RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 HDGFL2Q7Z4V5 671 aaPredicted RBP22.25■■□□□ 1.15
PDCD1-201ENST00000334409 ADGRL3Q9HAR2 1447 aa22.25■■□□□ 1.15
PDCD1-201ENST00000334409 NINLQ9Y2I6 1382 aa22.24■■□□□ 1.15
PDCD1-201ENST00000334409 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
PDCD1-201ENST00000334409 NKTRP30414 1462 aaKnown RBP22.24■■□□□ 1.15
PDCD1-201ENST00000334409 USP32Q8NFA0 1604 aa22.24■■□□□ 1.15
PDCD1-201ENST00000334409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.24■■□□□ 1.15
PDCD1-201ENST00000334409 DMRT2Q9Y5R5 561 aa22.24■■□□□ 1.15
PDCD1-201ENST00000334409 NEFMP07197 916 aa22.23■■□□□ 1.15
PDCD1-201ENST00000334409 MYBBP1AQ9BQG0 1328 aaKnown RBP22.23■■□□□ 1.15
PDCD1-201ENST00000334409 ACEP12821 1306 aa22.21■■□□□ 1.15
PDCD1-201ENST00000334409 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
PDCD1-201ENST00000334409 TNNT2P45379 298 aaPredicted RBP22.2■■□□□ 1.14
PDCD1-201ENST00000334409 FMN2Q9NZ56 1722 aa22.2■■□□□ 1.14
PDCD1-201ENST00000334409 PARD3Q8TEW0 1356 aa22.19■■□□□ 1.14
PDCD1-201ENST00000334409 GGNBP2Q9H3C7 697 aa22.19■■□□□ 1.14
PDCD1-201ENST00000334409 CDC42BPGQ6DT37 1551 aa22.18■■□□□ 1.14
PDCD1-201ENST00000334409 CGNL1Q0VF96 1302 aa22.18■■□□□ 1.14
PDCD1-201ENST00000334409 ESCO1Q5FWF5 840 aa22.18■■□□□ 1.14
PDCD1-201ENST00000334409 NGDNQ8NEJ9 315 aaKnown RBP22.18■■□□□ 1.14
PDCD1-201ENST00000334409 PLEKHG3A1L390 1219 aa22.18■■□□□ 1.14
PDCD1-201ENST00000334409 CPSF1Q10570 1443 aaKnown RBP22.17■■□□□ 1.14
PDCD1-201ENST00000334409 ORAI2Q96SN7 254 aa22.17■■□□□ 1.14
PDCD1-201ENST00000334409 TOPAZ1Q8N9V7 1692 aa22.17■■□□□ 1.14
PDCD1-201ENST00000334409 TCERG1O14776 1098 aaKnown RBP22.16■■□□□ 1.14
PDCD1-201ENST00000334409 RSPH6AQ9H0K4 717 aa22.16■■□□□ 1.14
PDCD1-201ENST00000334409 ATF3P18847 181 aa22.16■■□□□ 1.14
PDCD1-201ENST00000334409 LRRC7Q96NW7 1537 aa22.16■■□□□ 1.14
PDCD1-201ENST00000334409 FYB1O15117 783 aa22.15■■□□□ 1.14
PDCD1-201ENST00000334409 MORC1Q86VD1 984 aa22.15■■□□□ 1.14
PDCD1-201ENST00000334409 ZRANB1Q9UGI0 708 aa22.15■■□□□ 1.14
PDCD1-201ENST00000334409 XIRP1Q702N8 1843 aaKnown RBP22.14■■□□□ 1.13
PDCD1-201ENST00000334409 ANKARQ7Z5J8 1434 aa22.13■■□□□ 1.13
PDCD1-201ENST00000334409 NME9Q86XW9 330 aa22.13■■□□□ 1.13
PDCD1-201ENST00000334409 PHF8Q9UPP1 1060 aa22.13■■□□□ 1.13
PDCD1-201ENST00000334409 ZNF692Q9BU19 519 aaPredicted RBP22.12■■□□□ 1.13
PDCD1-201ENST00000334409 NPC1L1Q9UHC9 1359 aa22.12■■□□□ 1.13
PDCD1-201ENST00000334409 ITSN1Q15811 1721 aa22.12■■□□□ 1.13
PDCD1-201ENST00000334409 MS4A1P11836 297 aa22.12■■□□□ 1.13
PDCD1-201ENST00000334409 PPP2R1AP30153 589 aa22.12■■□□□ 1.13
PDCD1-201ENST00000334409 GSE1Q14687 1217 aa22.11■■□□□ 1.13
PDCD1-201ENST00000334409 MSH6P52701 1360 aa22.11■■□□□ 1.13
PDCD1-201ENST00000334409 AKAP12Q02952 1782 aa22.11■■□□□ 1.13
PDCD1-201ENST00000334409 XPCQ01831 940 aaPredicted RBP22.1■■□□□ 1.13
PDCD1-201ENST00000334409 NLRP13Q86W25 1043 aa22.1■■□□□ 1.13
PDCD1-201ENST00000334409 FBLN1P23142 703 aa22.1■■□□□ 1.13
PDCD1-201ENST00000334409 DDRGK1Q96HY6 314 aa22.1■■□□□ 1.13
PDCD1-201ENST00000334409 EDC4Q6P2E9 1401 aaKnown RBP22.09■■□□□ 1.13
PDCD1-201ENST00000334409 FOXO3O43524 673 aa22.09■■□□□ 1.13
PDCD1-201ENST00000334409 INSRP06213 1382 aa22.08■■□□□ 1.13
PDCD1-201ENST00000334409 MON2Q7Z3U7 1717 aa22.08■■□□□ 1.13
PDCD1-201ENST00000334409 USP6P35125 1406 aa22.08■■□□□ 1.13
PDCD1-201ENST00000334409 TTC21BQ7Z4L5 1316 aa22.08■■□□□ 1.12
PDCD1-201ENST00000334409 POLR3AO14802 1390 aaPredicted RBP22.08■■□□□ 1.12
PDCD1-201ENST00000334409 NCOA3Q9Y6Q9 1424 aa22.07■■□□□ 1.12
PDCD1-201ENST00000334409 CADPS2Q86UW7 1296 aa22.07■■□□□ 1.12
PDCD1-201ENST00000334409 DDX17Q92841 729 aaKnown RBP22.07■■□□□ 1.12
PDCD1-201ENST00000334409 C1orf167Q5SNV9 1468 aa22.07■■□□□ 1.12
PDCD1-201ENST00000334409 MST1RQ04912 1400 aa22.06■■□□□ 1.12
PDCD1-201ENST00000334409 PSME1Q06323 249 aa22.06■■□□□ 1.12
PDCD1-201ENST00000334409 NUTM2GQ5VZR2 741 aa22.06■■□□□ 1.12
PDCD1-201ENST00000334409 PDE3BQ13370 1112 aa22.05■■□□□ 1.12
PDCD1-201ENST00000334409 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
PDCD1-201ENST00000334409 KIF20BQ96Q89 1820 aa22.04■■□□□ 1.12
PDCD1-201ENST00000334409 NSD2O96028 1365 aa22.03■■□□□ 1.12
PDCD1-201ENST00000334409 EIF5BO60841 1220 aaKnown RBP22.03■■□□□ 1.12
PDCD1-201ENST00000334409 PLEKHG5O94827 1062 aa22.03■■□□□ 1.12
PDCD1-201ENST00000334409 FAM43AQ8N2R8 423 aa22.03■■□□□ 1.12
PDCD1-201ENST00000334409 SOX12O15370 315 aa22.02■■□□□ 1.12
PDCD1-201ENST00000334409 DCCP43146 1447 aa22.02■■□□□ 1.11
PDCD1-201ENST00000334409 BRPF3Q9ULD4 1205 aa22.01■■□□□ 1.11
PDCD1-201ENST00000334409 SENP3-EIF4A1A0A087X0R7 540 aa22.01■■□□□ 1.11
PDCD1-201ENST00000334409 SSH2Q76I76 1423 aa22.01■■□□□ 1.11
PDCD1-201ENST00000334409 PDE4AP27815 886 aa22■■□□□ 1.11
PDCD1-201ENST00000334409 RRP1P56182 461 aaKnown RBP22■■□□□ 1.11
PDCD1-201ENST00000334409 GLIPR1L2Q4G1C9 344 aa22■■□□□ 1.11
PDCD1-201ENST00000334409 COG3Q96JB2 828 aa22■■□□□ 1.11
PDCD1-201ENST00000334409 BACH2Q9BYV9 841 aa22■■□□□ 1.11
PDCD1-201ENST00000334409 NRKQ7Z2Y5 1582 aa22■■□□□ 1.11
PDCD1-201ENST00000334409 MTHFSP49914 203 aa22■■□□□ 1.11
PDCD1-201ENST00000334409 SLAIN2Q9P270 581 aa22■■□□□ 1.11
PDCD1-201ENST00000334409 LTBP4Q8N2S1 1624 aa21.98■■□□□ 1.11
PDCD1-201ENST00000334409 ABTB2Q8N961 1025 aa21.98■■□□□ 1.11
PDCD1-201ENST00000334409 PKNOX2Q96KN3 472 aa21.98■■□□□ 1.11
PDCD1-201ENST00000334409 LMOD2Q6P5Q4 547 aa21.97■■□□□ 1.11
PDCD1-201ENST00000334409 NLRP6P59044 892 aa21.97■■□□□ 1.11
PDCD1-201ENST00000334409 KRT28Q7Z3Y7 464 aa21.97■■□□□ 1.11
PDCD1-201ENST00000334409 NPM2Q86SE8 214 aaKnown RBP21.97■■□□□ 1.11
PDCD1-201ENST00000334409 ANKRD26Q9UPS8 1709 aa21.96■■□□□ 1.11
PDCD1-201ENST00000334409 BRINP3Q76B58 766 aa21.96■■□□□ 1.11
PDCD1-201ENST00000334409 RCAN3Q9UKA8 241 aa21.96■■□□□ 1.11
PDCD1-201ENST00000334409 BLMP54132 1417 aaPredicted RBP21.96■■□□□ 1.11
PDCD1-201ENST00000334409 TTC21AQ8NDW8 1320 aa21.95■■□□□ 1.1
PDCD1-201ENST00000334409 RRS1Q15050 365 aaKnown RBP21.95■■□□□ 1.1
PDCD1-201ENST00000334409 EMILIN1Q9Y6C2 1016 aa21.92■■□□□ 1.1
PDCD1-201ENST00000334409 PIK3C2AO00443 1686 aa21.92■■□□□ 1.1
PDCD1-201ENST00000334409 POLKQ9UBT6 870 aa21.91■■□□□ 1.1
PDCD1-201ENST00000334409 OVOS2A0A0J9YW53 1432 aa21.9■■□□□ 1.1
PDCD1-201ENST00000334409 OVOS2Q6IE36 1432 aa21.9■■□□□ 1.1
PDCD1-201ENST00000334409 KIF1AQ12756 1690 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms