RNA–Protein interactions for RNA: ENST00000344691.8

RUNX1-202, Transcript of runt related transcription factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RUNX1, Length 7,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-202ENST00000344691 USP47Q96K76 1375 aa18.27■□□□□ 0.51
RUNX1-202ENST00000344691 SEPT7Q16181 437 aaKnown RBP18.26■□□□□ 0.51
RUNX1-202ENST00000344691 CHMP5Q9NZZ3 219 aa18.26■□□□□ 0.51
RUNX1-202ENST00000344691 TTC16Q8NEE8 873 aa18.26■□□□□ 0.51
RUNX1-202ENST00000344691 PRPF40AO75400 957 aaKnown RBP18.26■□□□□ 0.51
RUNX1-202ENST00000344691 SF3B2Q13435 895 aaKnown RBP18.26■□□□□ 0.51
RUNX1-202ENST00000344691 XPCQ01831 940 aaPredicted RBP18.25■□□□□ 0.51
RUNX1-202ENST00000344691 API5Q9BZZ5 524 aaKnown RBP18.25■□□□□ 0.51
RUNX1-202ENST00000344691 SSR1P43307 286 aaKnown RBP18.25■□□□□ 0.51
RUNX1-202ENST00000344691 NASPP49321 788 aaPredicted RBP18.25■□□□□ 0.51
RUNX1-202ENST00000344691 ARGLU1Q9NWB6 273 aaPredicted RBP18.25■□□□□ 0.51
RUNX1-202ENST00000344691 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.51
RUNX1-202ENST00000344691 PHLDB1Q86UU1 1377 aa18.24■□□□□ 0.51
RUNX1-202ENST00000344691 FAM69CQ0P6D2 419 aa18.24■□□□□ 0.51
RUNX1-202ENST00000344691 RUNDC1Q96C34 613 aa18.24■□□□□ 0.51
RUNX1-202ENST00000344691 NAT10Q9H0A0 1025 aaKnown RBP18.24■□□□□ 0.51
RUNX1-202ENST00000344691 NINLQ9Y2I6 1382 aa18.24■□□□□ 0.51
RUNX1-202ENST00000344691 USP5P45974 858 aa18.24■□□□□ 0.51
RUNX1-202ENST00000344691 MPHOSPH10O00566 681 aaKnown RBP18.24■□□□□ 0.51
RUNX1-202ENST00000344691 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
RUNX1-202ENST00000344691 JPH4Q96JJ6 628 aa18.23■□□□□ 0.51
RUNX1-202ENST00000344691 SART3Q15020 963 aaKnown RBP18.23■□□□□ 0.51
RUNX1-202ENST00000344691 CCDC191Q8NCU4 936 aa18.23■□□□□ 0.51
RUNX1-202ENST00000344691 TRMT1LQ7Z2T5 733 aaKnown RBP18.23■□□□□ 0.51
RUNX1-202ENST00000344691 DEF6Q9H4E7 631 aa18.23■□□□□ 0.51
RUNX1-202ENST00000344691 NEK4P51957 841 aa18.23■□□□□ 0.51
RUNX1-202ENST00000344691 C11orf95C9JLR9 678 aaPredicted RBP18.22■□□□□ 0.51
RUNX1-202ENST00000344691 PSMD1Q99460 953 aa18.22■□□□□ 0.51
RUNX1-202ENST00000344691 ROCK1Q13464 1354 aa18.22■□□□□ 0.51
RUNX1-202ENST00000344691 SERPINC1P01008 464 aa18.22■□□□□ 0.51
RUNX1-202ENST00000344691 ACBD3Q9H3P7 528 aa18.21■□□□□ 0.51
RUNX1-202ENST00000344691 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.21■□□□□ 0.51
RUNX1-202ENST00000344691 KINO60870 393 aaKnown RBP18.21■□□□□ 0.51
RUNX1-202ENST00000344691 TAF3Q5VWG9 929 aa18.21■□□□□ 0.51
RUNX1-202ENST00000344691 PAXIP1Q6ZW49 1069 aaPredicted RBP18.21■□□□□ 0.51
RUNX1-202ENST00000344691 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
RUNX1-202ENST00000344691 NOM1Q5C9Z4 860 aaKnown RBP18.2■□□□□ 0.5
RUNX1-202ENST00000344691 CCDC18Q5T9S5 1454 aa18.19■□□□□ 0.5
RUNX1-202ENST00000344691 CCDC88BA6NC98 1476 aa18.19■□□□□ 0.5
RUNX1-202ENST00000344691 CT47B1P0C2W7 299 aaPredicted RBP18.19■□□□□ 0.5
RUNX1-202ENST00000344691 FILIP1LQ4L180 1135 aa18.19■□□□□ 0.5
RUNX1-202ENST00000344691 PRKRIP1Q9H875 184 aaPredicted RBP18.19■□□□□ 0.5
RUNX1-202ENST00000344691 TXLNAP40222 546 aa18.19■□□□□ 0.5
RUNX1-202ENST00000344691 RDXP35241 583 aaKnown RBP18.19■□□□□ 0.5
RUNX1-202ENST00000344691 NUCB2P80303 420 aa18.19■□□□□ 0.5
RUNX1-202ENST00000344691 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.19■□□□□ 0.5
RUNX1-202ENST00000344691 PSMA5P28066 241 aa18.18■□□□□ 0.5
RUNX1-202ENST00000344691 CLASRPQ8N2M8 674 aaKnown RBP18.18■□□□□ 0.5
RUNX1-202ENST00000344691 NEBLO76041 1014 aa18.18■□□□□ 0.5
RUNX1-202ENST00000344691 SLC3A2P08195 630 aaKnown RBP18.18■□□□□ 0.5
RUNX1-202ENST00000344691 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
RUNX1-202ENST00000344691 ECM2O94769 699 aaPredicted RBP18.18■□□□□ 0.5
RUNX1-202ENST00000344691 STK38Q15208 465 aa18.18■□□□□ 0.5
RUNX1-202ENST00000344691 TSR2Q969E8 191 aaKnown RBP18.18■□□□□ 0.5
RUNX1-202ENST00000344691 CCDC69A6NI79 296 aa18.17■□□□□ 0.5
RUNX1-202ENST00000344691 SLC4A8Q2Y0W8 1093 aa18.17■□□□□ 0.5
RUNX1-202ENST00000344691 SMARCE1Q969G3 411 aa18.17■□□□□ 0.5
RUNX1-202ENST00000344691 CABP4P57796 275 aa18.17■□□□□ 0.5
RUNX1-202ENST00000344691 GNAI1P63096 354 aa18.17■□□□□ 0.5
RUNX1-202ENST00000344691 DCTN1Q14203 1278 aa18.17■□□□□ 0.5
RUNX1-202ENST00000344691 CDCA7LQ96GN5 454 aa18.17■□□□□ 0.5
RUNX1-202ENST00000344691 TMX1Q9H3N1 280 aa18.17■□□□□ 0.5
RUNX1-202ENST00000344691 MTHFSP49914 203 aa18.16■□□□□ 0.5
RUNX1-202ENST00000344691 DHX8Q14562 1220 aaKnown RBP18.16■□□□□ 0.5
RUNX1-202ENST00000344691 NFKBIBQ15653 356 aa18.16■□□□□ 0.5
RUNX1-202ENST00000344691 CCDC181Q5TID7 509 aa18.16■□□□□ 0.5
RUNX1-202ENST00000344691 CDC45O75419 566 aa18.16■□□□□ 0.5
RUNX1-202ENST00000344691 NOB1Q9ULX3 412 aaKnown RBP18.16■□□□□ 0.5
RUNX1-202ENST00000344691 HSP90AB4PQ58FF6 505 aa18.15■□□□□ 0.5
RUNX1-202ENST00000344691 CCDC158Q5M9N0 1113 aa18.15■□□□□ 0.5
RUNX1-202ENST00000344691 MYO6Q9UM54 1294 aa18.15■□□□□ 0.5
RUNX1-202ENST00000344691 ZNF76P36508 570 aa18.15■□□□□ 0.5
RUNX1-202ENST00000344691 ME1P48163 572 aa18.15■□□□□ 0.5
RUNX1-202ENST00000344691 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
RUNX1-202ENST00000344691 PLCD3Q8N3E9 789 aa18.15■□□□□ 0.5
RUNX1-202ENST00000344691 UACAQ9BZF9 1416 aa18.15■□□□□ 0.5
RUNX1-202ENST00000344691 TSPY26PQ9H489 355 aa18.14■□□□□ 0.5
RUNX1-202ENST00000344691 CCDC30Q5VVM6 783 aa18.14■□□□□ 0.49
RUNX1-202ENST00000344691 CCDC39Q9UFE4 941 aa18.13■□□□□ 0.49
RUNX1-202ENST00000344691 SPDYE4A6NLX3 237 aa18.13■□□□□ 0.49
RUNX1-202ENST00000344691 MPHOSPH8Q99549 860 aa18.13■□□□□ 0.49
RUNX1-202ENST00000344691 TRAK2O60296 914 aa18.13■□□□□ 0.49
RUNX1-202ENST00000344691 DNA2P51530 1060 aa18.13■□□□□ 0.49
RUNX1-202ENST00000344691 BCAR3O75815 825 aa18.13■□□□□ 0.49
RUNX1-202ENST00000344691 WDR78Q5VTH9 848 aa18.13■□□□□ 0.49
RUNX1-202ENST00000344691 TXNDC2Q86VQ3 553 aa18.13■□□□□ 0.49
RUNX1-202ENST00000344691 LIG1P18858 919 aa18.12■□□□□ 0.49
RUNX1-202ENST00000344691 SLC4A2P04920 1241 aa18.11■□□□□ 0.49
RUNX1-202ENST00000344691 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
RUNX1-202ENST00000344691 ADAMTS8Q9UP79 889 aa18.11■□□□□ 0.49
RUNX1-202ENST00000344691 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
RUNX1-202ENST00000344691 PROSER2Q86WR7 435 aaPredicted RBP18.11■□□□□ 0.49
RUNX1-202ENST00000344691 MIS18AQ9NYP9 233 aa18.1■□□□□ 0.49
RUNX1-202ENST00000344691 ZBED9Q6R2W3 1325 aa18.1■□□□□ 0.49
RUNX1-202ENST00000344691 TDO2P48775 406 aa18.1■□□□□ 0.49
RUNX1-202ENST00000344691 ZNHIT6Q9NWK9 470 aaKnown RBP18.1■□□□□ 0.49
RUNX1-202ENST00000344691 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
RUNX1-202ENST00000344691 EXOSC9Q06265 439 aaKnown RBP18.1■□□□□ 0.49
RUNX1-202ENST00000344691 ERICH4A6NGS2 130 aa18.1■□□□□ 0.49
RUNX1-202ENST00000344691 TNNT1P13805 278 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms