RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.5■□□□□ 0.23
RNF13-201ENST00000344229 CPS1P31327 1500 aa16.5■□□□□ 0.23
RNF13-201ENST00000344229 PPIP5K1Q6PFW1 1433 aa16.5■□□□□ 0.23
RNF13-201ENST00000344229 CPSF1Q10570 1443 aaKnown RBP16.49■□□□□ 0.23
RNF13-201ENST00000344229 TECPR2O15040 1411 aa16.49■□□□□ 0.23
RNF13-201ENST00000344229 MON2Q7Z3U7 1717 aa16.49■□□□□ 0.23
RNF13-201ENST00000344229 AKAP12Q02952 1782 aa16.49■□□□□ 0.23
RNF13-201ENST00000344229 PDE4AP27815 886 aa16.48■□□□□ 0.23
RNF13-201ENST00000344229 CEBPAP49715 358 aaPredicted RBP16.48■□□□□ 0.23
RNF13-201ENST00000344229 RARSP54136 660 aaKnown RBP16.48■□□□□ 0.23
RNF13-201ENST00000344229 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
RNF13-201ENST00000344229 ADAMTS13Q76LX8 1427 aa16.48■□□□□ 0.23
RNF13-201ENST00000344229 FAM135BQ49AJ0 1406 aa16.48■□□□□ 0.23
RNF13-201ENST00000344229 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.47■□□□□ 0.23
RNF13-201ENST00000344229 MS4A1P11836 297 aa16.47■□□□□ 0.23
RNF13-201ENST00000344229 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
RNF13-201ENST00000344229 C3P01024 1663 aa16.47■□□□□ 0.23
RNF13-201ENST00000344229 LTKP29376 864 aa16.47■□□□□ 0.23
RNF13-201ENST00000344229 TMPOP42166 694 aaKnown RBP16.47■□□□□ 0.23
RNF13-201ENST00000344229 CENPQQ7L2Z9 268 aaPredicted RBP16.47■□□□□ 0.23
RNF13-201ENST00000344229 PANK1Q8TE04 598 aa16.47■□□□□ 0.23
RNF13-201ENST00000344229 POLKQ9UBT6 870 aa16.47■□□□□ 0.23
RNF13-201ENST00000344229 ZRANB1Q9UGI0 708 aa16.47■□□□□ 0.23
RNF13-201ENST00000344229 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
RNF13-201ENST00000344229 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
RNF13-201ENST00000344229 NUDT16Q96DE0 195 aaKnown RBP16.46■□□□□ 0.23
RNF13-201ENST00000344229 BACH2Q9BYV9 841 aa16.46■□□□□ 0.23
RNF13-201ENST00000344229 CDC42BPGQ6DT37 1551 aa16.46■□□□□ 0.23
RNF13-201ENST00000344229 ITSN1Q15811 1721 aa16.46■□□□□ 0.23
RNF13-201ENST00000344229 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
RNF13-201ENST00000344229 SIRT1Q96EB6 747 aa16.46■□□□□ 0.23
RNF13-201ENST00000344229 ROBO2Q9HCK4 1378 aa16.46■□□□□ 0.23
RNF13-201ENST00000344229 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
RNF13-201ENST00000344229 PDE3AQ14432 1141 aa16.45■□□□□ 0.22
RNF13-201ENST00000344229 NME9Q86XW9 330 aa16.45■□□□□ 0.22
RNF13-201ENST00000344229 EDC4Q6P2E9 1401 aaKnown RBP16.44■□□□□ 0.22
RNF13-201ENST00000344229 LRRC7Q96NW7 1537 aa16.44■□□□□ 0.22
RNF13-201ENST00000344229 FRAT1Q92837 279 aaPredicted RBP16.44■□□□□ 0.22
RNF13-201ENST00000344229 TSR2Q969E8 191 aaKnown RBP16.44■□□□□ 0.22
RNF13-201ENST00000344229 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
RNF13-201ENST00000344229 PRR36Q9H6K5 1346 aa16.44■□□□□ 0.22
RNF13-201ENST00000344229 COG6Q9Y2V7 657 aa16.44■□□□□ 0.22
RNF13-201ENST00000344229 PPM1GO15355 546 aaPredicted RBP16.43■□□□□ 0.22
RNF13-201ENST00000344229 RLBP1P12271 317 aa16.42■□□□□ 0.22
RNF13-201ENST00000344229 MYH16Q9H6N6 1097 aa16.42■□□□□ 0.22
RNF13-201ENST00000344229 FER1L4A9Z1Z3 1794 aa16.42■□□□□ 0.22
RNF13-201ENST00000344229 PAK3O75914 559 aaPredicted RBP16.42■□□□□ 0.22
RNF13-201ENST00000344229 IGHDP01880 384 aa16.42■□□□□ 0.22
RNF13-201ENST00000344229 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
RNF13-201ENST00000344229 NBR1Q14596 966 aa16.42■□□□□ 0.22
RNF13-201ENST00000344229 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
RNF13-201ENST00000344229 MAPK8IP3Q9UPT6 1336 aa16.42■□□□□ 0.22
RNF13-201ENST00000344229 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
RNF13-201ENST00000344229 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
RNF13-201ENST00000344229 PLEKHG1Q9ULL1 1385 aa16.41■□□□□ 0.22
RNF13-201ENST00000344229 RIPK4P57078 832 aa16.4■□□□□ 0.22
RNF13-201ENST00000344229 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
RNF13-201ENST00000344229 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
RNF13-201ENST00000344229 RSPH6AQ9H0K4 717 aa16.4■□□□□ 0.22
RNF13-201ENST00000344229 ANP32AP39687 249 aaKnown RBP16.4■□□□□ 0.22
RNF13-201ENST00000344229 PLPPR3Q6T4P5 718 aa16.4■□□□□ 0.22
RNF13-201ENST00000344229 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
RNF13-201ENST00000344229 EXOSC9Q06265 439 aaKnown RBP16.39■□□□□ 0.21
RNF13-201ENST00000344229 FCHSD2O94868 740 aa16.38■□□□□ 0.21
RNF13-201ENST00000344229 SLC26A8Q96RN1 970 aa16.38■□□□□ 0.21
RNF13-201ENST00000344229 NRKQ7Z2Y5 1582 aa16.38■□□□□ 0.21
RNF13-201ENST00000344229 DLG5Q8TDM6 1919 aa16.38■□□□□ 0.21
RNF13-201ENST00000344229 NPM2Q86SE8 214 aaKnown RBP16.38■□□□□ 0.21
RNF13-201ENST00000344229 CLUAP1Q96AJ1 413 aa16.38■□□□□ 0.21
RNF13-201ENST00000344229 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
RNF13-201ENST00000344229 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
RNF13-201ENST00000344229 HMOX1P09601 288 aa16.37■□□□□ 0.21
RNF13-201ENST00000344229 IL13P35225 146 aa16.37■□□□□ 0.21
RNF13-201ENST00000344229 PHACTR3Q96KR7 559 aa16.37■□□□□ 0.21
RNF13-201ENST00000344229 RGPD8O14715 1765 aaPredicted RBP16.36■□□□□ 0.21
RNF13-201ENST00000344229 CDK12Q9NYV4 1490 aaPredicted RBP16.36■□□□□ 0.21
RNF13-201ENST00000344229 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
RNF13-201ENST00000344229 SLIT1O75093 1534 aa16.36■□□□□ 0.21
RNF13-201ENST00000344229 AATKQ6ZMQ8 1374 aa16.36■□□□□ 0.21
RNF13-201ENST00000344229 NUTM2FA1L443 756 aa16.36■□□□□ 0.21
RNF13-201ENST00000344229 ARHGAP23Q9P227 1491 aa16.35■□□□□ 0.21
RNF13-201ENST00000344229 IL16Q14005 1332 aa16.35■□□□□ 0.21
RNF13-201ENST00000344229 PNNQ9H307 717 aaKnown RBP16.35■□□□□ 0.21
RNF13-201ENST00000344229 RGS3P49796 1198 aa16.34■□□□□ 0.21
RNF13-201ENST00000344229 COG3Q96JB2 828 aa16.34■□□□□ 0.21
RNF13-201ENST00000344229 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
RNF13-201ENST00000344229 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.21
RNF13-201ENST00000344229 C8orf34Q49A92 452 aa16.32■□□□□ 0.2
RNF13-201ENST00000344229 SSH1Q8WYL5 1049 aa16.32■□□□□ 0.2
RNF13-201ENST00000344229 ACEP12821 1306 aa16.32■□□□□ 0.2
RNF13-201ENST00000344229 CT47B1P0C2W7 299 aaPredicted RBP16.32■□□□□ 0.2
RNF13-201ENST00000344229 AMOTL2Q9Y2J4 779 aa16.32■□□□□ 0.2
RNF13-201ENST00000344229 EID1Q9Y6B2 187 aa16.32■□□□□ 0.2
RNF13-201ENST00000344229 VIRMAQ69YN4 1812 aaKnown RBP16.31■□□□□ 0.2
RNF13-201ENST00000344229 NALCNQ8IZF0 1738 aa16.31■□□□□ 0.2
RNF13-201ENST00000344229 ZKSCAN2Q63HK3 967 aa16.31■□□□□ 0.2
RNF13-201ENST00000344229 THUMPD2Q9BTF0 503 aaKnown RBP16.31■□□□□ 0.2
RNF13-201ENST00000344229 TTC21BQ7Z4L5 1316 aa16.31■□□□□ 0.2
RNF13-201ENST00000344229 SMC4Q9NTJ3 1288 aa16.3■□□□□ 0.2
RNF13-201ENST00000344229 PEAK1Q9H792 1746 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms