RNA–Protein interactions for RNA: ENST00000348761.2

CNTN1-202, Transcript of contactin 1, humanhuman

TSL 1 (best) BASIC

Gene CNTN1, Length 3,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-202ENST00000348761 hCG_2014768A0A024R1R8 64 aa6.94□□□□□ -1.3
CNTN1-202ENST00000348761 TAGLNQ01995 201 aaKnown RBP6.94□□□□□ -1.3
CNTN1-202ENST00000348761 AMOTL1Q8IY63 956 aa6.94□□□□□ -1.3
CNTN1-202ENST00000348761 KCNB2Q92953 911 aa6.94□□□□□ -1.3
CNTN1-202ENST00000348761 FBXO9Q9UK97 447 aaPredicted RBP6.94□□□□□ -1.3
CNTN1-202ENST00000348761 COMMD10Q9Y6G5 202 aa6.94□□□□□ -1.3
CNTN1-202ENST00000348761 HELBQ8NG08 1087 aaPredicted RBP6.94□□□□□ -1.3
CNTN1-202ENST00000348761 GIPC2Q8TF65 315 aa6.94□□□□□ -1.3
CNTN1-202ENST00000348761 PIF1Q9H611 641 aa6.94□□□□□ -1.3
CNTN1-202ENST00000348761 RRBP1Q9P2E9 1410 aaKnown RBP6.93□□□□□ -1.3
CNTN1-202ENST00000348761 EIF3JO75822 258 aaKnown RBP6.93□□□□□ -1.3
CNTN1-202ENST00000348761 PARP9Q8IXQ6 854 aa6.93□□□□□ -1.3
CNTN1-202ENST00000348761 CCDC146Q8IYE0 955 aa6.93□□□□□ -1.3
CNTN1-202ENST00000348761 G3BP2Q9UN86 482 aaKnown RBP6.93□□□□□ -1.3
CNTN1-202ENST00000348761 TIAM1Q13009 1591 aa6.93□□□□□ -1.3
CNTN1-202ENST00000348761 APPP05067 770 aa6.93□□□□□ -1.3
CNTN1-202ENST00000348761 IGBP1P78318 339 aa6.93□□□□□ -1.3
CNTN1-202ENST00000348761 ZCCHC11Q5TAX3 1644 aaKnown RBP6.93□□□□□ -1.3
CNTN1-202ENST00000348761 GLI2P10070 1586 aa6.93□□□□□ -1.3
CNTN1-202ENST00000348761 TSPOAP1O95153 1857 aa6.93□□□□□ -1.3
CNTN1-202ENST00000348761 EPRSP07814 1512 aaKnown RBP6.93□□□□□ -1.3
CNTN1-202ENST00000348761 ABCA8O94911 1581 aa6.93□□□□□ -1.3
CNTN1-202ENST00000348761 RFX1P22670 979 aa6.93□□□□□ -1.3
CNTN1-202ENST00000348761 LMOD3Q0VAK6 560 aa6.93□□□□□ -1.3
CNTN1-202ENST00000348761 MAP3K20Q9NYL2 800 aaKnown RBP6.93□□□□□ -1.3
CNTN1-202ENST00000348761 CTDP1Q9Y5B0 961 aaPredicted RBP6.93□□□□□ -1.3
CNTN1-202ENST00000348761 TLDC2A0PJX2 215 aa6.92□□□□□ -1.3
CNTN1-202ENST00000348761 POM121CA8CG34 1229 aa6.92□□□□□ -1.3
CNTN1-202ENST00000348761 RECKO95980 971 aa6.92□□□□□ -1.3
CNTN1-202ENST00000348761 CCDC85AQ96PX6 553 aaPredicted RBP6.92□□□□□ -1.3
CNTN1-202ENST00000348761 FYCO1Q9BQS8 1478 aa6.92□□□□□ -1.3
CNTN1-202ENST00000348761 GOLIM4O00461 696 aa6.92□□□□□ -1.3
CNTN1-202ENST00000348761 SRPK2P78362 688 aaKnown RBP6.92□□□□□ -1.3
CNTN1-202ENST00000348761 TCEAL1Q15170 157 aa6.92□□□□□ -1.3
CNTN1-202ENST00000348761 MIER1Q8N108 512 aa6.92□□□□□ -1.3
CNTN1-202ENST00000348761 BCL2L13Q9BXK5 485 aa6.92□□□□□ -1.3
CNTN1-202ENST00000348761 USTQ9Y2C2 406 aa6.92□□□□□ -1.3
CNTN1-202ENST00000348761 FRMD4BQ9Y2L6 1034 aa6.92□□□□□ -1.3
CNTN1-202ENST00000348761 WDR7Q9Y4E6 1490 aa6.91□□□□□ -1.3
CNTN1-202ENST00000348761 IRX3P78415 501 aaPredicted RBP6.91□□□□□ -1.3
CNTN1-202ENST00000348761 GPIHBP1Q8IV16 184 aa6.91□□□□□ -1.3
CNTN1-202ENST00000348761 KCNH8Q96L42 1107 aa6.91□□□□□ -1.3
CNTN1-202ENST00000348761 TPX2Q9ULW0 747 aaKnown RBP6.91□□□□□ -1.3
CNTN1-202ENST00000348761 NUB1Q9Y5A7 615 aa6.91□□□□□ -1.3
CNTN1-202ENST00000348761 STAG1Q8WVM7 1258 aa6.91□□□□□ -1.3
CNTN1-202ENST00000348761 SUPT16HQ9Y5B9 1047 aaKnown RBP6.91□□□□□ -1.3
CNTN1-202ENST00000348761 KAT6BQ8WYB5 2073 aa6.91□□□□□ -1.3
CNTN1-202ENST00000348761 PDAP1Q13442 181 aaKnown RBP6.91□□□□□ -1.3
CNTN1-202ENST00000348761 TTC30BQ8N4P2 665 aa6.91□□□□□ -1.3
CNTN1-202ENST00000348761 KLF15Q9UIH9 416 aa6.91□□□□□ -1.3
CNTN1-202ENST00000348761 TBX22Q9Y458 520 aa6.91□□□□□ -1.3
CNTN1-202ENST00000348761 KDM6BO15054 1643 aa6.9□□□□□ -1.3
CNTN1-202ENST00000348761 CALRP27797 417 aaKnown RBP6.9□□□□□ -1.3
CNTN1-202ENST00000348761 SF3A1Q15459 793 aaKnown RBP6.9□□□□□ -1.3
CNTN1-202ENST00000348761 PUS10Q3MIT2 529 aaKnown RBP6.9□□□□□ -1.3
CNTN1-202ENST00000348761 SDE2Q6IQ49 451 aa6.9□□□□□ -1.3
CNTN1-202ENST00000348761 RPUSD2Q8IZ73 545 aaKnown RBP6.9□□□□□ -1.3
CNTN1-202ENST00000348761 CEP120Q8N960 986 aa6.9□□□□□ -1.3
CNTN1-202ENST00000348761 GOPCQ9HD26 462 aa6.9□□□□□ -1.3
CNTN1-202ENST00000348761 TBX4P57082 545 aa6.9□□□□□ -1.31
CNTN1-202ENST00000348761 IRF2BPLQ9H1B7 796 aa6.9□□□□□ -1.31
CNTN1-202ENST00000348761 ARHGAP35Q9NRY4 1499 aa6.9□□□□□ -1.31
CNTN1-202ENST00000348761 NBPF9Q3BBW0 867 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 NPAS4Q8IUM7 802 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 PBXIP1Q96AQ6 731 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 RPS6KC1Q96S38 1066 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 WWC3Q9ULE0 1092 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 PDZRN3Q9UPQ7 1066 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 ATP10BO94823 1461 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 HMGB1P1B2RPK0 211 aaPredicted RBP6.89□□□□□ -1.31
CNTN1-202ENST00000348761 NRDCO43847 1150 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 ZNF513Q8N8E2 541 aaPredicted RBP6.89□□□□□ -1.31
CNTN1-202ENST00000348761 CLIP1P30622 1438 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 PPRC1Q5VV67 1664 aaKnown RBP6.89□□□□□ -1.31
CNTN1-202ENST00000348761 HOXA2O43364 376 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 E2F4Q16254 413 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 CCDC144BQ3MJ40 725 aa6.89□□□□□ -1.31
CNTN1-202ENST00000348761 MSL3Q8N5Y2 521 aaKnown RBP6.89□□□□□ -1.31
CNTN1-202ENST00000348761 MKRN1Q9UHC7 482 aaKnown RBP6.89□□□□□ -1.31
CNTN1-202ENST00000348761 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
CNTN1-202ENST00000348761 MAP3K4Q9Y6R4 1608 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 TMEM88BA6NKF7 163 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 RRP9O43818 475 aaKnown RBP6.88□□□□□ -1.31
CNTN1-202ENST00000348761 MLLT3P42568 568 aaPredicted RBP6.88□□□□□ -1.31
CNTN1-202ENST00000348761 PLEKHG6Q3KR16 790 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 DHX38Q92620 1227 aaKnown RBP6.88□□□□□ -1.31
CNTN1-202ENST00000348761 FHOD3Q2V2M9 1422 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 GCC2Q8IWJ2 1684 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 C7P10643 843 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 NOP9Q86U38 636 aaKnown RBP6.88□□□□□ -1.31
CNTN1-202ENST00000348761 MKL1Q969V6 931 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 SENP7Q9BQF6 1050 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 PUF60Q9UHX1 559 aaKnown RBP6.88□□□□□ -1.31
CNTN1-202ENST00000348761 TEX14Q8IWB6 1497 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 COL17A1Q9UMD9 1497 aaPredicted RBP6.88□□□□□ -1.31
CNTN1-202ENST00000348761 CD109Q6YHK3 1445 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 C9orf131Q5VYM1 1079 aa6.88□□□□□ -1.31
CNTN1-202ENST00000348761 CALR3Q96L12 384 aaKnown RBP6.88□□□□□ -1.31
CNTN1-202ENST00000348761 CT47B1P0C2W7 299 aaPredicted RBP6.87□□□□□ -1.31
CNTN1-202ENST00000348761 HNRNPUL2Q1KMD3 747 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms