aaPredicted RBP20.18■□□□□ 0.82
PPP1CB-202ENST00000358506 RPAP2Q8IXW5 612 aaPredicted RBP20.18■□□□□ 0.82
PPP1CB-202ENST00000358506 KIF3AQ9Y496 699 aa20.18■□□□□ 0.82
PPP1CB-202ENST00000358506 PLEKHH1Q9ULM0 1364 aa20.18■□□□□ 0.82
PPP1CB-202ENST00000358506 KCNH5Q8NCM2 988 aa20.18■□□□□ 0.82
PPP1CB-202ENST00000358506 ADGBQ8N7X0 1667 aa20.17■□□□□ 0.82
PPP1CB-202ENST00000358506 MSH5O43196 834 aa20.17■□□□□ 0.82
PPP1CB-202ENST00000358506 NUCB2P80303 420 aa20.17■□□□□ 0.82
PPP1CB-202ENST00000358506 ATP6V1DQ9Y5K8 247 aa20.17■□□□□ 0.82
PPP1CB-202ENST00000358506 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
PPP1CB-202ENST00000358506 USHBP1Q8N6Y0 703 aa20.17■□□□□ 0.82
PPP1CB-202ENST00000358506 NEUROD6Q96NK8 337 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms