RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PTPRMP28827 1452 aa17.77■□□□□ 0.44
SF1-202ENST00000334944 TXNDC2Q86VQ3 553 aa17.75■□□□□ 0.43
SF1-202ENST00000334944 ABCC11Q96J66 1382 aa17.75■□□□□ 0.43
SF1-202ENST00000334944 RIMBP3CA6NJZ7 1639 aa17.75■□□□□ 0.43
SF1-202ENST00000334944 RIMBP3BA6NNM3 1639 aa17.75■□□□□ 0.43
SF1-202ENST00000334944 RIMBP3Q9UFD9 1639 aa17.75■□□□□ 0.43
SF1-202ENST00000334944 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
SF1-202ENST00000334944 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
SF1-202ENST00000334944 NUTM2FA1L443 756 aa17.73■□□□□ 0.43
SF1-202ENST00000334944 ZFYVE9O95405 1425 aa17.73■□□□□ 0.43
SF1-202ENST00000334944 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
SF1-202ENST00000334944 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
SF1-202ENST00000334944 IQSEC2Q5JU85 1478 aa17.72■□□□□ 0.43
SF1-202ENST00000334944 HSP90AA1P07900 732 aaKnown RBP17.72■□□□□ 0.43
SF1-202ENST00000334944 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
SF1-202ENST00000334944 ALKQ9UM73 1620 aa17.72■□□□□ 0.43
SF1-202ENST00000334944 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
SF1-202ENST00000334944 PUS7Q96PZ0 661 aaKnown RBP17.72■□□□□ 0.43
SF1-202ENST00000334944 SLKQ9H2G2 1235 aaPredicted RBP17.72■□□□□ 0.43
SF1-202ENST00000334944 PNNQ9H307 717 aaKnown RBP17.72■□□□□ 0.43
SF1-202ENST00000334944 ATAD2Q6PL18 1390 aa17.72■□□□□ 0.43
SF1-202ENST00000334944 WDR63Q8IWG1 891 aa17.71■□□□□ 0.43
SF1-202ENST00000334944 CD163L1Q9NR16 1453 aa17.71■□□□□ 0.43
SF1-202ENST00000334944 DIP2BQ9P265 1576 aa17.71■□□□□ 0.43
SF1-202ENST00000334944 HMOX1P09601 288 aa17.71■□□□□ 0.43
SF1-202ENST00000334944 TMPOP42166 694 aaKnown RBP17.71■□□□□ 0.43
SF1-202ENST00000334944 EXOSC9Q06265 439 aaKnown RBP17.71■□□□□ 0.43
SF1-202ENST00000334944 C8orf34Q49A92 452 aa17.71■□□□□ 0.43
SF1-202ENST00000334944 PDE3AQ14432 1141 aa17.7■□□□□ 0.42
SF1-202ENST00000334944 PCDHB15Q9Y5E8 787 aa17.7■□□□□ 0.42
SF1-202ENST00000334944 RIPK4P57078 832 aa17.7■□□□□ 0.42
SF1-202ENST00000334944 PLEKHF1Q96S99 279 aa17.7■□□□□ 0.42
SF1-202ENST00000334944 NSD2O96028 1365 aa17.69■□□□□ 0.42
SF1-202ENST00000334944 CLTCQ00610 1675 aaKnown RBP17.69■□□□□ 0.42
SF1-202ENST00000334944 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
SF1-202ENST00000334944 TRIM35Q9UPQ4 493 aa17.69■□□□□ 0.42
SF1-202ENST00000334944 RIMS2Q9UQ26 1411 aa17.69■□□□□ 0.42
SF1-202ENST00000334944 GZF1Q9H116 711 aaPredicted RBP17.69■□□□□ 0.42
SF1-202ENST00000334944 MYH16Q9H6N6 1097 aa17.69■□□□□ 0.42
SF1-202ENST00000334944 NME9Q86XW9 330 aa17.68■□□□□ 0.42
SF1-202ENST00000334944 THUMPD2Q9BTF0 503 aaKnown RBP17.68■□□□□ 0.42
SF1-202ENST00000334944 PANK2Q9BZ23 570 aa17.68■□□□□ 0.42
SF1-202ENST00000334944 A0A0U1RQG5 324 aaPredicted RBP17.68■□□□□ 0.42
SF1-202ENST00000334944 FAM161AQ3B820 660 aa17.68■□□□□ 0.42
SF1-202ENST00000334944 EMILIN1Q9Y6C2 1016 aa17.68■□□□□ 0.42
SF1-202ENST00000334944 METP08581 1390 aa17.67■□□□□ 0.42
SF1-202ENST00000334944 A2ML1A8K2U0 1454 aa17.67■□□□□ 0.42
SF1-202ENST00000334944 SMC4Q9NTJ3 1288 aa17.67■□□□□ 0.42
SF1-202ENST00000334944 USP32Q8NFA0 1604 aa17.66■□□□□ 0.42
SF1-202ENST00000334944 PRKAR2BP31323 418 aa17.66■□□□□ 0.42
SF1-202ENST00000334944 CCDC27Q2M243 656 aa17.65■□□□□ 0.42
SF1-202ENST00000334944 POLKQ9UBT6 870 aa17.65■□□□□ 0.42
SF1-202ENST00000334944 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
SF1-202ENST00000334944 RRS1Q15050 365 aaKnown RBP17.65■□□□□ 0.42
SF1-202ENST00000334944 FTSJ3Q8IY81 847 aaKnown RBP17.65■□□□□ 0.42
SF1-202ENST00000334944 NLRP1Q9C000 1473 aa17.64■□□□□ 0.41
SF1-202ENST00000334944 CEBPAP49715 358 aaPredicted RBP17.64■□□□□ 0.41
SF1-202ENST00000334944 SSH1Q8WYL5 1049 aa17.64■□□□□ 0.41
SF1-202ENST00000334944 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
SF1-202ENST00000334944 SOX12O15370 315 aa17.63■□□□□ 0.41
SF1-202ENST00000334944 NINLQ9Y2I6 1382 aa17.63■□□□□ 0.41
SF1-202ENST00000334944 SEC24BO95487 1268 aa17.63■□□□□ 0.41
SF1-202ENST00000334944 ZMYM3Q14202 1370 aa17.62■□□□□ 0.41
SF1-202ENST00000334944 ELL2O00472 640 aaPredicted RBP17.62■□□□□ 0.41
SF1-202ENST00000334944 WASLO00401 505 aaPredicted RBP17.61■□□□□ 0.41
SF1-202ENST00000334944 RRP9O43818 475 aaKnown RBP17.61■□□□□ 0.41
SF1-202ENST00000334944 COL3A1P02461 1466 aaPredicted RBP17.61■□□□□ 0.41
SF1-202ENST00000334944 ZKSCAN2Q63HK3 967 aa17.61■□□□□ 0.41
SF1-202ENST00000334944 ITPRIPQ8IWB1 547 aa17.61■□□□□ 0.41
SF1-202ENST00000334944 SPRYD3Q8NCJ5 442 aa17.61■□□□□ 0.41
SF1-202ENST00000334944 NUDT16Q96DE0 195 aaKnown RBP17.61■□□□□ 0.41
SF1-202ENST00000334944 XRCC6P12956 609 aaKnown RBP eCLIP17.6■□□□□ 0.411e-7■■■□□ 17.8
SF1-202ENST00000334944 TRIM27P14373 513 aa17.6■□□□□ 0.41
SF1-202ENST00000334944 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
SF1-202ENST00000334944 NOB1Q9ULX3 412 aaKnown RBP17.6■□□□□ 0.41
SF1-202ENST00000334944 PPIP5K1Q6PFW1 1433 aa17.58■□□□□ 0.41
SF1-202ENST00000334944 SLC26A8Q96RN1 970 aa17.58■□□□□ 0.41
SF1-202ENST00000334944 MVPQ14764 893 aaKnown RBP17.58■□□□□ 0.4
SF1-202ENST00000334944 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.4
SF1-202ENST00000334944 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
SF1-202ENST00000334944 FAM83GA6ND36 823 aa17.55■□□□□ 0.4
SF1-202ENST00000334944 DCTN1Q14203 1278 aa17.55■□□□□ 0.4
SF1-202ENST00000334944 L1TD1Q5T7N2 865 aaKnown RBP17.55■□□□□ 0.4
SF1-202ENST00000334944 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
SF1-202ENST00000334944 ADGRB2O60241 1585 aa17.54■□□□□ 0.4
SF1-202ENST00000334944 FCHSD2O94868 740 aa17.54■□□□□ 0.4
SF1-202ENST00000334944 TMEM57Q8N5G2 664 aa17.54■□□□□ 0.4
SF1-202ENST00000334944 SPATA31D1Q6ZQQ2 1576 aa17.54■□□□□ 0.4
SF1-202ENST00000334944 PRR36Q9H6K5 1346 aa17.54■□□□□ 0.4
SF1-202ENST00000334944 PMFBP1Q8TBY8 1022 aa17.54■□□□□ 0.4
SF1-202ENST00000334944 PNPLA6Q8IY17 1366 aa17.54■□□□□ 0.4
SF1-202ENST00000334944 TSPYL6Q8N831 410 aa17.53■□□□□ 0.4
SF1-202ENST00000334944 CCDC61Q9Y6R9 512 aa17.53■□□□□ 0.4
SF1-202ENST00000334944 AGLP35573 1532 aa17.53■□□□□ 0.4
SF1-202ENST00000334944 LTKP29376 864 aa17.53■□□□□ 0.4
SF1-202ENST00000334944 ATF7IPQ6VMQ6 1270 aa17.53■□□□□ 0.4
SF1-202ENST00000334944 COG3Q96JB2 828 aa17.53■□□□□ 0.4
SF1-202ENST00000334944 CLCN1P35523 988 aa17.53■□□□□ 0.4
SF1-202ENST00000334944 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.52■□□□□ 0.4
SF1-202ENST00000334944 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms