RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
NCDN-201ENST00000356090 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
NCDN-201ENST00000356090 RTEL1-TNFRSF6BF6WH68 1400 aa16.63■□□□□ 0.25
NCDN-201ENST00000356090 SOX12O15370 315 aa16.63■□□□□ 0.25
NCDN-201ENST00000356090 ATP7AQ04656 1500 aa16.62■□□□□ 0.25
NCDN-201ENST00000356090 ABCA6Q8N139 1617 aa16.62■□□□□ 0.25
NCDN-201ENST00000356090 FYB1O15117 783 aa16.62■□□□□ 0.25
NCDN-201ENST00000356090 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
NCDN-201ENST00000356090 NUCB1Q02818 461 aa16.62■□□□□ 0.25
NCDN-201ENST00000356090 ZNF518AQ6AHZ1 1483 aa16.62■□□□□ 0.25
NCDN-201ENST00000356090 CEP152O94986 1710 aa16.62■□□□□ 0.25
NCDN-201ENST00000356090 CT47B1P0C2W7 299 aaPredicted RBP16.61■□□□□ 0.25
NCDN-201ENST00000356090 SSFA2P28290 1259 aa16.61■□□□□ 0.25
NCDN-201ENST00000356090 ZFYVE16Q7Z3T8 1539 aa16.61■□□□□ 0.25
NCDN-201ENST00000356090 ESPNB1AK53 854 aa16.61■□□□□ 0.25
NCDN-201ENST00000356090 CHD1O14646 1710 aa16.61■□□□□ 0.25
NCDN-201ENST00000356090 ANKRD36BQ8N2N9 1353 aa16.61■□□□□ 0.25
NCDN-201ENST00000356090 TSPYL6Q8N831 410 aa16.61■□□□□ 0.25
NCDN-201ENST00000356090 A0A1W2PP64 1363 aa16.6■□□□□ 0.25
NCDN-201ENST00000356090 CD2BP2O95400 341 aaKnown RBP16.6■□□□□ 0.25
NCDN-201ENST00000356090 ZBTB7CA1YPR0 619 aa16.6■□□□□ 0.25
NCDN-201ENST00000356090 TBC1D9Q6ZT07 1266 aa16.6■□□□□ 0.25
NCDN-201ENST00000356090 MAP3K4Q9Y6R4 1608 aa16.6■□□□□ 0.25
NCDN-201ENST00000356090 FSD2A1L4K1 749 aa16.59■□□□□ 0.25
NCDN-201ENST00000356090 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
NCDN-201ENST00000356090 DCTN1Q14203 1278 aa16.59■□□□□ 0.25
NCDN-201ENST00000356090 IDI1Q13907 227 aa16.58■□□□□ 0.25
NCDN-201ENST00000356090 GAS2L3Q86XJ1 694 aa16.58■□□□□ 0.25
NCDN-201ENST00000356090 GLIPR1L2Q4G1C9 344 aa16.58■□□□□ 0.24
NCDN-201ENST00000356090 MCTP1Q6DN14 999 aa16.58■□□□□ 0.24
NCDN-201ENST00000356090 K7ELQ4 463 aaPredicted RBP16.58■□□□□ 0.24
NCDN-201ENST00000356090 PHACTR3Q96KR7 559 aa16.58■□□□□ 0.24
NCDN-201ENST00000356090 PLEKHF1Q96S99 279 aa16.58■□□□□ 0.24
NCDN-201ENST00000356090 SBNO2Q9Y2G9 1366 aa16.58■□□□□ 0.24
NCDN-201ENST00000356090 ZCCHC11Q5TAX3 1644 aaKnown RBP16.58■□□□□ 0.24
NCDN-201ENST00000356090 NOL8Q76FK4 1167 aaKnown RBP16.57■□□□□ 0.24
NCDN-201ENST00000356090 CDK19Q9BWU1 502 aa16.57■□□□□ 0.24
NCDN-201ENST00000356090 ATAD2Q6PL18 1390 aa16.57■□□□□ 0.24
NCDN-201ENST00000356090 TET3O43151 1660 aa16.56■□□□□ 0.24
NCDN-201ENST00000356090 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
NCDN-201ENST00000356090 MYOM2P54296 1465 aa16.56■□□□□ 0.24
NCDN-201ENST00000356090 CLCN1P35523 988 aa16.56■□□□□ 0.24
NCDN-201ENST00000356090 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
NCDN-201ENST00000356090 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
NCDN-201ENST00000356090 TWISTNBQ3B726 338 aaPredicted RBP16.55■□□□□ 0.24
NCDN-201ENST00000356090 EMILIN1Q9Y6C2 1016 aa16.55■□□□□ 0.24
NCDN-201ENST00000356090 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
NCDN-201ENST00000356090 FOXD4L6Q3SYB3 417 aaPredicted RBP16.55■□□□□ 0.24
NCDN-201ENST00000356090 BMP2KLQ5H9B9 411 aa16.55■□□□□ 0.24
NCDN-201ENST00000356090 FOXD4L3Q6VB84 417 aaPredicted RBP16.55■□□□□ 0.24
NCDN-201ENST00000356090 ARID3AQ99856 593 aa16.55■□□□□ 0.24
NCDN-201ENST00000356090 NASPP49321 788 aaPredicted RBP16.54■□□□□ 0.24
NCDN-201ENST00000356090 CAVIN1Q6NZI2 390 aaKnown RBP16.54■□□□□ 0.24
NCDN-201ENST00000356090 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
NCDN-201ENST00000356090 RBM25P49756 843 aaKnown RBP16.54■□□□□ 0.24
NCDN-201ENST00000356090 C16orf71Q8IYS4 520 aaPredicted RBP16.54■□□□□ 0.24
NCDN-201ENST00000356090 CHMP4BQ9H444 224 aaKnown RBP16.54■□□□□ 0.24
NCDN-201ENST00000356090 NUTM2FA1L443 756 aa16.54■□□□□ 0.24
NCDN-201ENST00000356090 CDC45O75419 566 aa16.54■□□□□ 0.24
NCDN-201ENST00000356090 WAPLQ7Z5K2 1190 aa16.54■□□□□ 0.24
NCDN-201ENST00000356090 ABCC11Q96J66 1382 aa16.53■□□□□ 0.24
NCDN-201ENST00000356090 NPATQ14207 1427 aa16.53■□□□□ 0.24
NCDN-201ENST00000356090 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
NCDN-201ENST00000356090 SKOR2Q2VWA4 1001 aaPredicted RBP16.53■□□□□ 0.24
NCDN-201ENST00000356090 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
NCDN-201ENST00000356090 MSNP26038 577 aaKnown RBP16.53■□□□□ 0.24
NCDN-201ENST00000356090 KIF1BO60333 1816 aa16.53■□□□□ 0.24
NCDN-201ENST00000356090 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.24
NCDN-201ENST00000356090 SHROOM2Q13796 1616 aa16.52■□□□□ 0.24
NCDN-201ENST00000356090 ZBTB7BO15156 539 aaPredicted RBP16.52■□□□□ 0.24
NCDN-201ENST00000356090 SMARCA5O60264 1052 aaPredicted RBP16.52■□□□□ 0.24
NCDN-201ENST00000356090 FCHSD2O94868 740 aa16.52■□□□□ 0.24
NCDN-201ENST00000356090 SLC4A10Q6U841 1118 aa16.52■□□□□ 0.24
NCDN-201ENST00000356090 ERBB4Q15303 1308 aa16.52■□□□□ 0.23
NCDN-201ENST00000356090 RPGRIP1LQ68CZ1 1315 aa16.52■□□□□ 0.23
NCDN-201ENST00000356090 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.23
NCDN-201ENST00000356090 GNAI1P63096 354 aa16.51■□□□□ 0.23
NCDN-201ENST00000356090 MLECQ14165 292 aa16.51■□□□□ 0.23
NCDN-201ENST00000356090 RAB3GAP1Q15042 981 aa16.51■□□□□ 0.23
NCDN-201ENST00000356090 ALDH1L2Q3SY69 923 aa16.51■□□□□ 0.23
NCDN-201ENST00000356090 NSD2O96028 1365 aa16.51■□□□□ 0.23
NCDN-201ENST00000356090 SNX21Q969T3 373 aa16.51■□□□□ 0.23
NCDN-201ENST00000356090 MBIPQ9NS73 344 aa16.51■□□□□ 0.23
NCDN-201ENST00000356090 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
NCDN-201ENST00000356090 VAMP4O75379 141 aa16.51■□□□□ 0.23
NCDN-201ENST00000356090 C8orf58Q8NAV2 365 aa16.5■□□□□ 0.23
NCDN-201ENST00000356090 CIZ1Q9ULV3 898 aaPredicted RBP16.5■□□□□ 0.23
NCDN-201ENST00000356090 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
NCDN-201ENST00000356090 KRT24Q2M2I5 525 aa16.5■□□□□ 0.23
NCDN-201ENST00000356090 CASC1Q6TDU7 716 aa16.49■□□□□ 0.23
NCDN-201ENST00000356090 IL16Q14005 1332 aa16.49■□□□□ 0.23
NCDN-201ENST00000356090 FBXO31Q5XUX0 539 aaPredicted RBP16.49■□□□□ 0.23
NCDN-201ENST00000356090 MRPL50Q8N5N7 158 aaKnown RBP16.49■□□□□ 0.23
NCDN-201ENST00000356090 OTUD7AQ8TE49 926 aaPredicted RBP16.49■□□□□ 0.23
NCDN-201ENST00000356090 ZMYM3Q14202 1370 aa16.49■□□□□ 0.23
NCDN-201ENST00000356090 NME9Q86XW9 330 aa16.48■□□□□ 0.23
NCDN-201ENST00000356090 POLKQ9UBT6 870 aa16.48■□□□□ 0.23
NCDN-201ENST00000356090 VIRMAQ69YN4 1812 aaKnown RBP16.48■□□□□ 0.23
NCDN-201ENST00000356090 PRPF40AO75400 957 aaKnown RBP16.48■□□□□ 0.23
NCDN-201ENST00000356090 CHAMP1Q96JM3 812 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms