RNA–Protein interactions for RNA: ENST00000333175.9

TMEM259-201, Transcript of transmembrane protein 259, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM259, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-201ENST00000333175 ESF1Q9H501 851 aaKnown RBP28.5■■■□□ 2.15
TMEM259-201ENST00000333175 MYH16Q9H6N6 1097 aa28.49■■■□□ 2.15
TMEM259-201ENST00000333175 SETD1AO15047 1707 aaKnown RBP28.49■■■□□ 2.15
TMEM259-201ENST00000333175 MAPK8IP3Q9UPT6 1336 aa28.48■■■□□ 2.15
TMEM259-201ENST00000333175 TMPOP42166 694 aaKnown RBP28.48■■■□□ 2.15
TMEM259-201ENST00000333175 METP08581 1390 aa28.48■■■□□ 2.15
TMEM259-201ENST00000333175 TXNDC2Q86VQ3 553 aa28.48■■■□□ 2.15
TMEM259-201ENST00000333175 KIF20BQ96Q89 1820 aa28.46■■■□□ 2.15
TMEM259-201ENST00000333175 DIAPH1O60610 1272 aaKnown RBP28.46■■■□□ 2.15
TMEM259-201ENST00000333175 ZMYM3Q14202 1370 aa28.46■■■□□ 2.15
TMEM259-201ENST00000333175 TRIM35Q9UPQ4 493 aa28.46■■■□□ 2.15
TMEM259-201ENST00000333175 MED14O60244 1454 aa28.45■■■□□ 2.15
TMEM259-201ENST00000333175 KIF13AQ9H1H9 1805 aa28.45■■■□□ 2.14
TMEM259-201ENST00000333175 NCKAP5LQ9HCH0 1330 aa28.44■■■□□ 2.14
TMEM259-201ENST00000333175 C8orf34Q49A92 452 aa28.44■■■□□ 2.14
TMEM259-201ENST00000333175 NRXN3Q9Y4C0 1643 aa28.43■■■□□ 2.14
TMEM259-201ENST00000333175 DLC1Q96QB1 1528 aa28.43■■■□□ 2.14
TMEM259-201ENST00000333175 FAM161AQ3B820 660 aa28.42■■■□□ 2.14
TMEM259-201ENST00000333175 BCL11AQ9H165 835 aa28.42■■■□□ 2.14
TMEM259-201ENST00000333175 EXOSC9Q06265 439 aaKnown RBP28.41■■■□□ 2.14
TMEM259-201ENST00000333175 RIPK4P57078 832 aa28.41■■■□□ 2.14
TMEM259-201ENST00000333175 ZRANB1Q9UGI0 708 aa28.41■■■□□ 2.14
TMEM259-201ENST00000333175 WASLO00401 505 aaPredicted RBP28.39■■■□□ 2.13
TMEM259-201ENST00000333175 POLKQ9UBT6 870 aa28.39■■■□□ 2.13
TMEM259-201ENST00000333175 NME9Q86XW9 330 aa28.38■■■□□ 2.13
TMEM259-201ENST00000333175 PCDHB15Q9Y5E8 787 aa28.38■■■□□ 2.13
TMEM259-201ENST00000333175 PPIP5K1Q6PFW1 1433 aa28.38■■■□□ 2.13
TMEM259-201ENST00000333175 PNPLA6Q8IY17 1366 aa28.37■■■□□ 2.13
TMEM259-201ENST00000333175 LAS1LQ9Y4W2 734 aaKnown RBP28.37■■■□□ 2.13
TMEM259-201ENST00000333175 ATP7BP35670 1465 aa28.37■■■□□ 2.13
TMEM259-201ENST00000333175 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.36■■■□□ 2.13
TMEM259-201ENST00000333175 EMILIN1Q9Y6C2 1016 aa28.36■■■□□ 2.13
TMEM259-201ENST00000333175 SMC4Q9NTJ3 1288 aa28.35■■■□□ 2.13
TMEM259-201ENST00000333175 HMOX1P09601 288 aa28.35■■■□□ 2.13
TMEM259-201ENST00000333175 NCBP3Q53F19 620 aaKnown RBP28.35■■■□□ 2.13
TMEM259-201ENST00000333175 PRKAR2BP31323 418 aa28.34■■■□□ 2.13
TMEM259-201ENST00000333175 LRRC7Q96NW7 1537 aa28.33■■■□□ 2.13
TMEM259-201ENST00000333175 TNRQ92752 1358 aa28.33■■■□□ 2.13
TMEM259-201ENST00000333175 NUDT16Q96DE0 195 aaKnown RBP28.33■■■□□ 2.13
TMEM259-201ENST00000333175 MAP2P11137 1827 aaKnown RBP28.32■■■□□ 2.12
TMEM259-201ENST00000333175 SLC4A3P48751 1232 aa28.32■■■□□ 2.12
TMEM259-201ENST00000333175 FTSJ3Q8IY81 847 aaKnown RBP28.32■■■□□ 2.12
TMEM259-201ENST00000333175 ZKSCAN2Q63HK3 967 aa28.31■■■□□ 2.12
TMEM259-201ENST00000333175 SSH1Q8WYL5 1049 aa28.31■■■□□ 2.12
TMEM259-201ENST00000333175 RSPH6AQ9H0K4 717 aa28.3■■■□□ 2.12
TMEM259-201ENST00000333175 CPSF1Q10570 1443 aaKnown RBP28.29■■■□□ 2.12
TMEM259-201ENST00000333175 PLPPR3Q6T4P5 718 aa28.29■■■□□ 2.12
TMEM259-201ENST00000333175 MVPQ14764 893 aaKnown RBP28.28■■■□□ 2.12
TMEM259-201ENST00000333175 PHACTR3Q96KR7 559 aa28.28■■■□□ 2.12
TMEM259-201ENST00000333175 DZIP1LQ8IYY4 767 aaKnown RBP28.28■■■□□ 2.12
TMEM259-201ENST00000333175 EDC4Q6P2E9 1401 aaKnown RBP28.27■■■□□ 2.12
TMEM259-201ENST00000333175 FCHSD2O94868 740 aa28.27■■■□□ 2.12
TMEM259-201ENST00000333175 THUMPD2Q9BTF0 503 aaKnown RBP28.27■■■□□ 2.12
TMEM259-201ENST00000333175 NUTM2FA1L443 756 aa28.27■■■□□ 2.12
TMEM259-201ENST00000333175 RRS1Q15050 365 aaKnown RBP28.27■■■□□ 2.12
TMEM259-201ENST00000333175 TRIM27P14373 513 aa28.26■■■□□ 2.11
TMEM259-201ENST00000333175 PMFBP1Q8TBY8 1022 aa28.26■■■□□ 2.11
TMEM259-201ENST00000333175 DDRGK1Q96HY6 314 aa28.26■■■□□ 2.11
TMEM259-201ENST00000333175 CPS1P31327 1500 aa28.25■■■□□ 2.11
TMEM259-201ENST00000333175 PNNQ9H307 717 aaKnown RBP28.25■■■□□ 2.11
TMEM259-201ENST00000333175 TMEM2Q9UHN6 1383 aa28.25■■■□□ 2.11
TMEM259-201ENST00000333175 CEBPAP49715 358 aaPredicted RBP28.24■■■□□ 2.11
TMEM259-201ENST00000333175 CCDC61Q9Y6R9 512 aa28.24■■■□□ 2.11
TMEM259-201ENST00000333175 PRR36Q9H6K5 1346 aa28.24■■■□□ 2.11
TMEM259-201ENST00000333175 FAM135BQ49AJ0 1406 aa28.24■■■□□ 2.11
TMEM259-201ENST00000333175 ROBO2Q9HCK4 1378 aa28.24■■■□□ 2.11
TMEM259-201ENST00000333175 IL16Q14005 1332 aa28.24■■■□□ 2.11
TMEM259-201ENST00000333175 CT47B1P0C2W7 299 aaPredicted RBP28.23■■■□□ 2.11
TMEM259-201ENST00000333175 NOB1Q9ULX3 412 aaKnown RBP28.23■■■□□ 2.11
TMEM259-201ENST00000333175 HDGFP51858 240 aaKnown RBP28.22■■■□□ 2.11
TMEM259-201ENST00000333175 CDC42BPGQ6DT37 1551 aa28.22■■■□□ 2.11
TMEM259-201ENST00000333175 ITPRIPQ8IWB1 547 aa28.22■■■□□ 2.11
TMEM259-201ENST00000333175 NEFMP07197 916 aa28.21■■■□□ 2.11
TMEM259-201ENST00000333175 COG3Q96JB2 828 aa28.21■■■□□ 2.11
TMEM259-201ENST00000333175 UBR1Q8IWV7 1749 aa28.21■■■□□ 2.11
TMEM259-201ENST00000333175 DEKP35659 375 aaKnown RBP28.21■■■□□ 2.11
TMEM259-201ENST00000333175 RTL5Q5HYW3 569 aaPredicted RBP28.21■■■□□ 2.11
TMEM259-201ENST00000333175 PDZRN3Q9UPQ7 1066 aa28.21■■■□□ 2.11
TMEM259-201ENST00000333175 LTKP29376 864 aa28.2■■■□□ 2.1
TMEM259-201ENST00000333175 IL13P35225 146 aa28.2■■■□□ 2.1
TMEM259-201ENST00000333175 SEC24BO95487 1268 aa28.19■■■□□ 2.1
TMEM259-201ENST00000333175 ATF7IPQ6VMQ6 1270 aa28.19■■■□□ 2.1
TMEM259-201ENST00000333175 TECPR2O15040 1411 aa28.19■■■□□ 2.1
TMEM259-201ENST00000333175 KNDC1Q76NI1 1749 aa28.18■■■□□ 2.1
TMEM259-201ENST00000333175 AAMPQ13685 434 aa28.18■■■□□ 2.1
TMEM259-201ENST00000333175 RWDD1Q9H446 243 aaPredicted RBP28.18■■■□□ 2.1
TMEM259-201ENST00000333175 NFE2L2Q16236 605 aa28.17■■■□□ 2.1
TMEM259-201ENST00000333175 SLC26A8Q96RN1 970 aa28.17■■■□□ 2.1
TMEM259-201ENST00000333175 ADAMTS13Q76LX8 1427 aa28.17■■■□□ 2.1
TMEM259-201ENST00000333175 MON2Q7Z3U7 1717 aa28.15■■■□□ 2.1
TMEM259-201ENST00000333175 TMEM57Q8N5G2 664 aa28.15■■■□□ 2.1
TMEM259-201ENST00000333175 CDK12Q9NYV4 1490 aaPredicted RBP28.14■■■□□ 2.1
TMEM259-201ENST00000333175 VIRMAQ69YN4 1812 aaKnown RBP28.14■■■□□ 2.1
TMEM259-201ENST00000333175 DAXXQ9UER7 740 aaPredicted RBP28.14■■■□□ 2.1
TMEM259-201ENST00000333175 ITSN1Q15811 1721 aa28.13■■■□□ 2.09
TMEM259-201ENST00000333175 ELL2O00472 640 aaPredicted RBP28.12■■■□□ 2.09
TMEM259-201ENST00000333175 SIRT1Q96EB6 747 aa28.12■■■□□ 2.09
TMEM259-201ENST00000333175 AKAP12Q02952 1782 aa28.11■■■□□ 2.09
TMEM259-201ENST00000333175 USP19O94966 1318 aa28.11■■■□□ 2.09
TMEM259-201ENST00000333175 AATKQ6ZMQ8 1374 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms