RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 ERC1Q8IUD2 1116 aa18.68■□□□□ 0.58
PTPRO-202ENST00000348962 SLC3A2P08195 630 aaKnown RBP18.68■□□□□ 0.58
PTPRO-202ENST00000348962 BICD2Q8TD16 824 aa18.68■□□□□ 0.58
PTPRO-202ENST00000348962 GOLGA6L1Q8N7Z2 621 aa18.68■□□□□ 0.58
PTPRO-202ENST00000348962 VPS37CA5D8V6 355 aaPredicted RBP18.67■□□□□ 0.58
PTPRO-202ENST00000348962 CNKSR2Q8WXI2 1034 aa18.67■□□□□ 0.58
PTPRO-202ENST00000348962 PCMTD1Q96MG8 357 aaPredicted RBP18.67■□□□□ 0.58
PTPRO-202ENST00000348962 HMGXB3Q12766 1538 aa18.67■□□□□ 0.58
PTPRO-202ENST00000348962 CCAR1Q8IX12 1150 aaKnown RBP18.67■□□□□ 0.58
PTPRO-202ENST00000348962 CCDC61Q9Y6R9 512 aa18.67■□□□□ 0.58
PTPRO-202ENST00000348962 PSMA5P28066 241 aa18.66■□□□□ 0.58
PTPRO-202ENST00000348962 R3HCC1Q9Y3T6 440 aaKnown RBP18.66■□□□□ 0.58
PTPRO-202ENST00000348962 EHBP1L1Q8N3D4 1523 aa18.66■□□□□ 0.58
PTPRO-202ENST00000348962 KIAA0586Q9BVV6 1533 aa18.66■□□□□ 0.58
PTPRO-202ENST00000348962 PANK1Q8TE04 598 aa18.66■□□□□ 0.58
PTPRO-202ENST00000348962 KCNH5Q8NCM2 988 aa18.65■□□□□ 0.58
PTPRO-202ENST00000348962 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
PTPRO-202ENST00000348962 CCDC158Q5M9N0 1113 aa18.65■□□□□ 0.58
PTPRO-202ENST00000348962 EXOSC9Q06265 439 aaKnown RBP18.65■□□□□ 0.58
PTPRO-202ENST00000348962 HIP1O00291 1037 aa18.64■□□□□ 0.57
PTPRO-202ENST00000348962 ERBINQ96RT1 1412 aa18.64■□□□□ 0.57
PTPRO-202ENST00000348962 CDC45O75419 566 aa18.64■□□□□ 0.57
PTPRO-202ENST00000348962 CD109Q6YHK3 1445 aa18.63■□□□□ 0.57
PTPRO-202ENST00000348962 GNAI2P04899 355 aa18.63■□□□□ 0.57
PTPRO-202ENST00000348962 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
PTPRO-202ENST00000348962 ZC3H6P61129 1189 aaKnown RBP18.63■□□□□ 0.57
PTPRO-202ENST00000348962 DNAJC2Q99543 621 aaKnown RBP18.63■□□□□ 0.57
PTPRO-202ENST00000348962 MPHOSPH8Q99549 860 aa18.62■□□□□ 0.57
PTPRO-202ENST00000348962 CCDC73Q6ZRK6 1079 aa18.62■□□□□ 0.57
PTPRO-202ENST00000348962 SRCIN1Q9C0H9 1055 aa18.62■□□□□ 0.57
PTPRO-202ENST00000348962 MTMR7Q9Y216 660 aa18.62■□□□□ 0.57
PTPRO-202ENST00000348962 NUCB2P80303 420 aa18.61■□□□□ 0.57
PTPRO-202ENST00000348962 XPCQ01831 940 aaPredicted RBP18.61■□□□□ 0.57
PTPRO-202ENST00000348962 CCT4P50991 539 aaKnown RBP18.61■□□□□ 0.57
PTPRO-202ENST00000348962 NUDT16Q96DE0 195 aaKnown RBP18.61■□□□□ 0.57
PTPRO-202ENST00000348962 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTPRO-202ENST00000348962 TTC39AQ5SRH9 613 aa18.6■□□□□ 0.57
PTPRO-202ENST00000348962 CCDC57Q2TAC2 916 aa18.59■□□□□ 0.57
PTPRO-202ENST00000348962 CCDC70Q6NSX1 233 aa18.59■□□□□ 0.57
PTPRO-202ENST00000348962 CHMP5Q9NZZ3 219 aa18.59■□□□□ 0.57
PTPRO-202ENST00000348962 PRXQ9BXM0 1461 aa18.58■□□□□ 0.57
PTPRO-202ENST00000348962 HECW1Q76N89 1606 aa18.58■□□□□ 0.56
PTPRO-202ENST00000348962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.58■□□□□ 0.56
PTPRO-202ENST00000348962 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
PTPRO-202ENST00000348962 KRI1Q8N9T8 703 aaKnown RBP18.57■□□□□ 0.56
PTPRO-202ENST00000348962 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
PTPRO-202ENST00000348962 SLC4A3P48751 1232 aa18.57■□□□□ 0.56
PTPRO-202ENST00000348962 TSHZ2Q9NRE2 1034 aa18.57■□□□□ 0.56
PTPRO-202ENST00000348962 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
PTPRO-202ENST00000348962 CT47B1P0C2W7 299 aaPredicted RBP18.57■□□□□ 0.56
PTPRO-202ENST00000348962 C22orf23Q9BZE7 217 aa18.57■□□□□ 0.56
PTPRO-202ENST00000348962 STARD3NLO95772 234 aa18.56■□□□□ 0.56
PTPRO-202ENST00000348962 MYL6BP14649 208 aa18.56■□□□□ 0.56
PTPRO-202ENST00000348962 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.56■□□□□ 0.56
PTPRO-202ENST00000348962 BTBD11A6QL63 1104 aa18.55■□□□□ 0.56
PTPRO-202ENST00000348962 RRS1Q15050 365 aaKnown RBP18.55■□□□□ 0.56
PTPRO-202ENST00000348962 FOSBP53539 338 aa18.55■□□□□ 0.56
PTPRO-202ENST00000348962 GCC1Q96CN9 775 aa18.55■□□□□ 0.56
PTPRO-202ENST00000348962 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
PTPRO-202ENST00000348962 FCHSD2O94868 740 aa18.55■□□□□ 0.56
PTPRO-202ENST00000348962 SASS6Q6UVJ0 657 aa18.54■□□□□ 0.56
PTPRO-202ENST00000348962 RRP12Q5JTH9 1297 aaKnown RBP18.54■□□□□ 0.56
PTPRO-202ENST00000348962 DAPK1P53355 1430 aa18.54■□□□□ 0.56
PTPRO-202ENST00000348962 WDR63Q8IWG1 891 aa18.54■□□□□ 0.56
PTPRO-202ENST00000348962 CCAR2Q8N163 923 aaKnown RBP18.54■□□□□ 0.56
PTPRO-202ENST00000348962 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
PTPRO-202ENST00000348962 TSR2Q969E8 191 aaKnown RBP18.53■□□□□ 0.56
PTPRO-202ENST00000348962 CEP126Q9P2H0 1117 aa18.53■□□□□ 0.56
PTPRO-202ENST00000348962 ZSCAN25Q6NSZ9 544 aa18.53■□□□□ 0.56
PTPRO-202ENST00000348962 RBM5P52756 815 aaKnown RBP eCLIP18.51■□□□□ 0.55
PTPRO-202ENST00000348962 ATP2B2Q01814 1243 aa18.51■□□□□ 0.55
PTPRO-202ENST00000348962 NBPF8Q3BBV2 869 aa18.51■□□□□ 0.55
PTPRO-202ENST00000348962 PDCP20941 246 aa18.51■□□□□ 0.55
PTPRO-202ENST00000348962 NOB1Q9ULX3 412 aaKnown RBP18.51■□□□□ 0.55
PTPRO-202ENST00000348962 ZNF652Q9Y2D9 606 aa18.51■□□□□ 0.55
PTPRO-202ENST00000348962 EPRSP07814 1512 aaKnown RBP18.51■□□□□ 0.55
PTPRO-202ENST00000348962 PHF8Q9UPP1 1060 aa18.5■□□□□ 0.55
PTPRO-202ENST00000348962 CT47A1Q5JQC4 288 aaPredicted RBP18.5■□□□□ 0.55
PTPRO-202ENST00000348962 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
PTPRO-202ENST00000348962 PPP6R1Q9UPN7 881 aa18.5■□□□□ 0.55
PTPRO-202ENST00000348962 TOP2BQ02880 1626 aa18.5■□□□□ 0.55
PTPRO-202ENST00000348962 SDF4Q9BRK5 362 aa18.5■□□□□ 0.55
PTPRO-202ENST00000348962 SIL1Q9H173 461 aa18.5■□□□□ 0.55
PTPRO-202ENST00000348962 CCDC141Q6ZP82 1450 aa18.5■□□□□ 0.55
PTPRO-202ENST00000348962 WWC2Q6AWC2 1192 aa18.5■□□□□ 0.55
PTPRO-202ENST00000348962 ZNF428Q96B54 188 aa18.5■□□□□ 0.55
PTPRO-202ENST00000348962 GNAT3A8MTJ3 354 aa18.49■□□□□ 0.55
PTPRO-202ENST00000348962 MAGI1Q96QZ7 1491 aaPredicted RBP18.49■□□□□ 0.55
PTPRO-202ENST00000348962 IGHMBP2P38935 993 aaKnown RBP18.49■□□□□ 0.55
PTPRO-202ENST00000348962 OFD1O75665 1012 aa18.49■□□□□ 0.55
PTPRO-202ENST00000348962 MCM2P49736 904 aa18.49■□□□□ 0.55
PTPRO-202ENST00000348962 LRRCC1Q9C099 1032 aa18.49■□□□□ 0.55
PTPRO-202ENST00000348962 TMOD3Q9NYL9 352 aa18.49■□□□□ 0.55
PTPRO-202ENST00000348962 BICDL1Q6ZP65 573 aa18.48■□□□□ 0.55
PTPRO-202ENST00000348962 NGLY1Q96IV0 654 aa18.48■□□□□ 0.55
PTPRO-202ENST00000348962 AMOTL2Q9Y2J4 779 aa18.48■□□□□ 0.55
PTPRO-202ENST00000348962 WAPLQ7Z5K2 1190 aa18.48■□□□□ 0.55
PTPRO-202ENST00000348962 ATP2B1P20020 1258 aa18.48■□□□□ 0.55
PTPRO-202ENST00000348962 FOXO3O43524 673 aa18.48■□□□□ 0.55
PTPRO-202ENST00000348962 TXLNAP40222 546 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms