RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 SYNE3Q6ZMZ3 975 aa24.38■■□□□ 1.49
SOX12-201ENST00000342665 CNTROBQ8N137 903 aa24.38■■□□□ 1.49
SOX12-201ENST00000342665 ATF3P18847 181 aa24.37■■□□□ 1.49
SOX12-201ENST00000342665 CHD1LQ86WJ1 897 aa24.37■■□□□ 1.49
SOX12-201ENST00000342665 CPLX1O14810 134 aa24.36■■□□□ 1.49
SOX12-201ENST00000342665 TMX4Q9H1E5 349 aaPredicted RBP24.36■■□□□ 1.49
SOX12-201ENST00000342665 UGGT2Q9NYU1 1516 aa24.36■■□□□ 1.49
SOX12-201ENST00000342665 C20orf194Q5TEA3 1177 aa24.36■■□□□ 1.49
SOX12-201ENST00000342665 HDGFL1Q5TGJ6 251 aa24.36■■□□□ 1.49
SOX12-201ENST00000342665 RARSP54136 660 aaKnown RBP24.36■■□□□ 1.49
SOX12-201ENST00000342665 AKAP17AQ02040 695 aaKnown RBP24.34■■□□□ 1.49
SOX12-201ENST00000342665 BICD2Q8TD16 824 aa24.34■■□□□ 1.49
SOX12-201ENST00000342665 TRDNQ13061 729 aa24.34■■□□□ 1.49
SOX12-201ENST00000342665 DUSP27Q5VZP5 1158 aa24.33■■□□□ 1.49
SOX12-201ENST00000342665 SCAF11Q99590 1463 aaKnown RBP24.33■■□□□ 1.49
SOX12-201ENST00000342665 RRS1Q15050 365 aaKnown RBP24.33■■□□□ 1.48
SOX12-201ENST00000342665 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.32■■□□□ 1.48
SOX12-201ENST00000342665 HSP90AA2PQ14568 343 aaPredicted RBP24.32■■□□□ 1.48
SOX12-201ENST00000342665 ADGRL1O94910 1474 aa24.32■■□□□ 1.48
SOX12-201ENST00000342665 ESCO1Q5FWF5 840 aa24.32■■□□□ 1.48
SOX12-201ENST00000342665 TMEM57Q8N5G2 664 aa24.32■■□□□ 1.48
SOX12-201ENST00000342665 NKTRP30414 1462 aaKnown RBP24.32■■□□□ 1.48
SOX12-201ENST00000342665 CD109Q6YHK3 1445 aa24.32■■□□□ 1.48
SOX12-201ENST00000342665 APPP05067 770 aa24.31■■□□□ 1.48
SOX12-201ENST00000342665 NUDT16Q96DE0 195 aaKnown RBP24.31■■□□□ 1.48
SOX12-201ENST00000342665 ABCC11Q96J66 1382 aa24.31■■□□□ 1.48
SOX12-201ENST00000342665 SLC26A8Q96RN1 970 aa24.31■■□□□ 1.48
SOX12-201ENST00000342665 NEUROD6Q96NK8 337 aa24.31■■□□□ 1.48
SOX12-201ENST00000342665 RPAP2Q8IXW5 612 aaPredicted RBP24.3■■□□□ 1.48
SOX12-201ENST00000342665 MBD3O95983 291 aa24.3■■□□□ 1.48
SOX12-201ENST00000342665 PSMA5P28066 241 aa24.3■■□□□ 1.48
SOX12-201ENST00000342665 TRIM29Q14134 588 aa24.29■■□□□ 1.48
SOX12-201ENST00000342665 SSH1Q8WYL5 1049 aa24.29■■□□□ 1.48
SOX12-201ENST00000342665 NASPP49321 788 aaPredicted RBP24.28■■□□□ 1.48
SOX12-201ENST00000342665 FSD1Q9BTV5 496 aa24.28■■□□□ 1.48
SOX12-201ENST00000342665 DISP3Q9P2K9 1392 aa24.28■■□□□ 1.48
SOX12-201ENST00000342665 LRRCC1Q9C099 1032 aa24.28■■□□□ 1.48
SOX12-201ENST00000342665 SRCIN1Q9C0H9 1055 aa24.28■■□□□ 1.48
SOX12-201ENST00000342665 FAM43AQ8N2R8 423 aa24.27■■□□□ 1.48
SOX12-201ENST00000342665 ERC1Q8IUD2 1116 aa24.27■■□□□ 1.48
SOX12-201ENST00000342665 IDI1Q13907 227 aa24.27■■□□□ 1.47
SOX12-201ENST00000342665 CREBRFQ8IUR6 639 aa24.26■■□□□ 1.47
SOX12-201ENST00000342665 LRPPRCP42704 1394 aaKnown RBP24.26■■□□□ 1.47
SOX12-201ENST00000342665 CWC22Q9HCG8 908 aaKnown RBP24.26■■□□□ 1.47
SOX12-201ENST00000342665 K7ELQ4 463 aaPredicted RBP24.25■■□□□ 1.47
SOX12-201ENST00000342665 ALDH1L2Q3SY69 923 aa24.25■■□□□ 1.47
SOX12-201ENST00000342665 HIP1O00291 1037 aa24.25■■□□□ 1.47
SOX12-201ENST00000342665 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
SOX12-201ENST00000342665 SYTL4Q96C24 671 aaPredicted RBP24.25■■□□□ 1.47
SOX12-201ENST00000342665 C14orf93Q9H972 538 aaKnown RBP24.24■■□□□ 1.47
SOX12-201ENST00000342665 CAVIN1Q6NZI2 390 aaKnown RBP24.24■■□□□ 1.47
SOX12-201ENST00000342665 ZNF530Q6P9A1 599 aaPredicted RBP24.24■■□□□ 1.47
SOX12-201ENST00000342665 THUMPD2Q9BTF0 503 aaKnown RBP24.23■■□□□ 1.47
SOX12-201ENST00000342665 CIZ1Q9ULV3 898 aaPredicted RBP24.23■■□□□ 1.47
SOX12-201ENST00000342665 MSH5O43196 834 aa24.23■■□□□ 1.47
SOX12-201ENST00000342665 RALYLQ86SE5 291 aaKnown RBP24.23■■□□□ 1.47
SOX12-201ENST00000342665 SASS6Q6UVJ0 657 aa24.23■■□□□ 1.47
SOX12-201ENST00000342665 CCDC73Q6ZRK6 1079 aa24.23■■□□□ 1.47
SOX12-201ENST00000342665 NUP153P49790 1475 aaKnown RBP24.23■■□□□ 1.47
SOX12-201ENST00000342665 RALGAPBQ86X10 1494 aa24.23■■□□□ 1.47
SOX12-201ENST00000342665 G3V3G9 751 aa24.22■■□□□ 1.47
SOX12-201ENST00000342665 PDCP20941 246 aa24.22■■□□□ 1.47
SOX12-201ENST00000342665 DCAF8Q5TAQ9 597 aa24.22■■□□□ 1.47
SOX12-201ENST00000342665 DHX29Q7Z478 1369 aaKnown RBP24.22■■□□□ 1.47
SOX12-201ENST00000342665 PROSER2Q86WR7 435 aaPredicted RBP24.22■■□□□ 1.47
SOX12-201ENST00000342665 TPM3P06753 285 aa24.22■■□□□ 1.47
SOX12-201ENST00000342665 ATP10BO94823 1461 aa24.22■■□□□ 1.47
SOX12-201ENST00000342665 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.21■■□□□ 1.47
SOX12-201ENST00000342665 TPD52L1Q16890 204 aaPredicted RBP24.21■■□□□ 1.47
SOX12-201ENST00000342665 PRPF40AO75400 957 aaKnown RBP24.21■■□□□ 1.47
SOX12-201ENST00000342665 IFT57Q9NWB7 429 aa24.21■■□□□ 1.47
SOX12-201ENST00000342665 WASHC4Q2M389 1173 aa24.2■■□□□ 1.47
SOX12-201ENST00000342665 FAM135AQ9P2D6 1515 aa24.2■■□□□ 1.46
SOX12-201ENST00000342665 SKAP1Q86WV1 359 aa24.2■■□□□ 1.46
SOX12-201ENST00000342665 TCOF1Q13428 1488 aaKnown RBP24.19■■□□□ 1.46
SOX12-201ENST00000342665 MCM4P33991 863 aa24.19■■□□□ 1.46
SOX12-201ENST00000342665 BRPF3Q9ULD4 1205 aa24.19■■□□□ 1.46
SOX12-201ENST00000342665 NSD2O96028 1365 aa24.19■■□□□ 1.46
SOX12-201ENST00000342665 NOS1P29475 1434 aa24.19■■□□□ 1.46
SOX12-201ENST00000342665 RAPGEF6Q8TEU7 1601 aa24.19■■□□□ 1.46
SOX12-201ENST00000342665 TATP17735 454 aaPredicted RBP24.18■■□□□ 1.46
SOX12-201ENST00000342665 RNF214Q8ND24 703 aa24.18■■□□□ 1.46
SOX12-201ENST00000342665 MARCH6O60337 910 aa24.18■■□□□ 1.46
SOX12-201ENST00000342665 CLSTN1O94985 981 aa24.18■■□□□ 1.46
SOX12-201ENST00000342665 NFXL1Q6ZNB6 911 aa24.18■■□□□ 1.46
SOX12-201ENST00000342665 FANCAO15360 1455 aa24.17■■□□□ 1.46
SOX12-201ENST00000342665 AMER1Q5JTC6 1135 aaPredicted RBP24.16■■□□□ 1.46
SOX12-201ENST00000342665 VPS37DQ86XT2 251 aa24.16■■□□□ 1.46
SOX12-201ENST00000342665 TPM1P09493 284 aa24.15■■□□□ 1.46
SOX12-201ENST00000342665 HOOK1Q9UJC3 728 aaKnown RBP24.15■■□□□ 1.46
SOX12-201ENST00000342665 NME9Q86XW9 330 aa24.15■■□□□ 1.46
SOX12-201ENST00000342665 PES1O00541 588 aaKnown RBP24.15■■□□□ 1.46
SOX12-201ENST00000342665 SRGAP3O43295 1099 aa24.15■■□□□ 1.46
SOX12-201ENST00000342665 TSR1Q2NL82 804 aaKnown RBP24.15■■□□□ 1.46
SOX12-201ENST00000342665 ERICH2A1L162 156 aa24.14■■□□□ 1.46
SOX12-201ENST00000342665 LETM1O95202 739 aaPredicted RBP24.14■■□□□ 1.46
SOX12-201ENST00000342665 SAFBQ15424 915 aaKnown RBP eCLIP24.14■■□□□ 1.45
SOX12-201ENST00000342665 ANKLE2Q86XL3 938 aa24.14■■□□□ 1.45
SOX12-201ENST00000342665 AMOTL1Q8IY63 956 aa24.13■■□□□ 1.45
SOX12-201ENST00000342665 TRIM27P14373 513 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms