RNA–Protein interactions for RNA: ENST00000339697.4

SERINC1-201, Transcript of serine incorporator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERINC1, Length 3,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERINC1-201ENST00000339697 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
SERINC1-201ENST00000339697 USP31Q70CQ4 1352 aa13.52□□□□□ -0.25
SERINC1-201ENST00000339697 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.25
SERINC1-201ENST00000339697 SLC12A5Q9H2X9 1139 aa13.52□□□□□ -0.25
SERINC1-201ENST00000339697 KIF1AQ12756 1690 aa13.52□□□□□ -0.25
SERINC1-201ENST00000339697 DLG5Q8TDM6 1919 aa13.51□□□□□ -0.25
SERINC1-201ENST00000339697 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
SERINC1-201ENST00000339697 PPIP5K1Q6PFW1 1433 aa13.51□□□□□ -0.25
SERINC1-201ENST00000339697 WASLO00401 505 aaPredicted RBP13.5□□□□□ -0.25
SERINC1-201ENST00000339697 LTKP29376 864 aa13.5□□□□□ -0.25
SERINC1-201ENST00000339697 ADAMTS8Q9UP79 889 aa13.5□□□□□ -0.25
SERINC1-201ENST00000339697 PLEKHG3A1L390 1219 aa13.49□□□□□ -0.25
SERINC1-201ENST00000339697 CRYBG1Q9Y4K1 1723 aa13.49□□□□□ -0.25
SERINC1-201ENST00000339697 CDK19Q9BWU1 502 aa13.49□□□□□ -0.25
SERINC1-201ENST00000339697 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
SERINC1-201ENST00000339697 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
SERINC1-201ENST00000339697 NUTM2DQ5VT03 806 aaPredicted RBP13.48□□□□□ -0.25
SERINC1-201ENST00000339697 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
SERINC1-201ENST00000339697 USP6P35125 1406 aa13.47□□□□□ -0.25
SERINC1-201ENST00000339697 STRCP1A6NGW2 1772 aa13.47□□□□□ -0.25
SERINC1-201ENST00000339697 FYB1O15117 783 aa13.46□□□□□ -0.25
SERINC1-201ENST00000339697 N4BP2Q86UW6 1770 aaPredicted RBP13.46□□□□□ -0.25
SERINC1-201ENST00000339697 XIRP1Q702N8 1843 aaKnown RBP13.46□□□□□ -0.25
SERINC1-201ENST00000339697 NCOA3Q9Y6Q9 1424 aa13.46□□□□□ -0.25
SERINC1-201ENST00000339697 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.26
SERINC1-201ENST00000339697 CABP2Q9NPB3 220 aa13.46□□□□□ -0.26
SERINC1-201ENST00000339697 THEMISQ8N1K5 641 aaPredicted RBP13.45□□□□□ -0.26
SERINC1-201ENST00000339697 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
SERINC1-201ENST00000339697 DUSP27Q5VZP5 1158 aa13.45□□□□□ -0.26
SERINC1-201ENST00000339697 ALS2Q96Q42 1657 aa13.45□□□□□ -0.26
SERINC1-201ENST00000339697 ABCC6O95255 1503 aa13.45□□□□□ -0.26
SERINC1-201ENST00000339697 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
SERINC1-201ENST00000339697 LMO7Q8WWI1 1683 aa13.44□□□□□ -0.26
SERINC1-201ENST00000339697 SLFN5Q08AF3 891 aa13.44□□□□□ -0.26
SERINC1-201ENST00000339697 ESF1Q9H501 851 aaKnown RBP13.44□□□□□ -0.26
SERINC1-201ENST00000339697 PPP4R2Q9NY27 417 aa13.43□□□□□ -0.26
SERINC1-201ENST00000339697 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
SERINC1-201ENST00000339697 VIRMAQ69YN4 1812 aaKnown RBP13.43□□□□□ -0.26
SERINC1-201ENST00000339697 SLIT3O75094 1523 aa13.43□□□□□ -0.26
SERINC1-201ENST00000339697 GLIPR1L2Q4G1C9 344 aa13.42□□□□□ -0.26
SERINC1-201ENST00000339697 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
SERINC1-201ENST00000339697 LTN1O94822 1766 aa13.42□□□□□ -0.26
SERINC1-201ENST00000339697 ADAMTS7Q9UKP4 1686 aa13.42□□□□□ -0.26
SERINC1-201ENST00000339697 NFAT5O94916 1531 aa13.42□□□□□ -0.26
SERINC1-201ENST00000339697 ADGRL3Q9HAR2 1447 aa13.41□□□□□ -0.26
SERINC1-201ENST00000339697 MORC1Q86VD1 984 aa13.41□□□□□ -0.26
SERINC1-201ENST00000339697 WDR63Q8IWG1 891 aa13.41□□□□□ -0.26
SERINC1-201ENST00000339697 NCAPD2Q15021 1401 aa13.4□□□□□ -0.26
SERINC1-201ENST00000339697 IL16Q14005 1332 aa13.4□□□□□ -0.26
SERINC1-201ENST00000339697 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
SERINC1-201ENST00000339697 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
SERINC1-201ENST00000339697 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
SERINC1-201ENST00000339697 RRP1P56182 461 aaKnown RBP13.39□□□□□ -0.27
SERINC1-201ENST00000339697 RUNDC1Q96C34 613 aa13.39□□□□□ -0.27
SERINC1-201ENST00000339697 POGKQ9P215 609 aa13.39□□□□□ -0.27
SERINC1-201ENST00000339697 DCCP43146 1447 aa13.39□□□□□ -0.27
SERINC1-201ENST00000339697 STRCQ7RTU9 1775 aa13.39□□□□□ -0.27
SERINC1-201ENST00000339697 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
SERINC1-201ENST00000339697 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
SERINC1-201ENST00000339697 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
SERINC1-201ENST00000339697 WAPLQ7Z5K2 1190 aa13.39□□□□□ -0.27
SERINC1-201ENST00000339697 MLECQ14165 292 aa13.38□□□□□ -0.27
SERINC1-201ENST00000339697 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
SERINC1-201ENST00000339697 EID1Q9Y6B2 187 aa13.38□□□□□ -0.27
SERINC1-201ENST00000339697 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
SERINC1-201ENST00000339697 NPHP4O75161 1426 aaPredicted RBP13.38□□□□□ -0.27
SERINC1-201ENST00000339697 NUDT16Q96DE0 195 aaKnown RBP13.37□□□□□ -0.27
SERINC1-201ENST00000339697 CABP1Q9NZU7 370 aa13.37□□□□□ -0.27
SERINC1-201ENST00000339697 FAM208AQ9UK61 1670 aaKnown RBP13.37□□□□□ -0.27
SERINC1-201ENST00000339697 E9PSI1 815 aa13.37□□□□□ -0.27
SERINC1-201ENST00000339697 MTHFSP49914 203 aa13.36□□□□□ -0.27
SERINC1-201ENST00000339697 TXNDC2Q86VQ3 553 aa13.36□□□□□ -0.27
SERINC1-201ENST00000339697 ZMYND15Q9H091 742 aa13.36□□□□□ -0.27
SERINC1-201ENST00000339697 RCAN3Q9UKA8 241 aa13.36□□□□□ -0.27
SERINC1-201ENST00000339697 PLEKHG2Q9H7P9 1386 aa13.36□□□□□ -0.27
SERINC1-201ENST00000339697 CT47B1P0C2W7 299 aaPredicted RBP13.36□□□□□ -0.27
SERINC1-201ENST00000339697 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
SERINC1-201ENST00000339697 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
SERINC1-201ENST00000339697 STK26Q9P289 416 aa13.35□□□□□ -0.27
SERINC1-201ENST00000339697 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
SERINC1-201ENST00000339697 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
SERINC1-201ENST00000339697 CFAP53Q96M91 514 aa13.34□□□□□ -0.27
SERINC1-201ENST00000339697 SIPA1L3O60292 1781 aaPredicted RBP13.33□□□□□ -0.27
SERINC1-201ENST00000339697 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.27
SERINC1-201ENST00000339697 KDRP35968 1356 aa13.33□□□□□ -0.28
SERINC1-201ENST00000339697 CEBPAP49715 358 aaPredicted RBP13.33□□□□□ -0.28
SERINC1-201ENST00000339697 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
SERINC1-201ENST00000339697 RTL1A6NKG5 1358 aa13.33□□□□□ -0.28
SERINC1-201ENST00000339697 COL18A1P39060 1754 aa13.33□□□□□ -0.28
SERINC1-201ENST00000339697 BRPF1P55201 1214 aaPredicted RBP13.32□□□□□ -0.28
SERINC1-201ENST00000339697 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
SERINC1-201ENST00000339697 IL13P35225 146 aa13.31□□□□□ -0.28
SERINC1-201ENST00000339697 SAFB2Q14151 953 aaKnown RBP eCLIP13.31□□□□□ -0.28
SERINC1-201ENST00000339697 AMOTL2Q9Y2J4 779 aa13.31□□□□□ -0.28
SERINC1-201ENST00000339697 FCHSD2O94868 740 aa13.31□□□□□ -0.28
SERINC1-201ENST00000339697 B4GALNT3Q6L9W6 998 aa13.31□□□□□ -0.28
SERINC1-201ENST00000339697 ARHGEF10O15013 1369 aa13.31□□□□□ -0.28
SERINC1-201ENST00000339697 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
SERINC1-201ENST00000339697 RSPH6AQ9H0K4 717 aa13.3□□□□□ -0.28
SERINC1-201ENST00000339697 AAMPQ13685 434 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms