RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 USP19O94966 1318 aa10.47□□□□□ -0.73
CD46-205ENST00000358170 FAM83GA6ND36 823 aa10.47□□□□□ -0.73
CD46-205ENST00000358170 FOXD4L1Q9NU39 408 aa10.47□□□□□ -0.73
CD46-205ENST00000358170 ARAP3Q8WWN8 1544 aa10.47□□□□□ -0.73
CD46-205ENST00000358170 VWDEQ8N2E2 1590 aa10.47□□□□□ -0.73
CD46-205ENST00000358170 DEPDC5O75140 1603 aa10.47□□□□□ -0.73
CD46-205ENST00000358170 TSPYL6Q8N831 410 aa10.46□□□□□ -0.73
CD46-205ENST00000358170 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.73
CD46-205ENST00000358170 PLEKHF1Q96S99 279 aa10.46□□□□□ -0.74
CD46-205ENST00000358170 POLKQ9UBT6 870 aa10.46□□□□□ -0.74
CD46-205ENST00000358170 DDX19BQ9UMR2 479 aa10.46□□□□□ -0.74
CD46-205ENST00000358170 PHF23Q9BUL5 403 aaPredicted RBP10.45□□□□□ -0.74
CD46-205ENST00000358170 CCDC27Q2M243 656 aa10.45□□□□□ -0.74
CD46-205ENST00000358170 IPO8O15397 1037 aaKnown RBP10.45□□□□□ -0.74
CD46-205ENST00000358170 ABCC3O15438 1527 aa10.44□□□□□ -0.74
CD46-205ENST00000358170 ADGRB3O60242 1522 aa10.44□□□□□ -0.74
CD46-205ENST00000358170 TBC1D2Q9BYX2 928 aa10.44□□□□□ -0.74
CD46-205ENST00000358170 C22orf23Q9BZE7 217 aa10.44□□□□□ -0.74
CD46-205ENST00000358170 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
CD46-205ENST00000358170 MLH3Q9UHC1 1453 aa10.43□□□□□ -0.74
CD46-205ENST00000358170 ATAD2Q6PL18 1390 aa10.43□□□□□ -0.74
CD46-205ENST00000358170 ADGRB1O14514 1584 aa10.43□□□□□ -0.74
CD46-205ENST00000358170 KRT24Q2M2I5 525 aa10.43□□□□□ -0.74
CD46-205ENST00000358170 TULP4Q9NRJ4 1543 aa10.43□□□□□ -0.74
CD46-205ENST00000358170 YTHDC2Q9H6S0 1430 aaKnown RBP10.42□□□□□ -0.74
CD46-205ENST00000358170 QRICH2Q9H0J4 1663 aa10.42□□□□□ -0.74
CD46-205ENST00000358170 HSP90AA1P07900 732 aaKnown RBP10.42□□□□□ -0.74
CD46-205ENST00000358170 NRXN1Q9ULB1 1477 aa10.42□□□□□ -0.74
CD46-205ENST00000358170 FRMPD1Q5SYB0 1578 aa10.42□□□□□ -0.74
CD46-205ENST00000358170 COG3Q96JB2 828 aa10.42□□□□□ -0.74
CD46-205ENST00000358170 PNNQ9H307 717 aaKnown RBP10.42□□□□□ -0.74
CD46-205ENST00000358170 MIS18AQ9NYP9 233 aa10.42□□□□□ -0.74
CD46-205ENST00000358170 ABCC11Q96J66 1382 aa10.42□□□□□ -0.74
CD46-205ENST00000358170 FCHSD2O94868 740 aa10.42□□□□□ -0.74
CD46-205ENST00000358170 AEBP1Q8IUX7 1158 aa10.41□□□□□ -0.74
CD46-205ENST00000358170 NUDT16Q96DE0 195 aaKnown RBP10.41□□□□□ -0.74
CD46-205ENST00000358170 TBC1D32Q96NH3 1257 aa10.41□□□□□ -0.74
CD46-205ENST00000358170 NINLQ9Y2I6 1382 aa10.41□□□□□ -0.74
CD46-205ENST00000358170 GLI2P10070 1586 aa10.4□□□□□ -0.74
CD46-205ENST00000358170 SLC26A8Q96RN1 970 aa10.4□□□□□ -0.74
CD46-205ENST00000358170 C8orf58Q8NAV2 365 aa10.4□□□□□ -0.74
CD46-205ENST00000358170 RSPH6AQ9H0K4 717 aa10.4□□□□□ -0.74
CD46-205ENST00000358170 TWISTNBQ3B726 338 aaPredicted RBP10.4□□□□□ -0.75
CD46-205ENST00000358170 SULT6B1Q6IMI4 303 aa10.4□□□□□ -0.75
CD46-205ENST00000358170 MBIPQ9NS73 344 aa10.4□□□□□ -0.75
CD46-205ENST00000358170 ZBTB40Q9NUA8 1239 aa10.4□□□□□ -0.75
CD46-205ENST00000358170 NSD2O96028 1365 aa10.39□□□□□ -0.75
CD46-205ENST00000358170 KIAA1210Q9ULL0 1709 aa10.39□□□□□ -0.75
CD46-205ENST00000358170 NFE2L2Q16236 605 aa10.39□□□□□ -0.75
CD46-205ENST00000358170 NUTM2GQ5VZR2 741 aa10.39□□□□□ -0.75
CD46-205ENST00000358170 MCM10Q7L590 875 aa10.39□□□□□ -0.75
CD46-205ENST00000358170 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
CD46-205ENST00000358170 HECW2Q9P2P5 1572 aa10.39□□□□□ -0.75
CD46-205ENST00000358170 KIF16BQ96L93 1317 aa10.39□□□□□ -0.75
CD46-205ENST00000358170 WASLO00401 505 aaPredicted RBP10.39□□□□□ -0.75
CD46-205ENST00000358170 CEBPAP49715 358 aaPredicted RBP10.39□□□□□ -0.75
CD46-205ENST00000358170 ZBTB7CA1YPR0 619 aa10.38□□□□□ -0.75
CD46-205ENST00000358170 VAMP4O75379 141 aa10.38□□□□□ -0.75
CD46-205ENST00000358170 SLC4A10Q6U841 1118 aa10.38□□□□□ -0.75
CD46-205ENST00000358170 C14orf37Q86TY3 774 aa10.38□□□□□ -0.75
CD46-205ENST00000358170 LMTK2Q8IWU2 1503 aa10.38□□□□□ -0.75
CD46-205ENST00000358170 CHD1LQ86WJ1 897 aa10.38□□□□□ -0.75
CD46-205ENST00000358170 HSCBQ8IWL3 235 aa10.38□□□□□ -0.75
CD46-205ENST00000358170 PUS7Q96PZ0 661 aaKnown RBP10.38□□□□□ -0.75
CD46-205ENST00000358170 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
CD46-205ENST00000358170 HSP90AB1P08238 724 aaKnown RBP10.37□□□□□ -0.75
CD46-205ENST00000358170 LTV1Q96GA3 475 aaPredicted RBP10.37□□□□□ -0.75
CD46-205ENST00000358170 IQSEC2Q5JU85 1478 aa10.37□□□□□ -0.75
CD46-205ENST00000358170 GNAI1P63096 354 aa10.37□□□□□ -0.75
CD46-205ENST00000358170 CCDC61Q9Y6R9 512 aa10.37□□□□□ -0.75
CD46-205ENST00000358170 SETBP1Q9Y6X0 1596 aa10.36□□□□□ -0.75
CD46-205ENST00000358170 EIF5BO60841 1220 aaKnown RBP10.36□□□□□ -0.75
CD46-205ENST00000358170 AAMPQ13685 434 aa10.36□□□□□ -0.75
CD46-205ENST00000358170 RBM42Q9BTD8 480 aaKnown RBP10.36□□□□□ -0.75
CD46-205ENST00000358170 NEXMIFQ5QGS0 1516 aa10.36□□□□□ -0.75
CD46-205ENST00000358170 CAMSAP1Q5T5Y3 1602 aa10.36□□□□□ -0.75
CD46-205ENST00000358170 CT47B1P0C2W7 299 aaPredicted RBP10.36□□□□□ -0.75
CD46-205ENST00000358170 HDAC1Q13547 482 aaPredicted RBP10.36□□□□□ -0.75
CD46-205ENST00000358170 HSP90AB2PQ58FF8 381 aa10.36□□□□□ -0.75
CD46-205ENST00000358170 PPLO60437 1756 aa10.36□□□□□ -0.75
CD46-205ENST00000358170 C16orf71Q8IYS4 520 aaPredicted RBP10.35□□□□□ -0.75
CD46-205ENST00000358170 SMC5Q8IY18 1101 aa10.35□□□□□ -0.75
CD46-205ENST00000358170 SIGLEC1Q9BZZ2 1709 aa10.35□□□□□ -0.75
CD46-205ENST00000358170 SHPRHQ149N8 1683 aa10.35□□□□□ -0.75
CD46-205ENST00000358170 METP08581 1390 aa10.35□□□□□ -0.75
CD46-205ENST00000358170 IL13P35225 146 aa10.35□□□□□ -0.75
CD46-205ENST00000358170 MRPL50Q8N5N7 158 aaKnown RBP10.35□□□□□ -0.75
CD46-205ENST00000358170 ZBTB7BO15156 539 aaPredicted RBP10.34□□□□□ -0.75
CD46-205ENST00000358170 SMARCA5O60264 1052 aaPredicted RBP10.34□□□□□ -0.75
CD46-205ENST00000358170 RBM33Q96EV2 1170 aaKnown RBP10.34□□□□□ -0.75
CD46-205ENST00000358170 FOXO3O43524 673 aa10.34□□□□□ -0.75
CD46-205ENST00000358170 NUCB1Q02818 461 aa10.34□□□□□ -0.75
CD46-205ENST00000358170 PPIP5K1Q6PFW1 1433 aa10.34□□□□□ -0.75
CD46-205ENST00000358170 RIMS2Q9UQ26 1411 aa10.33□□□□□ -0.76
CD46-205ENST00000358170 CALD1Q05682 793 aaKnown RBP10.33□□□□□ -0.76
CD46-205ENST00000358170 IFT172Q9UG01 1749 aa10.33□□□□□ -0.76
CD46-205ENST00000358170 PTPRMP28827 1452 aa10.33□□□□□ -0.76
CD46-205ENST00000358170 IL16Q14005 1332 aa10.33□□□□□ -0.76
CD46-205ENST00000358170 NEO1Q92859 1461 aa10.33□□□□□ -0.76
CD46-205ENST00000358170 F6X3S4 739 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms